RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 TRAV10A0A0B4J240 114 aa6.78□□□□□ -1.32
RBFOX1-201ENST00000311745 A8MU10 97 aa6.78□□□□□ -1.32
RBFOX1-201ENST00000311745 RPL11P62913 178 aaKnown RBP6.78□□□□□ -1.32
RBFOX1-201ENST00000311745 TMEM141Q96I45 108 aa6.78□□□□□ -1.32
RBFOX1-201ENST00000311745 IGHV1-58A0A0C4DH39 117 aa6.78□□□□□ -1.32
RBFOX1-201ENST00000311745 SLPIP03973 132 aa6.78□□□□□ -1.32
RBFOX1-201ENST00000311745 KLKP1Q107X0 134 aa6.78□□□□□ -1.32
RBFOX1-201ENST00000311745 CMYA5Q8N3K9 4069 aa6.77□□□□□ -1.33
RBFOX1-201ENST00000311745 MIFP14174 115 aa6.77□□□□□ -1.33
RBFOX1-201ENST00000311745 HAMPP81172 84 aa6.77□□□□□ -1.33
RBFOX1-201ENST00000311745 SETXQ7Z333 2677 aaKnown RBP6.77□□□□□ -1.33
RBFOX1-201ENST00000311745 FAM208BQ5VWN6 2430 aa6.77□□□□□ -1.33
RBFOX1-201ENST00000311745 TMEM256-PLSCR3K7ERE1 68 aa6.76□□□□□ -1.33
RBFOX1-201ENST00000311745 POLR2KP53803 58 aaKnown RBP6.76□□□□□ -1.33
RBFOX1-201ENST00000311745 FAM104AQ969W3 186 aa6.76□□□□□ -1.33
RBFOX1-201ENST00000311745 ITPR2Q14571 2701 aa6.76□□□□□ -1.33
RBFOX1-201ENST00000311745 PRM2P04554 102 aa6.76□□□□□ -1.33
RBFOX1-201ENST00000311745 SUMO4Q6EEV6 95 aa6.76□□□□□ -1.33
RBFOX1-201ENST00000311745 FAM74A4Q5TZK3 123 aa6.75□□□□□ -1.33
RBFOX1-201ENST00000311745 FLNAP21333 2647 aaKnown RBP6.75□□□□□ -1.33
RBFOX1-201ENST00000311745 KTN1-AS1Q86SY8 53 aa6.75□□□□□ -1.33
RBFOX1-201ENST00000311745 C4orf3Q8WVX3 66 aa6.75□□□□□ -1.33
RBFOX1-201ENST00000311745 A0A087WWL8 130 aa6.75□□□□□ -1.33
RBFOX1-201ENST00000311745 BEAN1Q3B7T3 259 aa6.75□□□□□ -1.33
RBFOX1-201ENST00000311745 UBL5Q9BZL1 73 aa6.75□□□□□ -1.33
RBFOX1-201ENST00000311745 SPINK13Q1W4C9 94 aa6.74□□□□□ -1.33
RBFOX1-201ENST00000311745 OTOGQ6ZRI0 2925 aa6.74□□□□□ -1.33
RBFOX1-201ENST00000311745 DNAJC9-AS1A6NH13 148 aa6.74□□□□□ -1.33
RBFOX1-201ENST00000311745 VCYO14598 125 aa6.74□□□□□ -1.33
RBFOX1-201ENST00000311745 FUSP35637 526 aaKnown RBP eCLIP6.74□□□□□ -1.33
RBFOX1-201ENST00000311745 A0A087WYN8 130 aa6.73□□□□□ -1.33
RBFOX1-201ENST00000311745 C8orf87E5RJ46 101 aa6.73□□□□□ -1.33
RBFOX1-201ENST00000311745 M0QY20 66 aa6.73□□□□□ -1.33
RBFOX1-201ENST00000311745 IGKV3-20P01619 116 aa6.73□□□□□ -1.33
RBFOX1-201ENST00000311745 ATP5EP56381 51 aaPredicted RBP6.73□□□□□ -1.33
RBFOX1-201ENST00000311745 TM2D3Q9BRN9 247 aa6.73□□□□□ -1.33
RBFOX1-201ENST00000311745 NAV2Q8IVL1 2488 aa6.73□□□□□ -1.33
RBFOX1-201ENST00000311745 LECT2O14960 151 aa6.73□□□□□ -1.33
RBFOX1-201ENST00000311745 MIR7-3HGQ8N6C7 128 aa6.73□□□□□ -1.33
RBFOX1-201ENST00000311745 M0R378 163 aa6.72□□□□□ -1.33
RBFOX1-201ENST00000311745 NDUFC1O43677 76 aa6.72□□□□□ -1.33
RBFOX1-201ENST00000311745 TRBV6-5A0A0K0K1A5 114 aa6.72□□□□□ -1.33
RBFOX1-201ENST00000311745 C11orf44Q8N8P7 122 aa6.72□□□□□ -1.33
RBFOX1-201ENST00000311745 LINC00308Q8TCZ7 52 aa6.72□□□□□ -1.33
RBFOX1-201ENST00000311745 CD28P10747 220 aa6.72□□□□□ -1.33
RBFOX1-201ENST00000311745 PLA2G2AP14555 144 aa6.72□□□□□ -1.33
RBFOX1-201ENST00000311745 C11orf72Q8NBR9 251 aa6.71□□□□□ -1.33
RBFOX1-201ENST00000311745 DEFB114Q30KQ6 69 aa6.71□□□□□ -1.34
RBFOX1-201ENST00000311745 MAP6D1Q9H9H5 199 aa6.71□□□□□ -1.34
RBFOX1-201ENST00000311745 CCL24O00175 119 aa6.7□□□□□ -1.34
RBFOX1-201ENST00000311745 PPP1R17O96001 155 aa6.7□□□□□ -1.34
RBFOX1-201ENST00000311745 Q6ZSN1 163 aa6.7□□□□□ -1.34
RBFOX1-201ENST00000311745 MDFIQ99750 246 aa6.7□□□□□ -1.34
RBFOX1-201ENST00000311745 PROK1P58294 105 aa6.7□□□□□ -1.34
RBFOX1-201ENST00000311745 NANOS2P60321 138 aaKnown RBP6.7□□□□□ -1.34
RBFOX1-201ENST00000311745 Q6ZTI0 123 aa6.7□□□□□ -1.34
RBFOX1-201ENST00000311745 SCXQ7RTU7 201 aa6.7□□□□□ -1.34
RBFOX1-201ENST00000311745 ZNF73O43830 326 aaPredicted RBP6.69□□□□□ -1.34
RBFOX1-201ENST00000311745 RPL36AP83881 106 aaKnown RBP6.69□□□□□ -1.34
RBFOX1-201ENST00000311745 RPL36ALQ969Q0 106 aaKnown RBP6.69□□□□□ -1.34
RBFOX1-201ENST00000311745 DEFB131AP59861 70 aa6.69□□□□□ -1.34
RBFOX1-201ENST00000311745 ODF3L2Q3SX64 289 aa6.69□□□□□ -1.34
RBFOX1-201ENST00000311745 ATP5EP2Q5VTU8 51 aa6.69□□□□□ -1.34
RBFOX1-201ENST00000311745 TMEM254Q8TBM7 123 aa6.69□□□□□ -1.34
RBFOX1-201ENST00000311745 Q9H8V8 135 aa6.69□□□□□ -1.34
RBFOX1-201ENST00000311745 LINC00467Q9BRT7 94 aa6.68□□□□□ -1.34
RBFOX1-201ENST00000311745 GCN1Q92616 2671 aaKnown RBP6.68□□□□□ -1.34
RBFOX1-201ENST00000311745 ANK2Q01484 3957 aa6.68□□□□□ -1.34
RBFOX1-201ENST00000311745 IBA57-AS1B1ANH7 110 aa6.68□□□□□ -1.34
RBFOX1-201ENST00000311745 DYNLRB2Q8TF09 96 aa6.68□□□□□ -1.34
RBFOX1-201ENST00000311745 A8MUN3 132 aa6.68□□□□□ -1.34
RBFOX1-201ENST00000311745 CRPP02741 224 aa6.68□□□□□ -1.34
RBFOX1-201ENST00000311745 GIG44P09565 113 aaPredicted RBP6.68□□□□□ -1.34
RBFOX1-201ENST00000311745 VWFP04275 2813 aa6.67□□□□□ -1.34
RBFOX1-201ENST00000311745 Q6ZRP5 223 aa6.67□□□□□ -1.34
RBFOX1-201ENST00000311745 IGLV4-3A0A075B6K6 122 aa6.67□□□□□ -1.34
RBFOX1-201ENST00000311745 KRTAP10-3P60369 221 aa6.67□□□□□ -1.34
RBFOX1-201ENST00000311745 Q8N3U1 123 aa6.67□□□□□ -1.34
RBFOX1-201ENST00000311745 PRR26Q8N8Z3 221 aa6.67□□□□□ -1.34
RBFOX1-201ENST00000311745 UNC79Q9P2D8 2635 aa6.67□□□□□ -1.34
RBFOX1-201ENST00000311745 UBE2L6O14933 153 aa6.67□□□□□ -1.34
RBFOX1-201ENST00000311745 PRR4Q16378 134 aa6.67□□□□□ -1.34
RBFOX1-201ENST00000311745 LINC00588Q9Y4M8 146 aa6.66□□□□□ -1.34
RBFOX1-201ENST00000311745 CREBBPQ92793 2442 aa6.66□□□□□ -1.34
RBFOX1-201ENST00000311745 C19orf73Q9NVV2 129 aa6.66□□□□□ -1.34
RBFOX1-201ENST00000311745 TRRAPQ9Y4A5 3859 aa6.66□□□□□ -1.34
RBFOX1-201ENST00000311745 DNAH3Q8TD57 4116 aa6.65□□□□□ -1.34
RBFOX1-201ENST00000311745 UBE2BP63146 152 aa6.65□□□□□ -1.34
RBFOX1-201ENST00000311745 LINC01006Q8NI28 216 aa6.65□□□□□ -1.34
RBFOX1-201ENST00000311745 ORMDL1Q9P0S3 153 aa6.65□□□□□ -1.34
RBFOX1-201ENST00000311745 HELZ2Q9BYK8 2649 aaKnown RBP6.65□□□□□ -1.34
RBFOX1-201ENST00000311745 TRAV22A0A0B4J277 110 aa6.65□□□□□ -1.34
RBFOX1-201ENST00000311745 NREPQ16612 68 aa6.65□□□□□ -1.34
RBFOX1-201ENST00000311745 TLN2Q9Y4G6 2542 aa6.65□□□□□ -1.35
RBFOX1-201ENST00000311745 CHKB-CPT1BH3BT56 60 aa6.65□□□□□ -1.35
RBFOX1-201ENST00000311745 PRYO14603 147 aa6.64□□□□□ -1.35
RBFOX1-201ENST00000311745 SONP18583 2426 aaKnown RBP6.63□□□□□ -1.35
RBFOX1-201ENST00000311745 SMR3AQ99954 134 aa6.63□□□□□ -1.35
RBFOX1-201ENST00000311745 SYCNQ0VAF6 134 aa6.63□□□□□ -1.35
RBFOX1-201ENST00000311745 Q6ZVQ6 151 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms