RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 SDIM1Q6ZPB5 146 aa8.92□□□□□ -0.98
NSMCE1-201ENST00000361439 Q6ZRU5 148 aa8.92□□□□□ -0.98
NSMCE1-201ENST00000361439 COX7B2Q8TF08 81 aa8.92□□□□□ -0.98
NSMCE1-201ENST00000361439 HIST1H2BLQ99880 126 aa8.92□□□□□ -0.98
NSMCE1-201ENST00000361439 TOMM7Q9P0U1 55 aa8.92□□□□□ -0.98
NSMCE1-201ENST00000361439 LRP1BQ9NZR2 4599 aa8.91□□□□□ -0.98
NSMCE1-201ENST00000361439 C20orf202A1L168 122 aa8.91□□□□□ -0.98
NSMCE1-201ENST00000361439 CDK2AP2O75956 126 aa8.91□□□□□ -0.98
NSMCE1-201ENST00000361439 Q6ZSA8 131 aa8.91□□□□□ -0.98
NSMCE1-201ENST00000361439 LINC00474Q9P2X8 69 aa8.91□□□□□ -0.98
NSMCE1-201ENST00000361439 KRTDAPP60985 99 aa8.9□□□□□ -0.98
NSMCE1-201ENST00000361439 TLX1NBP0CAT3 122 aa8.89□□□□□ -0.99
NSMCE1-201ENST00000361439 HERVK_113P61574 105 aa8.89□□□□□ -0.99
NSMCE1-201ENST00000361439 UNQ6190/PRO20217Q6UXQ8 127 aa8.89□□□□□ -0.99
NSMCE1-201ENST00000361439 LOC107984640A0A0U1RRK4 108 aa8.88□□□□□ -0.99
NSMCE1-201ENST00000361439 LINC01620Q4KN68 170 aa8.88□□□□□ -0.99
NSMCE1-201ENST00000361439 C2orf82Q6UX34 121 aa8.88□□□□□ -0.99
NSMCE1-201ENST00000361439 CIRBPQ14011 172 aaKnown RBP8.87□□□□□ -0.99
NSMCE1-201ENST00000361439 C10orf25Q5T742 122 aa8.87□□□□□ -0.99
NSMCE1-201ENST00000361439 PMCHL2Q9BQD1 86 aa8.87□□□□□ -0.99
NSMCE1-201ENST00000361439 C6orf48Q9UBA6 75 aa8.87□□□□□ -0.99
NSMCE1-201ENST00000361439 PLEKHB2Q96CS7 222 aa8.86□□□□□ -0.99
NSMCE1-201ENST00000361439 BIRC6Q9NR09 4857 aa8.85□□□□□ -0.99
NSMCE1-201ENST00000361439 LEPROTO15243 131 aa8.85□□□□□ -0.99
NSMCE1-201ENST00000361439 E9PLD3 99 aa8.84□□□□□ -0.99
NSMCE1-201ENST00000361439 NDUFC2-KCTD14E9PQ53 114 aa8.84□□□□□ -0.99
NSMCE1-201ENST00000361439 NMUP48645 174 aa8.84□□□□□ -0.99
NSMCE1-201ENST00000361439 PTTG1IPP53801 180 aa8.84□□□□□ -0.99
NSMCE1-201ENST00000361439 COX17Q14061 63 aa8.84□□□□□ -0.99
NSMCE1-201ENST00000361439 ZNF625Q96I27 306 aaPredicted RBP8.84□□□□□ -0.99
NSMCE1-201ENST00000361439 FAM30AQ9NZY2 134 aa8.84□□□□□ -0.99
NSMCE1-201ENST00000361439 DNAH8Q96JB1 4490 aa8.83□□□□□ -1
NSMCE1-201ENST00000361439 HERV-K104P63124 156 aa8.83□□□□□ -1
NSMCE1-201ENST00000361439 SPACA4Q8TDM5 124 aa8.83□□□□□ -1
NSMCE1-201ENST00000361439 A0A096LNI7 61 aa8.82□□□□□ -1
NSMCE1-201ENST00000361439 LINC00587B1AMM8 73 aa8.82□□□□□ -1
NSMCE1-201ENST00000361439 J3QQQ9 107 aa8.82□□□□□ -1
NSMCE1-201ENST00000361439 RPL18AQ02543 176 aaKnown RBP8.82□□□□□ -1
NSMCE1-201ENST00000361439 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.82□□□□□ -1
NSMCE1-201ENST00000361439 MYMXA0A1B0GTQ4 84 aa8.81□□□□□ -1
NSMCE1-201ENST00000361439 XGP55808 180 aa8.81□□□□□ -1
NSMCE1-201ENST00000361439 Q6ZRP5 223 aa8.81□□□□□ -1
NSMCE1-201ENST00000361439 NDUFA12Q9UI09 145 aa8.81□□□□□ -1
NSMCE1-201ENST00000361439 IGKV2-24A0A0C4DH68 120 aa8.8□□□□□ -1
NSMCE1-201ENST00000361439 LGALS3P17931 250 aaKnown RBP8.8□□□□□ -1
NSMCE1-201ENST00000361439 GAGE2BQ13066 116 aa8.8□□□□□ -1
NSMCE1-201ENST00000361439 C9orf116Q5BN46 136 aaPredicted RBP8.8□□□□□ -1
NSMCE1-201ENST00000361439 DPH3Q96FX2 82 aa8.8□□□□□ -1
NSMCE1-201ENST00000361439 MAJINQ3KP22 176 aa8.79□□□□□ -1
NSMCE1-201ENST00000361439 SCXQ7RTU7 201 aa8.79□□□□□ -1
NSMCE1-201ENST00000361439 STPG4Q8N801 248 aa8.79□□□□□ -1
NSMCE1-201ENST00000361439 CIRBP-AS1Q8TBR5 109 aa8.79□□□□□ -1
NSMCE1-201ENST00000361439 PLAC8Q9NZF1 115 aa8.79□□□□□ -1
NSMCE1-201ENST00000361439 ERG28Q9UKR5 140 aa8.79□□□□□ -1
NSMCE1-201ENST00000361439 APOBP04114 4563 aaKnown RBP8.79□□□□□ -1
NSMCE1-201ENST00000361439 EPM2AB3EWF7 344 aa8.78□□□□□ -1
NSMCE1-201ENST00000361439 PANO1I0J062 215 aa8.78□□□□□ -1
NSMCE1-201ENST00000361439 CHTF8P0CG12 524 aa8.78□□□□□ -1
NSMCE1-201ENST00000361439 TMA7Q9Y2S6 64 aaKnown RBP8.78□□□□□ -1
NSMCE1-201ENST00000361439 KIAA1109Q2LD37 5005 aa8.78□□□□□ -1
NSMCE1-201ENST00000361439 A0A087WYN8 130 aa8.77□□□□□ -1.01
NSMCE1-201ENST00000361439 TSPEAR-AS2P59090 65 aa8.77□□□□□ -1.01
NSMCE1-201ENST00000361439 HSBP1L1C9JCN9 74 aa8.76□□□□□ -1.01
NSMCE1-201ENST00000361439 SCGB1D1O95968 90 aa8.76□□□□□ -1.01
NSMCE1-201ENST00000361439 GAGE2EQ4V326 116 aa8.76□□□□□ -1.01
NSMCE1-201ENST00000361439 GAGE2DQ9UEU5 116 aa8.76□□□□□ -1.01
NSMCE1-201ENST00000361439 RYR1P21817 5038 aa8.75□□□□□ -1.01
NSMCE1-201ENST00000361439 PFN2P35080 140 aa8.74□□□□□ -1.01
NSMCE1-201ENST00000361439 ATOH7Q8N100 152 aa8.74□□□□□ -1.01
NSMCE1-201ENST00000361439 LINC00158P58513 81 aa8.73□□□□□ -1.01
NSMCE1-201ENST00000361439 JOSD1Q15040 202 aaPredicted RBP8.73□□□□□ -1.01
NSMCE1-201ENST00000361439 MEIG1Q5JSS6 88 aa8.73□□□□□ -1.01
NSMCE1-201ENST00000361439 C9orf129Q5T035 196 aaKnown RBP8.73□□□□□ -1.01
NSMCE1-201ENST00000361439 PLA2G2DQ9UNK4 145 aa8.73□□□□□ -1.01
NSMCE1-201ENST00000361439 HSPG2P98160 4391 aa8.73□□□□□ -1.01
NSMCE1-201ENST00000361439 IGKV2D-26A0A0A0MRZ7 120 aa8.72□□□□□ -1.01
NSMCE1-201ENST00000361439 ANKRD39Q53RE8 183 aa8.72□□□□□ -1.01
NSMCE1-201ENST00000361439 A0A1W2PNN7 141 aa8.71□□□□□ -1.02
NSMCE1-201ENST00000361439 Q8N1X5 172 aa8.71□□□□□ -1.02
NSMCE1-201ENST00000361439 SND1-IT1Q9HBX3 110 aa8.71□□□□□ -1.02
NSMCE1-201ENST00000361439 XAGE1AQ9HD64 81 aa8.71□□□□□ -1.02
NSMCE1-201ENST00000361439 A0A0J9YXY3 114 aa8.7□□□□□ -1.02
NSMCE1-201ENST00000361439 ZNF815PA8K554 130 aa8.7□□□□□ -1.02
NSMCE1-201ENST00000361439 TIMM17BO60830 172 aa8.7□□□□□ -1.02
NSMCE1-201ENST00000361439 SMIM13P0DJ93 91 aa8.7□□□□□ -1.02
NSMCE1-201ENST00000361439 HAMPP81172 84 aa8.7□□□□□ -1.02
NSMCE1-201ENST00000361439 C7orf33Q8WU49 177 aa8.7□□□□□ -1.02
NSMCE1-201ENST00000361439 LOC107984156A0A0G2JMH3 177 aa8.69□□□□□ -1.02
NSMCE1-201ENST00000361439 FAM229AH3BQW9 127 aa8.69□□□□□ -1.02
NSMCE1-201ENST00000361439 ARL17AQ8IVW1 177 aa8.69□□□□□ -1.02
NSMCE1-201ENST00000361439 TP73-AS1Q9UF72 201 aa8.69□□□□□ -1.02
NSMCE1-201ENST00000361439 IGLV5-37A0A075B6J1 123 aa8.68□□□□□ -1.02
NSMCE1-201ENST00000361439 RPL24P83731 157 aaKnown RBP8.68□□□□□ -1.02
NSMCE1-201ENST00000361439 MIR7-3HGQ8N6C7 128 aa8.68□□□□□ -1.02
NSMCE1-201ENST00000361439 FAM168BA1KXE4 195 aa8.67□□□□□ -1.02
NSMCE1-201ENST00000361439 SMR3BP02814 79 aaPredicted RBP8.67□□□□□ -1.02
NSMCE1-201ENST00000361439 FAM19A5Q7Z5A7 132 aaPredicted RBP8.67□□□□□ -1.02
NSMCE1-201ENST00000361439 LINC00528Q8N1L1 170 aa8.67□□□□□ -1.02
NSMCE1-201ENST00000361439 A0A0U1RRA0 63 aa8.66□□□□□ -1.02
NSMCE1-201ENST00000361439 M0QXV9 152 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms