RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 PRSS2P07478 247 aa10.48□□□□□ -0.73
LRRC42-201ENST00000319223 C6orf226Q5I0X4 101 aa10.48□□□□□ -0.73
LRRC42-201ENST00000319223 Q8IZM0 81 aa10.48□□□□□ -0.73
LRRC42-201ENST00000319223 SRRM2Q9UQ35 2752 aaKnown RBP10.48□□□□□ -0.73
LRRC42-201ENST00000319223 HIST1H2BKO60814 126 aa10.47□□□□□ -0.73
LRRC42-201ENST00000319223 HIST1H2BJP06899 126 aa10.47□□□□□ -0.73
LRRC42-201ENST00000319223 ZNF22P17026 224 aaPredicted RBP10.47□□□□□ -0.73
LRRC42-201ENST00000319223 HIST1H2BOP23527 126 aa10.47□□□□□ -0.73
LRRC42-201ENST00000319223 HIST1H2BBP33778 126 aa10.47□□□□□ -0.73
LRRC42-201ENST00000319223 HIST1H2BDP58876 126 aa10.47□□□□□ -0.73
LRRC42-201ENST00000319223 HIST1H2BCP62807 126 aa10.47□□□□□ -0.73
LRRC42-201ENST00000319223 HIST2H2BEQ16778 126 aa10.47□□□□□ -0.73
LRRC42-201ENST00000319223 C9orf116Q5BN46 136 aaPredicted RBP10.47□□□□□ -0.73
LRRC42-201ENST00000319223 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.47□□□□□ -0.73
LRRC42-201ENST00000319223 HIST1H2BHQ93079 126 aa10.47□□□□□ -0.73
LRRC42-201ENST00000319223 HIST1H2BNQ99877 126 aa10.47□□□□□ -0.73
LRRC42-201ENST00000319223 HIST1H2BMQ99879 126 aa10.47□□□□□ -0.73
LRRC42-201ENST00000319223 C11orf86A6NJI1 115 aa10.47□□□□□ -0.73
LRRC42-201ENST00000319223 ATP6V1G1O75348 118 aa10.47□□□□□ -0.73
LRRC42-201ENST00000319223 KRTAP10-4P60372 401 aaPredicted RBP10.47□□□□□ -0.73
LRRC42-201ENST00000319223 RPL18AQ02543 176 aaKnown RBP10.47□□□□□ -0.73
LRRC42-201ENST00000319223 Q6ZRP5 223 aa10.46□□□□□ -0.74
LRRC42-201ENST00000319223 CHTOPQ9Y3Y2 248 aaKnown RBP10.46□□□□□ -0.74
LRRC42-201ENST00000319223 CKS1BP61024 79 aa10.45□□□□□ -0.74
LRRC42-201ENST00000319223 LINC00474Q9P2X8 69 aa10.45□□□□□ -0.74
LRRC42-201ENST00000319223 PKIGQ9Y2B9 76 aa10.45□□□□□ -0.74
LRRC42-201ENST00000319223 A0A1W2PNN7 141 aa10.44□□□□□ -0.74
LRRC42-201ENST00000319223 TLX1NBP0CAT3 122 aa10.44□□□□□ -0.74
LRRC42-201ENST00000319223 COX7B2Q8TF08 81 aa10.44□□□□□ -0.74
LRRC42-201ENST00000319223 TRAV12-1A0A0B4J245 112 aa10.44□□□□□ -0.74
LRRC42-201ENST00000319223 TRBV30A0A0K0K1B3 111 aa10.44□□□□□ -0.74
LRRC42-201ENST00000319223 PLA2G1BP04054 148 aaKnown RBP10.44□□□□□ -0.74
LRRC42-201ENST00000319223 FABP4P15090 132 aa10.44□□□□□ -0.74
LRRC42-201ENST00000319223 S100A1P23297 94 aa10.44□□□□□ -0.74
LRRC42-201ENST00000319223 H3BRM9 83 aa10.43□□□□□ -0.74
LRRC42-201ENST00000319223 LEPROTL1O95214 131 aa10.43□□□□□ -0.74
LRRC42-201ENST00000319223 INAFM2P0DMQ5 153 aa10.43□□□□□ -0.74
LRRC42-201ENST00000319223 IGLV5-39A0A0G2JS06 123 aa10.41□□□□□ -0.74
LRRC42-201ENST00000319223 H0Y8G0 127 aa10.41□□□□□ -0.74
LRRC42-201ENST00000319223 GAGE2EQ4V326 116 aa10.41□□□□□ -0.74
LRRC42-201ENST00000319223 TMEM170BQ5T4T1 132 aa10.41□□□□□ -0.74
LRRC42-201ENST00000319223 GAGE2DQ9UEU5 116 aa10.41□□□□□ -0.74
LRRC42-201ENST00000319223 F8VRH5 84 aa10.41□□□□□ -0.74
LRRC42-201ENST00000319223 RPL37AP61513 92 aaKnown RBP10.41□□□□□ -0.74
LRRC42-201ENST00000319223 FAM168BA1KXE4 195 aa10.39□□□□□ -0.75
LRRC42-201ENST00000319223 NDUFC2-KCTD14E9PQ53 114 aa10.39□□□□□ -0.75
LRRC42-201ENST00000319223 CXCL5P42830 114 aa10.39□□□□□ -0.75
LRRC42-201ENST00000319223 ODF1Q14990 250 aa10.39□□□□□ -0.75
LRRC42-201ENST00000319223 C9orf129Q5T035 196 aaKnown RBP10.38□□□□□ -0.75
LRRC42-201ENST00000319223 KRTAP7-1Q8IUC3 87 aa10.38□□□□□ -0.75
LRRC42-201ENST00000319223 HSPB8Q9UJY1 196 aa10.38□□□□□ -0.75
LRRC42-201ENST00000319223 TMEM223A0PJW6 202 aa10.37□□□□□ -0.75
LRRC42-201ENST00000319223 HNRNPA3P51991 378 aaKnown RBP10.37□□□□□ -0.75
LRRC42-201ENST00000319223 C7orf33Q8WU49 177 aa10.36□□□□□ -0.75
LRRC42-201ENST00000319223 PMCHL2Q9BQD1 86 aa10.36□□□□□ -0.75
LRRC42-201ENST00000319223 PHF5AQ7RTV0 110 aaKnown RBP10.35□□□□□ -0.75
LRRC42-201ENST00000319223 FLG2Q5D862 2391 aaPredicted RBP10.34□□□□□ -0.75
LRRC42-201ENST00000319223 COA6Q5JTJ3 125 aaKnown RBP10.34□□□□□ -0.75
LRRC42-201ENST00000319223 XAGE1AQ9HD64 81 aa10.34□□□□□ -0.75
LRRC42-201ENST00000319223 FAM19A5Q7Z5A7 132 aaPredicted RBP10.33□□□□□ -0.76
LRRC42-201ENST00000319223 ZNF625Q96I27 306 aaPredicted RBP10.33□□□□□ -0.76
LRRC42-201ENST00000319223 MAP1LC3CQ9BXW4 147 aa10.32□□□□□ -0.76
LRRC42-201ENST00000319223 PRR3P79522 188 aaKnown RBP10.3□□□□□ -0.76
LRRC42-201ENST00000319223 SERTAD4-AS1Q5TG53 156 aa10.3□□□□□ -0.76
LRRC42-201ENST00000319223 KRTAP11-1Q8IUC1 163 aa10.3□□□□□ -0.76
LRRC42-201ENST00000319223 PFN2P35080 140 aa10.3□□□□□ -0.76
LRRC42-201ENST00000319223 SYS1-DBNDD2H3BUS1 97 aa10.29□□□□□ -0.76
LRRC42-201ENST00000319223 DPM2O94777 84 aa10.29□□□□□ -0.76
LRRC42-201ENST00000319223 PLNP26678 52 aa10.29□□□□□ -0.76
LRRC42-201ENST00000319223 MYCBP2O75592 4640 aa10.28□□□□□ -0.76
LRRC42-201ENST00000319223 IGKCP01834 107 aa10.28□□□□□ -0.76
LRRC42-201ENST00000319223 ERG28Q9UKR5 140 aa10.28□□□□□ -0.76
LRRC42-201ENST00000319223 PKHD1L1Q86WI1 4243 aa10.27□□□□□ -0.77
LRRC42-201ENST00000319223 M0QXV9 152 aa10.27□□□□□ -0.77
LRRC42-201ENST00000319223 TSPEAR-AS2P59090 65 aa10.27□□□□□ -0.77
LRRC42-201ENST00000319223 PSORS1C2Q9UIG4 136 aa10.26□□□□□ -0.77
LRRC42-201ENST00000319223 C3orf79P0CE67 100 aa10.25□□□□□ -0.77
LRRC42-201ENST00000319223 C22orf24Q9Y442 160 aa10.24□□□□□ -0.77
LRRC42-201ENST00000319223 LEPROTO15243 131 aa10.24□□□□□ -0.77
LRRC42-201ENST00000319223 LINC01545Q5VT33 79 aa10.24□□□□□ -0.77
LRRC42-201ENST00000319223 A0A0U1RRA0 63 aa10.23□□□□□ -0.77
LRRC42-201ENST00000319223 SFTA2Q6UW10 78 aa10.23□□□□□ -0.77
LRRC42-201ENST00000319223 SND1-IT1Q9HBX3 110 aa10.23□□□□□ -0.77
LRRC42-201ENST00000319223 COX17Q14061 63 aa10.22□□□□□ -0.77
LRRC42-201ENST00000319223 PET117Q6UWS5 81 aa10.22□□□□□ -0.77
LRRC42-201ENST00000319223 NDUFA12Q9UI09 145 aa10.22□□□□□ -0.77
LRRC42-201ENST00000319223 KRTDAPP60985 99 aa10.21□□□□□ -0.77
LRRC42-201ENST00000319223 LINC00158P58513 81 aa10.21□□□□□ -0.78
LRRC42-201ENST00000319223 C1orf137Q5JT78 98 aa10.21□□□□□ -0.78
LRRC42-201ENST00000319223 PLEKHB2Q96CS7 222 aa10.21□□□□□ -0.78
LRRC42-201ENST00000319223 PLA2G2DQ9UNK4 145 aa10.21□□□□□ -0.78
LRRC42-201ENST00000319223 J3QQQ9 107 aa10.2□□□□□ -0.78
LRRC42-201ENST00000319223 SMIM13P0DJ93 91 aa10.2□□□□□ -0.78
LRRC42-201ENST00000319223 HERVK_113P61574 105 aa10.2□□□□□ -0.78
LRRC42-201ENST00000319223 UBE2BP63146 152 aa10.2□□□□□ -0.78
LRRC42-201ENST00000319223 SRSF9Q13242 221 aaKnown RBP eCLIP10.2□□□□□ -0.78
LRRC42-201ENST00000319223 Q8NDZ9 215 aa10.2□□□□□ -0.78
LRRC42-201ENST00000319223 LRP1Q07954 4544 aaKnown RBP10.19□□□□□ -0.78
LRRC42-201ENST00000319223 MYMXA0A1B0GTQ4 84 aa10.19□□□□□ -0.78
LRRC42-201ENST00000319223 HERV-K104P63124 156 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms