RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 TOMM7Q9P0U1 55 aa10.34□□□□□ -0.75
FDPS-201ENST00000356657 DYNC1H1Q14204 4646 aaKnown RBP10.34□□□□□ -0.75
FDPS-201ENST00000356657 C3orf79P0CE67 100 aa10.33□□□□□ -0.76
FDPS-201ENST00000356657 FUSP35637 526 aaKnown RBP eCLIP10.33□□□□□ -0.767e-9■■□□□ 14.3
FDPS-201ENST00000356657 Q6ZRU5 148 aa10.33□□□□□ -0.76
FDPS-201ENST00000356657 LINC00526Q96FQ7 95 aa10.33□□□□□ -0.76
FDPS-201ENST00000356657 TMEM223A0PJW6 202 aa10.32□□□□□ -0.76
FDPS-201ENST00000356657 KRTDAPP60985 99 aa10.32□□□□□ -0.76
FDPS-201ENST00000356657 HERVK_113P61574 105 aa10.32□□□□□ -0.76
FDPS-201ENST00000356657 CDK2AP2O75956 126 aa10.31□□□□□ -0.76
FDPS-201ENST00000356657 KRTAP10-1P60331 282 aa10.31□□□□□ -0.76
FDPS-201ENST00000356657 SDIM1Q6ZPB5 146 aa10.31□□□□□ -0.76
FDPS-201ENST00000356657 Q6ZSA8 131 aa10.31□□□□□ -0.76
FDPS-201ENST00000356657 LINC00474Q9P2X8 69 aa10.31□□□□□ -0.76
FDPS-201ENST00000356657 LRP1BQ9NZR2 4599 aa10.3□□□□□ -0.76
FDPS-201ENST00000356657 KIAA1109Q2LD37 5005 aa10.3□□□□□ -0.76
FDPS-201ENST00000356657 LOC107984640A0A0U1RRK4 108 aa10.3□□□□□ -0.76
FDPS-201ENST00000356657 TLX1NBP0CAT3 122 aa10.29□□□□□ -0.76
FDPS-201ENST00000356657 UNQ6190/PRO20217Q6UXQ8 127 aa10.29□□□□□ -0.76
FDPS-201ENST00000356657 C2orf82Q6UX34 121 aa10.28□□□□□ -0.76
FDPS-201ENST00000356657 PMCHL2Q9BQD1 86 aa10.28□□□□□ -0.76
FDPS-201ENST00000356657 HERC2O95714 4834 aa10.27□□□□□ -0.77
FDPS-201ENST00000356657 CIRBPQ14011 172 aaKnown RBP10.27□□□□□ -0.77
FDPS-201ENST00000356657 LINC01620Q4KN68 170 aa10.27□□□□□ -0.77
FDPS-201ENST00000356657 PLEKHB2Q96CS7 222 aa10.27□□□□□ -0.77
FDPS-201ENST00000356657 C6orf48Q9UBA6 75 aa10.27□□□□□ -0.77
FDPS-201ENST00000356657 C10orf25Q5T742 122 aa10.26□□□□□ -0.77
FDPS-201ENST00000356657 NDUFC2-KCTD14E9PQ53 114 aa10.25□□□□□ -0.77
FDPS-201ENST00000356657 LEPROTO15243 131 aa10.24□□□□□ -0.77
FDPS-201ENST00000356657 NMUP48645 174 aa10.24□□□□□ -0.77
FDPS-201ENST00000356657 E9PLD3 99 aa10.23□□□□□ -0.77
FDPS-201ENST00000356657 PTTG1IPP53801 180 aa10.23□□□□□ -0.77
FDPS-201ENST00000356657 HERV-K104P63124 156 aa10.23□□□□□ -0.77
FDPS-201ENST00000356657 COX17Q14061 63 aa10.23□□□□□ -0.77
FDPS-201ENST00000356657 SPACA4Q8TDM5 124 aa10.23□□□□□ -0.77
FDPS-201ENST00000356657 ZNF625Q96I27 306 aaPredicted RBP10.23□□□□□ -0.77
FDPS-201ENST00000356657 LINC00587B1AMM8 73 aa10.23□□□□□ -0.77
FDPS-201ENST00000356657 RPL18AQ02543 176 aaKnown RBP10.23□□□□□ -0.77
FDPS-201ENST00000356657 A0A096LNI7 61 aa10.22□□□□□ -0.77
FDPS-201ENST00000356657 J3QQQ9 107 aa10.22□□□□□ -0.77
FDPS-201ENST00000356657 SMIM6P0DI80 62 aa10.22□□□□□ -0.77
FDPS-201ENST00000356657 MYMXA0A1B0GTQ4 84 aa10.21□□□□□ -0.78
FDPS-201ENST00000356657 FAM30AQ9NZY2 134 aa10.21□□□□□ -0.78
FDPS-201ENST00000356657 NDUFA12Q9UI09 145 aa10.21□□□□□ -0.78
FDPS-201ENST00000356657 DNAH8Q96JB1 4490 aa10.2□□□□□ -0.78
FDPS-201ENST00000356657 IGKV2-24A0A0C4DH68 120 aa10.2□□□□□ -0.78
FDPS-201ENST00000356657 LGALS3P17931 250 aaKnown RBP10.2□□□□□ -0.78
FDPS-201ENST00000356657 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.2□□□□□ -0.78
FDPS-201ENST00000356657 RYR1P21817 5038 aa10.2□□□□□ -0.78
FDPS-201ENST00000356657 PYY3Q5JQD4 70 aa10.19□□□□□ -0.78
FDPS-201ENST00000356657 Q6ZRP5 223 aa10.19□□□□□ -0.78
FDPS-201ENST00000356657 LINC00518Q8N0U6 118 aa10.19□□□□□ -0.78
FDPS-201ENST00000356657 XGP55808 180 aa10.18□□□□□ -0.78
FDPS-201ENST00000356657 GAGE2BQ13066 116 aa10.18□□□□□ -0.78
FDPS-201ENST00000356657 MAJINQ3KP22 176 aa10.18□□□□□ -0.78
FDPS-201ENST00000356657 SCXQ7RTU7 201 aa10.18□□□□□ -0.78
FDPS-201ENST00000356657 ERG28Q9UKR5 140 aa10.18□□□□□ -0.78
FDPS-201ENST00000356657 APOBP04114 4563 aaKnown RBP10.18□□□□□ -0.78
FDPS-201ENST00000356657 JOSD1Q15040 202 aaPredicted RBP10.17□□□□□ -0.78
FDPS-201ENST00000356657 C9orf116Q5BN46 136 aaPredicted RBP10.17□□□□□ -0.78
FDPS-201ENST00000356657 DPH3Q96FX2 82 aa10.17□□□□□ -0.78
FDPS-201ENST00000356657 PLAC8Q9NZF1 115 aa10.17□□□□□ -0.78
FDPS-201ENST00000356657 HSBP1L1C9JCN9 74 aa10.17□□□□□ -0.78
FDPS-201ENST00000356657 CHTF8P0CG12 524 aa10.17□□□□□ -0.78
FDPS-201ENST00000356657 STPG4Q8N801 248 aa10.17□□□□□ -0.78
FDPS-201ENST00000356657 CIRBP-AS1Q8TBR5 109 aa10.17□□□□□ -0.78
FDPS-201ENST00000356657 TSPEAR-AS2P59090 65 aa10.16□□□□□ -0.78
FDPS-201ENST00000356657 C12orf57Q99622 126 aa10.16□□□□□ -0.78
FDPS-201ENST00000356657 A0A087WYN8 130 aa10.15□□□□□ -0.78
FDPS-201ENST00000356657 PANO1I0J062 215 aa10.15□□□□□ -0.78
FDPS-201ENST00000356657 SCGB1D1O95968 90 aa10.15□□□□□ -0.78
FDPS-201ENST00000356657 GAGE2EQ4V326 116 aa10.15□□□□□ -0.78
FDPS-201ENST00000356657 GAGE2DQ9UEU5 116 aa10.15□□□□□ -0.78
FDPS-201ENST00000356657 EPM2AB3EWF7 344 aa10.14□□□□□ -0.79
FDPS-201ENST00000356657 HSPG2P98160 4391 aa10.13□□□□□ -0.79
FDPS-201ENST00000356657 PFN2P35080 140 aa10.13□□□□□ -0.79
FDPS-201ENST00000356657 MEIG1Q5JSS6 88 aa10.13□□□□□ -0.79
FDPS-201ENST00000356657 ATOH7Q8N100 152 aa10.13□□□□□ -0.79
FDPS-201ENST00000356657 LINC00158P58513 81 aa10.1□□□□□ -0.79
FDPS-201ENST00000356657 C9orf129Q5T035 196 aaKnown RBP10.1□□□□□ -0.79
FDPS-201ENST00000356657 PLA2G2DQ9UNK4 145 aa10.1□□□□□ -0.79
FDPS-201ENST00000356657 IGKV2D-26A0A0A0MRZ7 120 aa10.1□□□□□ -0.79
FDPS-201ENST00000356657 ZNF815PA8K554 130 aa10.1□□□□□ -0.79
FDPS-201ENST00000356657 HAMPP81172 84 aa10.1□□□□□ -0.79
FDPS-201ENST00000356657 ANKRD39Q53RE8 183 aa10.1□□□□□ -0.79
FDPS-201ENST00000356657 TIMM17BO60830 172 aa10.09□□□□□ -0.79
FDPS-201ENST00000356657 Q8N1X5 172 aa10.09□□□□□ -0.79
FDPS-201ENST00000356657 C7orf33Q8WU49 177 aa10.09□□□□□ -0.79
FDPS-201ENST00000356657 SND1-IT1Q9HBX3 110 aa10.09□□□□□ -0.79
FDPS-201ENST00000356657 XAGE1AQ9HD64 81 aa10.09□□□□□ -0.79
FDPS-201ENST00000356657 A0A0J9YXY3 114 aa10.08□□□□□ -0.8
FDPS-201ENST00000356657 SMIM13P0DJ93 91 aa10.08□□□□□ -0.8
FDPS-201ENST00000356657 TP73-AS1Q9UF72 201 aa10.07□□□□□ -0.8
FDPS-201ENST00000356657 PCLOQ9Y6V0 5065 aa10.07□□□□□ -0.8
FDPS-201ENST00000356657 A0A1W2PNN7 141 aa10.06□□□□□ -0.8
FDPS-201ENST00000356657 FAM229AH3BQW9 127 aa10.06□□□□□ -0.8
FDPS-201ENST00000356657 MIR7-3HGQ8N6C7 128 aa10.06□□□□□ -0.8
FDPS-201ENST00000356657 RPL24P83731 157 aaKnown RBP10.05□□□□□ -0.8
FDPS-201ENST00000356657 LINC00528Q8N1L1 170 aa10.05□□□□□ -0.8
FDPS-201ENST00000356657 IGLV5-37A0A075B6J1 123 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms