RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 TRAV12-1A0A0B4J245 112 aa10.04□□□□□ -0.8
MRPL55-202ENST00000336300 LEPROTL1O95214 131 aa10.04□□□□□ -0.8
MRPL55-202ENST00000336300 CXCL5P42830 114 aa10.04□□□□□ -0.8
MRPL55-202ENST00000336300 C10orf25Q5T742 122 aa10.04□□□□□ -0.8
MRPL55-202ENST00000336300 PLAC8Q9NZF1 115 aa10.04□□□□□ -0.8
MRPL55-202ENST00000336300 HSPB8Q9UJY1 196 aa10.04□□□□□ -0.8
MRPL55-202ENST00000336300 CHTOPQ9Y3Y2 248 aaKnown RBP10.04□□□□□ -0.8
MRPL55-202ENST00000336300 SMIM1B2RUZ4 78 aa10.03□□□□□ -0.8
MRPL55-202ENST00000336300 C2orf82Q6UX34 121 aa10.03□□□□□ -0.8
MRPL55-202ENST00000336300 COX7B2Q8TF08 81 aa10.03□□□□□ -0.8
MRPL55-202ENST00000336300 C6orf48Q9UBA6 75 aa10.03□□□□□ -0.8
MRPL55-202ENST00000336300 SPINK8P0C7L1 97 aa10.02□□□□□ -0.81
MRPL55-202ENST00000336300 TLX1NBP0CAT3 122 aa10.02□□□□□ -0.81
MRPL55-202ENST00000336300 C7orf33Q8WU49 177 aa10.02□□□□□ -0.81
MRPL55-202ENST00000336300 F8VRH5 84 aa10.01□□□□□ -0.81
MRPL55-202ENST00000336300 TMEM170BQ5T4T1 132 aa10.01□□□□□ -0.81
MRPL55-202ENST00000336300 HIST1H2BKO60814 126 aa10□□□□□ -0.81
MRPL55-202ENST00000336300 HIST1H2BJP06899 126 aa10□□□□□ -0.81
MRPL55-202ENST00000336300 INAFM2P0DMQ5 153 aa10□□□□□ -0.81
MRPL55-202ENST00000336300 ZNF22P17026 224 aaPredicted RBP10□□□□□ -0.81
MRPL55-202ENST00000336300 HIST1H2BOP23527 126 aa10□□□□□ -0.81
MRPL55-202ENST00000336300 HIST1H2BBP33778 126 aa10□□□□□ -0.81
MRPL55-202ENST00000336300 HIST1H2BDP58876 126 aa10□□□□□ -0.81
MRPL55-202ENST00000336300 HIST1H2BCP62807 126 aa10□□□□□ -0.81
MRPL55-202ENST00000336300 HIST2H2BEQ16778 126 aa10□□□□□ -0.81
MRPL55-202ENST00000336300 HIST2H2BFQ5QNW6 126 aaPredicted RBP10□□□□□ -0.81
MRPL55-202ENST00000336300 HIST1H2BHQ93079 126 aa10□□□□□ -0.81
MRPL55-202ENST00000336300 HIST1H2BNQ99877 126 aa10□□□□□ -0.81
MRPL55-202ENST00000336300 HIST1H2BMQ99879 126 aa10□□□□□ -0.81
MRPL55-202ENST00000336300 NDUFC2-KCTD14E9PQ53 114 aa9.99□□□□□ -0.81
MRPL55-202ENST00000336300 LINC00310P59036 64 aa9.99□□□□□ -0.81
MRPL55-202ENST00000336300 RPL37AP61513 92 aaKnown RBP9.99□□□□□ -0.81
MRPL55-202ENST00000336300 GAGE2EQ4V326 116 aa9.99□□□□□ -0.81
MRPL55-202ENST00000336300 GAGE2DQ9UEU5 116 aa9.99□□□□□ -0.81
MRPL55-202ENST00000336300 C11orf86A6NJI1 115 aa9.98□□□□□ -0.81
MRPL55-202ENST00000336300 H0Y8G0 127 aa9.98□□□□□ -0.81
MRPL55-202ENST00000336300 NUPR1O60356 82 aa9.98□□□□□ -0.81
MRPL55-202ENST00000336300 ATP6V1G1O75348 118 aa9.98□□□□□ -0.81
MRPL55-202ENST00000336300 FABP4P15090 132 aa9.98□□□□□ -0.81
MRPL55-202ENST00000336300 Q6ZRP5 223 aa9.98□□□□□ -0.81
MRPL55-202ENST00000336300 ABCA13Q86UQ4 5058 aa9.97□□□□□ -0.81
MRPL55-202ENST00000336300 C9orf116Q5BN46 136 aaPredicted RBP9.97□□□□□ -0.81
MRPL55-202ENST00000336300 SRRM2Q9UQ35 2752 aaKnown RBP9.97□□□□□ -0.81
MRPL55-202ENST00000336300 IGLV5-39A0A0G2JS06 123 aa9.96□□□□□ -0.82
MRPL55-202ENST00000336300 MAP1LC3CQ9BXW4 147 aa9.96□□□□□ -0.82
MRPL55-202ENST00000336300 VPS13BQ7Z7G8 4022 aa9.96□□□□□ -0.82
MRPL55-202ENST00000336300 PCLOQ9Y6V0 5065 aa9.96□□□□□ -0.82
MRPL55-202ENST00000336300 SFTA2Q6UW10 78 aa9.95□□□□□ -0.82
MRPL55-202ENST00000336300 ODF1Q14990 250 aa9.94□□□□□ -0.82
MRPL55-202ENST00000336300 A0A1W2PNN7 141 aa9.93□□□□□ -0.82
MRPL55-202ENST00000336300 PLNP26678 52 aa9.93□□□□□ -0.82
MRPL55-202ENST00000336300 TMEM223A0PJW6 202 aa9.92□□□□□ -0.82
MRPL55-202ENST00000336300 DPM2O94777 84 aa9.9□□□□□ -0.82
MRPL55-202ENST00000336300 COA6Q5JTJ3 125 aaKnown RBP9.89□□□□□ -0.83
MRPL55-202ENST00000336300 FAM19A5Q7Z5A7 132 aaPredicted RBP9.89□□□□□ -0.83
MRPL55-202ENST00000336300 FAM168BA1KXE4 195 aa9.88□□□□□ -0.83
MRPL55-202ENST00000336300 IGKCP01834 107 aa9.88□□□□□ -0.83
MRPL55-202ENST00000336300 KRTAP10-4P60372 401 aaPredicted RBP9.88□□□□□ -0.83
MRPL55-202ENST00000336300 HERVK_113P61574 105 aa9.88□□□□□ -0.83
MRPL55-202ENST00000336300 COX17Q14061 63 aa9.88□□□□□ -0.83
MRPL55-202ENST00000336300 C9orf129Q5T035 196 aaKnown RBP9.88□□□□□ -0.83
MRPL55-202ENST00000336300 XAGE1AQ9HD64 81 aa9.88□□□□□ -0.83
MRPL55-202ENST00000336300 PFN2P35080 140 aa9.87□□□□□ -0.83
MRPL55-202ENST00000336300 SYS1-DBNDD2H3BUS1 97 aa9.86□□□□□ -0.83
MRPL55-202ENST00000336300 PHF5AQ7RTV0 110 aaKnown RBP9.86□□□□□ -0.83
MRPL55-202ENST00000336300 ERG28Q9UKR5 140 aa9.86□□□□□ -0.83
MRPL55-202ENST00000336300 M0QXV9 152 aa9.85□□□□□ -0.83
MRPL55-202ENST00000336300 PRR3P79522 188 aaKnown RBP9.85□□□□□ -0.83
MRPL55-202ENST00000336300 ZNF625Q96I27 306 aaPredicted RBP9.85□□□□□ -0.83
MRPL55-202ENST00000336300 PMCHL2Q9BQD1 86 aa9.85□□□□□ -0.83
MRPL55-202ENST00000336300 LINC00587B1AMM8 73 aa9.84□□□□□ -0.83
MRPL55-202ENST00000336300 HERV-K104P63124 156 aa9.84□□□□□ -0.83
MRPL55-202ENST00000336300 UBE2BP63146 152 aa9.84□□□□□ -0.83
MRPL55-202ENST00000336300 LBHQ53QV2 105 aaPredicted RBP9.84□□□□□ -0.83
MRPL55-202ENST00000336300 PET117Q6UWS5 81 aa9.84□□□□□ -0.83
MRPL55-202ENST00000336300 PLEKHB2Q96CS7 222 aa9.84□□□□□ -0.83
MRPL55-202ENST00000336300 MYMXA0A1B0GTQ4 84 aa9.83□□□□□ -0.84
MRPL55-202ENST00000336300 LEPROTO15243 131 aa9.83□□□□□ -0.84
MRPL55-202ENST00000336300 LINC00158P58513 81 aa9.82□□□□□ -0.84
MRPL55-202ENST00000336300 NDUFA12Q9UI09 145 aa9.82□□□□□ -0.84
MRPL55-202ENST00000336300 C22orf24Q9Y442 160 aa9.82□□□□□ -0.84
MRPL55-202ENST00000336300 S100A6P06703 90 aa9.81□□□□□ -0.84
MRPL55-202ENST00000336300 MEIG1Q5JSS6 88 aa9.81□□□□□ -0.84
MRPL55-202ENST00000336300 PSORS1C2Q9UIG4 136 aa9.81□□□□□ -0.84
MRPL55-202ENST00000336300 PLA2G2DQ9UNK4 145 aa9.81□□□□□ -0.84
MRPL55-202ENST00000336300 C20orf202A1L168 122 aa9.8□□□□□ -0.84
MRPL55-202ENST00000336300 J3QQQ9 107 aa9.8□□□□□ -0.84
MRPL55-202ENST00000336300 LGALS3P17931 250 aaKnown RBP9.8□□□□□ -0.84
MRPL55-202ENST00000336300 KRTDAPP60985 99 aa9.8□□□□□ -0.84
MRPL55-202ENST00000336300 C1orf137Q5JT78 98 aa9.8□□□□□ -0.84
MRPL55-202ENST00000336300 SERTAD4-AS1Q5TG53 156 aa9.8□□□□□ -0.84
MRPL55-202ENST00000336300 LINC01545Q5VT33 79 aa9.8□□□□□ -0.84
MRPL55-202ENST00000336300 TP73-AS1Q9UF72 201 aa9.8□□□□□ -0.84
MRPL55-202ENST00000336300 C3orf79P0CE67 100 aa9.79□□□□□ -0.84
MRPL55-202ENST00000336300 S100A2P29034 98 aa9.79□□□□□ -0.84
MRPL55-202ENST00000336300 NMUP48645 174 aa9.79□□□□□ -0.84
MRPL55-202ENST00000336300 RPL24P83731 157 aaKnown RBP9.79□□□□□ -0.84
MRPL55-202ENST00000336300 KRTAP7-1Q8IUC3 87 aa9.79□□□□□ -0.84
MRPL55-202ENST00000336300 NKAPP1Q8N9T2 125 aa9.79□□□□□ -0.84
MRPL55-202ENST00000336300 SND1-IT1Q9HBX3 110 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms