RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 LINC01006Q8NI28 216 aa13.62□□□□□ -0.23
BRPF3-202ENST00000357641 LINC00474Q9P2X8 69 aa13.61□□□□□ -0.23
BRPF3-202ENST00000357641 FHL2Q14192 279 aa13.61□□□□□ -0.23
BRPF3-202ENST00000357641 ODF3L2Q3SX64 289 aa13.61□□□□□ -0.23
BRPF3-202ENST00000357641 LINC01546A6NGU7 62 aa13.61□□□□□ -0.23
BRPF3-202ENST00000357641 A0A1B0GU69 56 aa13.6□□□□□ -0.23
BRPF3-202ENST00000357641 VPREB1P12018 145 aa13.6□□□□□ -0.23
BRPF3-202ENST00000357641 FAM218AQ96MZ4 157 aa13.59□□□□□ -0.23
BRPF3-202ENST00000357641 BCE1O60756 84 aa13.57□□□□□ -0.24
BRPF3-202ENST00000357641 FAM19A4Q96LR4 140 aa13.55□□□□□ -0.24
BRPF3-202ENST00000357641 INAFM1C9JVW0 142 aa13.54□□□□□ -0.24
BRPF3-202ENST00000357641 KIAA0087Q14695 138 aa13.53□□□□□ -0.24
BRPF3-202ENST00000357641 IGLV5-39A0A0G2JS06 123 aa13.52□□□□□ -0.25
BRPF3-202ENST00000357641 TM2D3Q9BRN9 247 aa13.52□□□□□ -0.25
BRPF3-202ENST00000357641 SORL1Q92673 2214 aa13.52□□□□□ -0.25
BRPF3-202ENST00000357641 KIF25-AS1Q9Y6Z4 181 aa13.5□□□□□ -0.25
BRPF3-202ENST00000357641 FSHBP01225 129 aa13.5□□□□□ -0.25
BRPF3-202ENST00000357641 A0A1B0GUV1 79 aa13.49□□□□□ -0.25
BRPF3-202ENST00000357641 PRLHP81277 87 aa13.49□□□□□ -0.25
BRPF3-202ENST00000357641 C8orf87E5RJ46 101 aa13.48□□□□□ -0.25
BRPF3-202ENST00000357641 Q6ZTC4 211 aa13.48□□□□□ -0.25
BRPF3-202ENST00000357641 Q6ZRU5 148 aa13.48□□□□□ -0.25
BRPF3-202ENST00000357641 C7orf65Q6ZTY9 151 aa13.47□□□□□ -0.25
BRPF3-202ENST00000357641 LINC01561Q8N1V8 128 aa13.47□□□□□ -0.25
BRPF3-202ENST00000357641 Q6ZQT0 140 aa13.46□□□□□ -0.25
BRPF3-202ENST00000357641 LINC01556Q5JQF7 62 aa13.46□□□□□ -0.26
BRPF3-202ENST00000357641 SMCR5Q8TEV8 140 aa13.46□□□□□ -0.26
BRPF3-202ENST00000357641 C2orf48Q96LS8 159 aa13.45□□□□□ -0.26
BRPF3-202ENST00000357641 IGKV2D-30A0A075B6S6 120 aa13.45□□□□□ -0.26
BRPF3-202ENST00000357641 IGKV2-30P06310 120 aa13.45□□□□□ -0.26
BRPF3-202ENST00000357641 ATP11AUNQ6ZP68 121 aa13.44□□□□□ -0.26
BRPF3-202ENST00000357641 AVPP01185 164 aa13.44□□□□□ -0.26
BRPF3-202ENST00000357641 ACYP2P14621 99 aa13.44□□□□□ -0.26
BRPF3-202ENST00000357641 PTPRQQ9UMZ3 2332 aa13.43□□□□□ -0.26
BRPF3-202ENST00000357641 PLA2G2AP14555 144 aa13.43□□□□□ -0.26
BRPF3-202ENST00000357641 C6orf48Q9UBA6 75 aa13.41□□□□□ -0.26
BRPF3-202ENST00000357641 F8WDY8 70 aa13.4□□□□□ -0.26
BRPF3-202ENST00000357641 SPINT4Q6UDR6 99 aa13.4□□□□□ -0.26
BRPF3-202ENST00000357641 NAV3Q8IVL0 2385 aa13.4□□□□□ -0.26
BRPF3-202ENST00000357641 TECTAO75443 2155 aa13.39□□□□□ -0.27
BRPF3-202ENST00000357641 C22orf24Q9Y442 160 aa13.39□□□□□ -0.27
BRPF3-202ENST00000357641 COL5A1P20908 1838 aaPredicted RBP13.39□□□□□ -0.27
BRPF3-202ENST00000357641 A8MUN3 132 aa13.38□□□□□ -0.27
BRPF3-202ENST00000357641 LOC110117498A0A087WWA1 95 aa13.38□□□□□ -0.27
BRPF3-202ENST00000357641 LINC00315P59091 139 aa13.38□□□□□ -0.27
BRPF3-202ENST00000357641 TP53AIP1Q9HCN2 124 aa13.38□□□□□ -0.27
BRPF3-202ENST00000357641 PRRC2AP48634 2157 aaKnown RBP13.37□□□□□ -0.27
BRPF3-202ENST00000357641 LYPD5Q6UWN5 251 aa13.37□□□□□ -0.27
BRPF3-202ENST00000357641 FAM208BQ5VWN6 2430 aa13.37□□□□□ -0.27
BRPF3-202ENST00000357641 IGLV8-61A0A075B6I0 122 aa13.36□□□□□ -0.27
BRPF3-202ENST00000357641 IGLV1-51P01701 117 aa13.36□□□□□ -0.27
BRPF3-202ENST00000357641 BRI3O95415 125 aa13.36□□□□□ -0.27
BRPF3-202ENST00000357641 ANKHD1Q8IWZ3 2542 aaKnown RBP13.36□□□□□ -0.27
BRPF3-202ENST00000357641 LY6G6CO95867 125 aa13.36□□□□□ -0.27
BRPF3-202ENST00000357641 C2CD3Q4AC94 2353 aa13.36□□□□□ -0.27
BRPF3-202ENST00000357641 OXLD1Q5BKU9 147 aa13.36□□□□□ -0.27
BRPF3-202ENST00000357641 IGHV3OR16-9A0A0B4J2B5 98 aa13.36□□□□□ -0.27
BRPF3-202ENST00000357641 FHL3Q13643 280 aa13.36□□□□□ -0.27
BRPF3-202ENST00000357641 DSCAMO60469 2012 aa13.35□□□□□ -0.27
BRPF3-202ENST00000357641 NHLRC4P0CG21 123 aaPredicted RBP13.35□□□□□ -0.27
BRPF3-202ENST00000357641 C11orf72Q8NBR9 251 aa13.35□□□□□ -0.27
BRPF3-202ENST00000357641 LY6G6DO95868 133 aa13.35□□□□□ -0.27
BRPF3-202ENST00000357641 AGRNO00468 2067 aa13.33□□□□□ -0.28
BRPF3-202ENST00000357641 CDSNQ15517 529 aa13.33□□□□□ -0.28
BRPF3-202ENST00000357641 HIVEP2P31629 2446 aa13.33□□□□□ -0.28
BRPF3-202ENST00000357641 LINC00336Q6ZUF6 198 aa13.33□□□□□ -0.28
BRPF3-202ENST00000357641 CEP192Q8TEP8 1941 aa13.32□□□□□ -0.28
BRPF3-202ENST00000357641 H3BPC8 53 aa13.32□□□□□ -0.28
BRPF3-202ENST00000357641 IGLV5-45A0A087WSX0 123 aa13.31□□□□□ -0.28
BRPF3-202ENST00000357641 ELOF1P60002 83 aaKnown RBP13.31□□□□□ -0.28
BRPF3-202ENST00000357641 CSPG4Q6UVK1 2322 aa13.31□□□□□ -0.28
BRPF3-202ENST00000357641 ATRXP46100 2492 aa13.29□□□□□ -0.28
BRPF3-202ENST00000357641 IGLV5-52A0A0A0MRZ9 124 aa13.29□□□□□ -0.28
BRPF3-202ENST00000357641 RPL37AP61513 92 aaKnown RBP13.28□□□□□ -0.28
BRPF3-202ENST00000357641 TRAV22A0A0B4J277 110 aa13.27□□□□□ -0.28
BRPF3-202ENST00000357641 MDFIQ99750 246 aa13.26□□□□□ -0.29
BRPF3-202ENST00000357641 SPG11Q96JI7 2443 aa13.26□□□□□ -0.29
BRPF3-202ENST00000357641 CD164Q04900 197 aa13.26□□□□□ -0.29
BRPF3-202ENST00000357641 LINC00167Q96N53 147 aa13.26□□□□□ -0.29
BRPF3-202ENST00000357641 ZFHX2Q9C0A1 2572 aaPredicted RBP13.25□□□□□ -0.29
BRPF3-202ENST00000357641 Q8NBF4 154 aa13.25□□□□□ -0.29
BRPF3-202ENST00000357641 A0A1B0GW54 56 aa13.24□□□□□ -0.29
BRPF3-202ENST00000357641 LINC00476Q8WZB0 136 aa13.24□□□□□ -0.29
BRPF3-202ENST00000357641 COA5Q86WW8 74 aa13.23□□□□□ -0.29
BRPF3-202ENST00000357641 EXPH5Q8NEV8 1989 aa13.23□□□□□ -0.29
BRPF3-202ENST00000357641 LITAFQ99732 161 aa13.22□□□□□ -0.29
BRPF3-202ENST00000357641 CYP4F30PQ9H0H9 118 aa13.22□□□□□ -0.29
BRPF3-202ENST00000357641 SSBP3-AS1Q7Z2R9 100 aa13.21□□□□□ -0.3
BRPF3-202ENST00000357641 COL4A4P53420 1690 aaPredicted RBP13.21□□□□□ -0.3
BRPF3-202ENST00000357641 LTBP2Q14767 1821 aa13.2□□□□□ -0.3
BRPF3-202ENST00000357641 NUPR2A6NF83 97 aa13.2□□□□□ -0.3
BRPF3-202ENST00000357641 MOBPQ13875 183 aa13.2□□□□□ -0.3
BRPF3-202ENST00000357641 MUC22E2RYF6 1773 aaPredicted RBP13.19□□□□□ -0.3
BRPF3-202ENST00000357641 ERC2-IT1O76042 136 aa13.19□□□□□ -0.3
BRPF3-202ENST00000357641 ST20-AS1Q8NBB2 130 aa13.19□□□□□ -0.3
BRPF3-202ENST00000357641 RAI1Q7Z5J4 1906 aaPredicted RBP13.18□□□□□ -0.3
BRPF3-202ENST00000357641 CPAMD8Q8IZJ3 1885 aa13.17□□□□□ -0.3
BRPF3-202ENST00000357641 TRBV7-4A0A0J9YYF1 115 aa13.17□□□□□ -0.3
BRPF3-202ENST00000357641 LRP4O75096 1905 aa13.16□□□□□ -0.3
BRPF3-202ENST00000357641 OTOGLQ3ZCN5 2332 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms