RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 TOMM7Q9P0U1 55 aa14.39□□□□□ -0.11
YIF1A-202ENST00000376899 C6orf48Q9UBA6 75 aa14.39□□□□□ -0.11
YIF1A-202ENST00000376899 IGKV2-24A0A0C4DH68 120 aa14.38□□□□□ -0.11
YIF1A-202ENST00000376899 H3BRM9 83 aa14.38□□□□□ -0.11
YIF1A-202ENST00000376899 C2orf82Q6UX34 121 aa14.38□□□□□ -0.11
YIF1A-202ENST00000376899 LINC00474Q9P2X8 69 aa14.38□□□□□ -0.11
YIF1A-202ENST00000376899 CHTOPQ9Y3Y2 248 aaKnown RBP14.38□□□□□ -0.11
YIF1A-202ENST00000376899 A0A087WYN8 130 aa14.37□□□□□ -0.11
YIF1A-202ENST00000376899 TRBV30A0A0K0K1B3 111 aa14.37□□□□□ -0.11
YIF1A-202ENST00000376899 C11orf86A6NJI1 115 aa14.37□□□□□ -0.11
YIF1A-202ENST00000376899 EPM2AB3EWF7 344 aa14.37□□□□□ -0.11
YIF1A-202ENST00000376899 SPINK8P0C7L1 97 aa14.37□□□□□ -0.11
YIF1A-202ENST00000376899 PLAC8Q9NZF1 115 aa14.37□□□□□ -0.11
YIF1A-202ENST00000376899 FAT1Q14517 4588 aa14.36□□□□□ -0.11
YIF1A-202ENST00000376899 TLX1NBP0CAT3 122 aa14.36□□□□□ -0.11
YIF1A-202ENST00000376899 PTTG1IPP53801 180 aa14.36□□□□□ -0.11
YIF1A-202ENST00000376899 MAJINQ3KP22 176 aa14.36□□□□□ -0.11
YIF1A-202ENST00000376899 C6orf226Q5I0X4 101 aa14.36□□□□□ -0.11
YIF1A-202ENST00000376899 Q5VSD8 79 aa14.36□□□□□ -0.11
YIF1A-202ENST00000376899 CXCL5P42830 114 aa14.35□□□□□ -0.11
YIF1A-202ENST00000376899 HSPB8Q9UJY1 196 aa14.35□□□□□ -0.11
YIF1A-202ENST00000376899 IGLV5-39A0A0G2JS06 123 aa14.34□□□□□ -0.11
YIF1A-202ENST00000376899 F8VRH5 84 aa14.34□□□□□ -0.11
YIF1A-202ENST00000376899 FAM229AH3BQW9 127 aa14.34□□□□□ -0.11
YIF1A-202ENST00000376899 CKS1BP61024 79 aa14.34□□□□□ -0.11
YIF1A-202ENST00000376899 LINC00528Q8N1L1 170 aa14.34□□□□□ -0.11
YIF1A-202ENST00000376899 COX7B2Q8TF08 81 aa14.34□□□□□ -0.11
YIF1A-202ENST00000376899 COA6Q5JTJ3 125 aaKnown RBP14.33□□□□□ -0.12
YIF1A-202ENST00000376899 RPL18AQ02543 176 aaKnown RBP14.32□□□□□ -0.12
YIF1A-202ENST00000376899 GAGE2BQ13066 116 aa14.32□□□□□ -0.12
YIF1A-202ENST00000376899 ODF1Q14990 250 aa14.32□□□□□ -0.12
YIF1A-202ENST00000376899 DPH3Q96FX2 82 aa14.32□□□□□ -0.12
YIF1A-202ENST00000376899 FABP4P15090 132 aa14.31□□□□□ -0.12
YIF1A-202ENST00000376899 STPG4Q8N801 248 aa14.31□□□□□ -0.12
YIF1A-202ENST00000376899 TMEM170BQ5T4T1 132 aa14.3□□□□□ -0.12
YIF1A-202ENST00000376899 Q6ZRP5 223 aa14.3□□□□□ -0.12
YIF1A-202ENST00000376899 NDUFC2-KCTD14E9PQ53 114 aa14.28□□□□□ -0.12
YIF1A-202ENST00000376899 H0Y8G0 127 aa14.27□□□□□ -0.13
YIF1A-202ENST00000376899 C9orf116Q5BN46 136 aaPredicted RBP14.27□□□□□ -0.13
YIF1A-202ENST00000376899 VPS13BQ7Z7G8 4022 aa14.27□□□□□ -0.13
YIF1A-202ENST00000376899 TMEM223A0PJW6 202 aa14.26□□□□□ -0.13
YIF1A-202ENST00000376899 PLA2G1BP04054 148 aaKnown RBP14.25□□□□□ -0.13
YIF1A-202ENST00000376899 KRTAP10-4P60372 401 aaPredicted RBP14.24□□□□□ -0.13
YIF1A-202ENST00000376899 MAP1LC3CQ9BXW4 147 aa14.24□□□□□ -0.13
YIF1A-202ENST00000376899 A0A1W2PNN7 141 aa14.23□□□□□ -0.13
YIF1A-202ENST00000376899 PLNP26678 52 aa14.22□□□□□ -0.13
YIF1A-202ENST00000376899 GAGE2EQ4V326 116 aa14.22□□□□□ -0.13
YIF1A-202ENST00000376899 GAGE2DQ9UEU5 116 aa14.22□□□□□ -0.13
YIF1A-202ENST00000376899 SYS1-DBNDD2H3BUS1 97 aa14.19□□□□□ -0.14
YIF1A-202ENST00000376899 DPM2O94777 84 aa14.19□□□□□ -0.14
YIF1A-202ENST00000376899 RPL37AP61513 92 aaKnown RBP14.19□□□□□ -0.14
YIF1A-202ENST00000376899 SFTA2Q6UW10 78 aa14.19□□□□□ -0.14
YIF1A-202ENST00000376899 C9orf129Q5T035 196 aaKnown RBP14.18□□□□□ -0.14
YIF1A-202ENST00000376899 C7orf33Q8WU49 177 aa14.18□□□□□ -0.14
YIF1A-202ENST00000376899 ABCA13Q86UQ4 5058 aa14.18□□□□□ -0.14
YIF1A-202ENST00000376899 ZNF625Q96I27 306 aaPredicted RBP14.17□□□□□ -0.14
YIF1A-202ENST00000376899 PMCHL2Q9BQD1 86 aa14.17□□□□□ -0.14
YIF1A-202ENST00000376899 IGKCP01834 107 aa14.16□□□□□ -0.14
YIF1A-202ENST00000376899 FAM168BA1KXE4 195 aa14.15□□□□□ -0.14
YIF1A-202ENST00000376899 INAFM2P0DMQ5 153 aa14.15□□□□□ -0.14
YIF1A-202ENST00000376899 KRTAP7-1Q8IUC3 87 aa14.15□□□□□ -0.14
YIF1A-202ENST00000376899 LINC01545Q5VT33 79 aa14.14□□□□□ -0.15
YIF1A-202ENST00000376899 PET117Q6UWS5 81 aa14.14□□□□□ -0.15
YIF1A-202ENST00000376899 SRRM2Q9UQ35 2752 aaKnown RBP14.13□□□□□ -0.15
YIF1A-202ENST00000376899 PCLOQ9Y6V0 5065 aa14.12□□□□□ -0.15
YIF1A-202ENST00000376899 C3orf79P0CE67 100 aa14.12□□□□□ -0.15
YIF1A-202ENST00000376899 XAGE1AQ9HD64 81 aa14.12□□□□□ -0.15
YIF1A-202ENST00000376899 ERG28Q9UKR5 140 aa14.12□□□□□ -0.15
YIF1A-202ENST00000376899 COX17Q14061 63 aa14.11□□□□□ -0.15
YIF1A-202ENST00000376899 FAM19A5Q7Z5A7 132 aaPredicted RBP14.11□□□□□ -0.15
YIF1A-202ENST00000376899 LEPROTO15243 131 aa14.1□□□□□ -0.15
YIF1A-202ENST00000376899 HERVK_113P61574 105 aa14.1□□□□□ -0.15
YIF1A-202ENST00000376899 PHF5AQ7RTV0 110 aaKnown RBP14.1□□□□□ -0.15
YIF1A-202ENST00000376899 PLEKHB2Q96CS7 222 aa14.09□□□□□ -0.15
YIF1A-202ENST00000376899 PFN2P35080 140 aa14.08□□□□□ -0.16
YIF1A-202ENST00000376899 TSPEAR-AS2P59090 65 aa14.08□□□□□ -0.16
YIF1A-202ENST00000376899 PRR3P79522 188 aaKnown RBP14.08□□□□□ -0.16
YIF1A-202ENST00000376899 HIST3H2BBQ8N257 126 aa14.08□□□□□ -0.16
YIF1A-202ENST00000376899 KRTDAPP60985 99 aa14.07□□□□□ -0.16
YIF1A-202ENST00000376899 HERV-K104P63124 156 aa14.07□□□□□ -0.16
YIF1A-202ENST00000376899 SERTAD4-AS1Q5TG53 156 aa14.07□□□□□ -0.16
YIF1A-202ENST00000376899 NDUFA12Q9UI09 145 aa14.07□□□□□ -0.16
YIF1A-202ENST00000376899 PLA2G2DQ9UNK4 145 aa14.07□□□□□ -0.16
YIF1A-202ENST00000376899 M0QXV9 152 aa14.06□□□□□ -0.16
YIF1A-202ENST00000376899 E9PLD3 99 aa14.04□□□□□ -0.16
YIF1A-202ENST00000376899 J3QQQ9 107 aa14.04□□□□□ -0.16
YIF1A-202ENST00000376899 HNRNPA3P51991 378 aaKnown RBP14.04□□□□□ -0.16
YIF1A-202ENST00000376899 MYMXA0A1B0GTQ4 84 aa14.03□□□□□ -0.16
YIF1A-202ENST00000376899 S100A6P06703 90 aa14.03□□□□□ -0.16
YIF1A-202ENST00000376899 SND1-IT1Q9HBX3 110 aa14.03□□□□□ -0.16
YIF1A-202ENST00000376899 PKHD1L1Q86WI1 4243 aa14.02□□□□□ -0.16
YIF1A-202ENST00000376899 HIST1H2BLQ99880 126 aa14.02□□□□□ -0.17
YIF1A-202ENST00000376899 TP73-AS1Q9UF72 201 aa14.02□□□□□ -0.17
YIF1A-202ENST00000376899 FLG2Q5D862 2391 aaPredicted RBP14.02□□□□□ -0.17
YIF1A-202ENST00000376899 IGLV5-37A0A075B6J1 123 aa14.01□□□□□ -0.17
YIF1A-202ENST00000376899 NMUP48645 174 aa14.01□□□□□ -0.17
YIF1A-202ENST00000376899 C22orf24Q9Y442 160 aa14.01□□□□□ -0.17
YIF1A-202ENST00000376899 C20orf202A1L168 122 aa14□□□□□ -0.17
YIF1A-202ENST00000376899 LGALS3P17931 250 aaKnown RBP14□□□□□ -0.17
YIF1A-202ENST00000376899 S100A2P29034 98 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms