RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 A6NDX4 124 aa12.81□□□□□ -0.36
SPSB4-201ENST00000310546 DEFB131AP59861 70 aa12.81□□□□□ -0.36
SPSB4-201ENST00000310546 MRAPQ8TCY5 172 aa12.8□□□□□ -0.36
SPSB4-201ENST00000310546 IGKV3OR2-268A0A0C4DH90 116 aa12.8□□□□□ -0.36
SPSB4-201ENST00000310546 NDUFC2O95298 119 aa12.8□□□□□ -0.36
SPSB4-201ENST00000310546 PAX4O43316 350 aa12.78□□□□□ -0.36
SPSB4-201ENST00000310546 SMR3AQ99954 134 aa12.78□□□□□ -0.36
SPSB4-201ENST00000310546 FAM236DA0A1B0GTK5 79 aa12.78□□□□□ -0.36
SPSB4-201ENST00000310546 CCKP06307 115 aa12.78□□□□□ -0.36
SPSB4-201ENST00000310546 FAM236CP0DP71 79 aa12.78□□□□□ -0.36
SPSB4-201ENST00000310546 CCL18P55774 89 aa12.78□□□□□ -0.36
SPSB4-201ENST00000310546 ORMDL1Q9P0S3 153 aa12.78□□□□□ -0.36
SPSB4-201ENST00000310546 LINC00336Q6ZUF6 198 aa12.77□□□□□ -0.36
SPSB4-201ENST00000310546 KRTAP1-3Q8IUG1 177 aa12.77□□□□□ -0.36
SPSB4-201ENST00000310546 CDC42SE2Q9NRR3 84 aa12.77□□□□□ -0.37
SPSB4-201ENST00000310546 SS18Q15532 418 aa12.76□□□□□ -0.37
SPSB4-201ENST00000310546 HIVEP1P15822 2718 aa12.76□□□□□ -0.37
SPSB4-201ENST00000310546 COX7B2Q8TF08 81 aa12.76□□□□□ -0.37
SPSB4-201ENST00000310546 XCL1P47992 114 aa12.75□□□□□ -0.37
SPSB4-201ENST00000310546 KHDC1LQ5JSQ8 128 aa12.75□□□□□ -0.37
SPSB4-201ENST00000310546 NTM-AS1Q6ZSK4 140 aa12.75□□□□□ -0.37
SPSB4-201ENST00000310546 XCL2Q9UBD3 114 aa12.75□□□□□ -0.37
SPSB4-201ENST00000310546 PSMB8P28062 276 aa12.75□□□□□ -0.37
SPSB4-201ENST00000310546 RNASE1P07998 156 aaKnown RBP12.75□□□□□ -0.37
SPSB4-201ENST00000310546 NDUFC2-KCTD14E9PQ53 114 aa12.74□□□□□ -0.37
SPSB4-201ENST00000310546 S100A7L2Q5SY68 101 aa12.74□□□□□ -0.37
SPSB4-201ENST00000310546 FAM19A3Q7Z5A8 133 aa12.74□□□□□ -0.37
SPSB4-201ENST00000310546 C11orf72Q8NBR9 251 aa12.74□□□□□ -0.37
SPSB4-201ENST00000310546 C1orf43Q9BWL3 253 aa12.73□□□□□ -0.37
SPSB4-201ENST00000310546 DEFB136Q30KP8 78 aa12.72□□□□□ -0.37
SPSB4-201ENST00000310546 UBE2L6O14933 153 aa12.72□□□□□ -0.37
SPSB4-201ENST00000310546 PRO0628Q9UI54 55 aa12.72□□□□□ -0.37
SPSB4-201ENST00000310546 TRGV1A0A0A0MS02 117 aa12.71□□□□□ -0.37
SPSB4-201ENST00000310546 C18orf65Q6ZTR6 163 aa12.7□□□□□ -0.38
SPSB4-201ENST00000310546 C11orf68Q9H3H3 251 aaKnown RBP12.7□□□□□ -0.38
SPSB4-201ENST00000310546 H7BZZ5 65 aa12.69□□□□□ -0.38
SPSB4-201ENST00000310546 J3QLI3 93 aa12.69□□□□□ -0.38
SPSB4-201ENST00000310546 UBL5Q9BZL1 73 aa12.69□□□□□ -0.38
SPSB4-201ENST00000310546 ATP5EP2Q5VTU8 51 aa12.68□□□□□ -0.38
SPSB4-201ENST00000310546 PKIGQ9Y2B9 76 aa12.68□□□□□ -0.38
SPSB4-201ENST00000310546 SERP1Q9Y6X1 66 aa12.68□□□□□ -0.38
SPSB4-201ENST00000310546 ATRQ13535 2644 aa12.67□□□□□ -0.38
SPSB4-201ENST00000310546 Q6ZTI0 123 aa12.67□□□□□ -0.38
SPSB4-201ENST00000310546 SNURFQ9Y675 71 aa12.67□□□□□ -0.38
SPSB4-201ENST00000310546 JMJD7-PLA2G4BH0Y9G9 81 aa12.67□□□□□ -0.38
SPSB4-201ENST00000310546 TMEM89A2RUT3 159 aa12.66□□□□□ -0.38
SPSB4-201ENST00000310546 A0A1W2PRX2 142 aa12.66□□□□□ -0.38
SPSB4-201ENST00000310546 VWFP04275 2813 aa12.65□□□□□ -0.38
SPSB4-201ENST00000310546 BAHCC1Q9P281 2608 aa12.65□□□□□ -0.38
SPSB4-201ENST00000310546 TENM1Q9UKZ4 2725 aa12.65□□□□□ -0.38
SPSB4-201ENST00000310546 K7EQD1 137 aa12.65□□□□□ -0.39
SPSB4-201ENST00000310546 RPL35AP18077 110 aaKnown RBP12.65□□□□□ -0.39
SPSB4-201ENST00000310546 UBE2E2Q96LR5 201 aa12.64□□□□□ -0.39
SPSB4-201ENST00000310546 F8P00451 2351 aa12.64□□□□□ -0.39
SPSB4-201ENST00000310546 ANK3Q12955 4377 aaKnown RBP12.64□□□□□ -0.39
SPSB4-201ENST00000310546 TRBV6-4A0A1B0GX49 114 aa12.64□□□□□ -0.39
SPSB4-201ENST00000310546 NSD1Q96L73 2696 aaPredicted RBP12.63□□□□□ -0.39
SPSB4-201ENST00000310546 IBA57-AS1B1ANH7 110 aa12.63□□□□□ -0.39
SPSB4-201ENST00000310546 FSHBP01225 129 aa12.63□□□□□ -0.39
SPSB4-201ENST00000310546 INSP01308 110 aa12.63□□□□□ -0.39
SPSB4-201ENST00000310546 PRR3P79522 188 aaKnown RBP12.63□□□□□ -0.39
SPSB4-201ENST00000310546 Q6YL49 198 aa12.63□□□□□ -0.39
SPSB4-201ENST00000310546 TMEM256-PLSCR3K7ERE1 68 aa12.62□□□□□ -0.39
SPSB4-201ENST00000310546 Q8N814 137 aa12.62□□□□□ -0.39
SPSB4-201ENST00000310546 SLURP1P55000 103 aa12.61□□□□□ -0.39
SPSB4-201ENST00000310546 LYPD5Q6UWN5 251 aa12.61□□□□□ -0.39
SPSB4-201ENST00000310546 RMI2Q96E14 147 aa12.61□□□□□ -0.39
SPSB4-201ENST00000310546 TRAV7A0A075B6U4 112 aa12.6□□□□□ -0.39
SPSB4-201ENST00000310546 HAMPP81172 84 aa12.6□□□□□ -0.39
SPSB4-201ENST00000310546 EPM2AB3EWF7 344 aa12.6□□□□□ -0.39
SPSB4-201ENST00000310546 F8WEM9 126 aa12.59□□□□□ -0.39
SPSB4-201ENST00000310546 C6orf226Q5I0X4 101 aa12.59□□□□□ -0.39
SPSB4-201ENST00000310546 FP248Q71RG6 208 aaPredicted RBP12.59□□□□□ -0.39
SPSB4-201ENST00000310546 TRBV10-1A0A0K0K1A3 114 aa12.59□□□□□ -0.39
SPSB4-201ENST00000310546 TRBV10-3A0A0K0K1G6 114 aa12.58□□□□□ -0.39
SPSB4-201ENST00000310546 ZNF702PQ9H963 129 aa12.58□□□□□ -0.39
SPSB4-201ENST00000310546 IGLV4-60A0A075B6I1 120 aa12.58□□□□□ -0.4
SPSB4-201ENST00000310546 TRAV10A0A0B4J240 114 aa12.58□□□□□ -0.4
SPSB4-201ENST00000310546 LOC100131303A0A0U1RQF7 123 aa12.58□□□□□ -0.4
SPSB4-201ENST00000310546 MAP6D1Q9H9H5 199 aa12.58□□□□□ -0.4
SPSB4-201ENST00000310546 ESM1Q9NQ30 184 aa12.58□□□□□ -0.4
SPSB4-201ENST00000310546 IGHV3OR16-9A0A0B4J2B5 98 aa12.58□□□□□ -0.4
SPSB4-201ENST00000310546 A8MTW9 85 aa12.58□□□□□ -0.4
SPSB4-201ENST00000310546 LY6G6DO95868 133 aa12.57□□□□□ -0.4
SPSB4-201ENST00000310546 LINC00474Q9P2X8 69 aa12.57□□□□□ -0.4
SPSB4-201ENST00000310546 RBM3P98179 157 aaKnown RBP12.57□□□□□ -0.4
SPSB4-201ENST00000310546 TMEM86BQ8N661 226 aa12.56□□□□□ -0.4
SPSB4-201ENST00000310546 C16orf95Q9H693 158 aa12.56□□□□□ -0.4
SPSB4-201ENST00000310546 SMIM26A0A096LP01 95 aa12.56□□□□□ -0.4
SPSB4-201ENST00000310546 NBEAL2Q6ZNJ1 2754 aa12.56□□□□□ -0.4
SPSB4-201ENST00000310546 KLKP1Q107X0 134 aa12.55□□□□□ -0.4
SPSB4-201ENST00000310546 LINC01547P58512 204 aaPredicted RBP12.54□□□□□ -0.4
SPSB4-201ENST00000310546 KRTAP1-1Q07627 177 aa12.54□□□□□ -0.4
SPSB4-201ENST00000310546 LINC00167Q96N53 147 aa12.54□□□□□ -0.4
SPSB4-201ENST00000310546 DNAJC9-AS1A6NH13 148 aa12.54□□□□□ -0.4
SPSB4-201ENST00000310546 NANOS2P60321 138 aaKnown RBP12.54□□□□□ -0.4
SPSB4-201ENST00000310546 BRK1Q8WUW1 75 aa12.54□□□□□ -0.4
SPSB4-201ENST00000310546 M0R2N4 97 aa12.53□□□□□ -0.4
SPSB4-201ENST00000310546 NOP10Q9NPE3 64 aaKnown RBP12.53□□□□□ -0.4
SPSB4-201ENST00000310546 A0A087WZ39 114 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms