RNA–Protein interactions for RNA: ENST00000376745.8

PPP1CA-203, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CA, Length 1,476 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-203ENST00000376745 LOC107984640A0A0U1RRK4 108 aa21.08■□□□□ 0.97
PPP1CA-203ENST00000376745 PRSS2P07478 247 aa21.08■□□□□ 0.97
PPP1CA-203ENST00000376745 ZNF22P17026 224 aaPredicted RBP21.08■□□□□ 0.97
PPP1CA-203ENST00000376745 CHTOPQ9Y3Y2 248 aaKnown RBP21.08■□□□□ 0.97
PPP1CA-203ENST00000376745 IGKV2-24A0A0C4DH68 120 aa21.07■□□□□ 0.96
PPP1CA-203ENST00000376745 H3BRM9 83 aa21.07■□□□□ 0.96
PPP1CA-203ENST00000376745 C6orf226Q5I0X4 101 aa21.07■□□□□ 0.96
PPP1CA-203ENST00000376745 C11orf86A6NJI1 115 aa21.07■□□□□ 0.96
PPP1CA-203ENST00000376745 SPINK8P0C7L1 97 aa21.07■□□□□ 0.96
PPP1CA-203ENST00000376745 A0A087WYN8 130 aa21.05■□□□□ 0.96
PPP1CA-203ENST00000376745 LINC00474Q9P2X8 69 aa21.05■□□□□ 0.96
PPP1CA-203ENST00000376745 TRBV30A0A0K0K1B3 111 aa21.04■□□□□ 0.96
PPP1CA-203ENST00000376745 PTTG1IPP53801 180 aa21.04■□□□□ 0.96
PPP1CA-203ENST00000376745 DPH3Q96FX2 82 aa21.04■□□□□ 0.96
PPP1CA-203ENST00000376745 HSPB8Q9UJY1 196 aa21.04■□□□□ 0.96
PPP1CA-203ENST00000376745 CKS1BP61024 79 aa21.03■□□□□ 0.96
PPP1CA-203ENST00000376745 MAJINQ3KP22 176 aa21.03■□□□□ 0.96
PPP1CA-203ENST00000376745 F8VRH5 84 aa21.02■□□□□ 0.96
PPP1CA-203ENST00000376745 TLX1NBP0CAT3 122 aa21.02■□□□□ 0.96
PPP1CA-203ENST00000376745 FABP4P15090 132 aa21.02■□□□□ 0.96
PPP1CA-203ENST00000376745 COA6Q5JTJ3 125 aaKnown RBP21.02■□□□□ 0.96
PPP1CA-203ENST00000376745 PLAC8Q9NZF1 115 aa21.02■□□□□ 0.96
PPP1CA-203ENST00000376745 IGLV5-39A0A0G2JS06 123 aa21.01■□□□□ 0.95
PPP1CA-203ENST00000376745 EPM2AB3EWF7 344 aa21.01■□□□□ 0.95
PPP1CA-203ENST00000376745 Q5VSD8 79 aa21.01■□□□□ 0.95
PPP1CA-203ENST00000376745 COX7B2Q8TF08 81 aa21.01■□□□□ 0.95
PPP1CA-203ENST00000376745 GAGE2BQ13066 116 aa21■□□□□ 0.95
PPP1CA-203ENST00000376745 CXCL5P42830 114 aa20.99■□□□□ 0.95
PPP1CA-203ENST00000376745 ODF1Q14990 250 aa20.99■□□□□ 0.95
PPP1CA-203ENST00000376745 LINC00528Q8N1L1 170 aa20.99■□□□□ 0.95
PPP1CA-203ENST00000376745 TMEM170BQ5T4T1 132 aa20.98■□□□□ 0.95
PPP1CA-203ENST00000376745 FAM229AH3BQW9 127 aa20.97■□□□□ 0.95
PPP1CA-203ENST00000376745 RPL18AQ02543 176 aaKnown RBP20.97■□□□□ 0.95
PPP1CA-203ENST00000376745 STPG4Q8N801 248 aa20.96■□□□□ 0.95
PPP1CA-203ENST00000376745 C9orf116Q5BN46 136 aaPredicted RBP20.95■□□□□ 0.94
PPP1CA-203ENST00000376745 Q6ZRP5 223 aa20.95■□□□□ 0.94
PPP1CA-203ENST00000376745 H0Y8G0 127 aa20.94■□□□□ 0.94
PPP1CA-203ENST00000376745 NDUFC2-KCTD14E9PQ53 114 aa20.91■□□□□ 0.94
PPP1CA-203ENST00000376745 TMEM223A0PJW6 202 aa20.9■□□□□ 0.94
PPP1CA-203ENST00000376745 MAP1LC3CQ9BXW4 147 aa20.89■□□□□ 0.94
PPP1CA-203ENST00000376745 ABCA13Q86UQ4 5058 aa20.88■□□□□ 0.93
PPP1CA-203ENST00000376745 A0A1W2PNN7 141 aa20.86■□□□□ 0.93
PPP1CA-203ENST00000376745 GAGE2EQ4V326 116 aa20.86■□□□□ 0.93
PPP1CA-203ENST00000376745 GAGE2DQ9UEU5 116 aa20.86■□□□□ 0.93
PPP1CA-203ENST00000376745 PLA2G1BP04054 148 aaKnown RBP20.85■□□□□ 0.93
PPP1CA-203ENST00000376745 PLNP26678 52 aa20.84■□□□□ 0.93
PPP1CA-203ENST00000376745 KRTAP10-4P60372 401 aaPredicted RBP20.84■□□□□ 0.93
PPP1CA-203ENST00000376745 SYS1-DBNDD2H3BUS1 97 aa20.82■□□□□ 0.92
PPP1CA-203ENST00000376745 PCLOQ9Y6V0 5065 aa20.82■□□□□ 0.92
PPP1CA-203ENST00000376745 SRRM2Q9UQ35 2752 aaKnown RBP20.82■□□□□ 0.92
PPP1CA-203ENST00000376745 PMCHL2Q9BQD1 86 aa20.81■□□□□ 0.92
PPP1CA-203ENST00000376745 DPM2O94777 84 aa20.81■□□□□ 0.92
PPP1CA-203ENST00000376745 VPS13BQ7Z7G8 4022 aa20.8■□□□□ 0.92
PPP1CA-203ENST00000376745 C9orf129Q5T035 196 aaKnown RBP20.79■□□□□ 0.92
PPP1CA-203ENST00000376745 IGKCP01834 107 aa20.77■□□□□ 0.92
PPP1CA-203ENST00000376745 ZNF625Q96I27 306 aaPredicted RBP20.77■□□□□ 0.92
PPP1CA-203ENST00000376745 RPL37AP61513 92 aaKnown RBP20.76■□□□□ 0.91
PPP1CA-203ENST00000376745 FAM168BA1KXE4 195 aa20.75■□□□□ 0.91
PPP1CA-203ENST00000376745 SFTA2Q6UW10 78 aa20.75■□□□□ 0.91
PPP1CA-203ENST00000376745 C7orf33Q8WU49 177 aa20.75■□□□□ 0.91
PPP1CA-203ENST00000376745 PET117Q6UWS5 81 aa20.74■□□□□ 0.91
PPP1CA-203ENST00000376745 KRTAP7-1Q8IUC3 87 aa20.74■□□□□ 0.91
PPP1CA-203ENST00000376745 LINC01545Q5VT33 79 aa20.73■□□□□ 0.91
PPP1CA-203ENST00000376745 C3orf79P0CE67 100 aa20.72■□□□□ 0.91
PPP1CA-203ENST00000376745 XAGE1AQ9HD64 81 aa20.72■□□□□ 0.91
PPP1CA-203ENST00000376745 INAFM2P0DMQ5 153 aa20.7■□□□□ 0.9
PPP1CA-203ENST00000376745 ERG28Q9UKR5 140 aa20.69■□□□□ 0.9
PPP1CA-203ENST00000376745 FAM19A5Q7Z5A7 132 aaPredicted RBP20.68■□□□□ 0.9
PPP1CA-203ENST00000376745 COX17Q14061 63 aa20.67■□□□□ 0.9
PPP1CA-203ENST00000376745 LEPROTO15243 131 aa20.66■□□□□ 0.9
PPP1CA-203ENST00000376745 PFN2P35080 140 aa20.66■□□□□ 0.9
PPP1CA-203ENST00000376745 HERVK_113P61574 105 aa20.65■□□□□ 0.9
PPP1CA-203ENST00000376745 PHF5AQ7RTV0 110 aaKnown RBP20.65■□□□□ 0.9
PPP1CA-203ENST00000376745 HIST3H2BBQ8N257 126 aa20.65■□□□□ 0.9
PPP1CA-203ENST00000376745 TSPEAR-AS2P59090 65 aa20.64■□□□□ 0.89
PPP1CA-203ENST00000376745 KRTDAPP60985 99 aa20.64■□□□□ 0.89
PPP1CA-203ENST00000376745 PLEKHB2Q96CS7 222 aa20.63■□□□□ 0.89
PPP1CA-203ENST00000376745 NDUFA12Q9UI09 145 aa20.62■□□□□ 0.89
PPP1CA-203ENST00000376745 SERTAD4-AS1Q5TG53 156 aa20.62■□□□□ 0.89
PPP1CA-203ENST00000376745 S100A6P06703 90 aa20.6■□□□□ 0.89
PPP1CA-203ENST00000376745 J3QQQ9 107 aa20.59■□□□□ 0.89
PPP1CA-203ENST00000376745 M0QXV9 152 aa20.59■□□□□ 0.89
PPP1CA-203ENST00000376745 HERV-K104P63124 156 aa20.59■□□□□ 0.89
PPP1CA-203ENST00000376745 PRR3P79522 188 aaKnown RBP20.59■□□□□ 0.89
PPP1CA-203ENST00000376745 HIST1H2BLQ99880 126 aa20.59■□□□□ 0.89
PPP1CA-203ENST00000376745 FLG2Q5D862 2391 aaPredicted RBP20.58■□□□□ 0.88
PPP1CA-203ENST00000376745 E9PLD3 99 aa20.57■□□□□ 0.88
PPP1CA-203ENST00000376745 PLA2G2DQ9UNK4 145 aa20.57■□□□□ 0.88
PPP1CA-203ENST00000376745 MYMXA0A1B0GTQ4 84 aa20.56■□□□□ 0.88
PPP1CA-203ENST00000376745 HNRNPA3P51991 378 aaKnown RBP20.56■□□□□ 0.88
PPP1CA-203ENST00000376745 SND1-IT1Q9HBX3 110 aa20.56■□□□□ 0.88
PPP1CA-203ENST00000376745 S100A2P29034 98 aa20.55■□□□□ 0.88
PPP1CA-203ENST00000376745 C22orf24Q9Y442 160 aa20.54■□□□□ 0.88
PPP1CA-203ENST00000376745 NMUP48645 174 aa20.53■□□□□ 0.88
PPP1CA-203ENST00000376745 LINC00158P58513 81 aa20.53■□□□□ 0.88
PPP1CA-203ENST00000376745 KRTAP11-1Q8IUC1 163 aa20.53■□□□□ 0.88
PPP1CA-203ENST00000376745 SNRPEP62304 92 aaKnown RBP20.52■□□□□ 0.88
PPP1CA-203ENST00000376745 C20orf202A1L168 122 aa20.51■□□□□ 0.87
PPP1CA-203ENST00000376745 LGALS3P17931 250 aaKnown RBP20.51■□□□□ 0.87
PPP1CA-203ENST00000376745 TP73-AS1Q9UF72 201 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms