RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 KRTAP4-5Q9BYR2 181 aa12.6□□□□□ -0.39
VEGFB-201ENST00000309422 CHTOPQ9Y3Y2 248 aaKnown RBP12.6□□□□□ -0.39
VEGFB-201ENST00000309422 SMIM1B2RUZ4 78 aa12.59□□□□□ -0.39
VEGFB-201ENST00000309422 SERF1AO75920 110 aa12.59□□□□□ -0.39
VEGFB-201ENST00000309422 LEPROTL1O95214 131 aa12.59□□□□□ -0.39
VEGFB-201ENST00000309422 SPINK8P0C7L1 97 aa12.59□□□□□ -0.39
VEGFB-201ENST00000309422 C2orf82Q6UX34 121 aa12.59□□□□□ -0.39
VEGFB-201ENST00000309422 COX7B2Q8TF08 81 aa12.59□□□□□ -0.39
VEGFB-201ENST00000309422 C6orf48Q9UBA6 75 aa12.59□□□□□ -0.39
VEGFB-201ENST00000309422 HSPB8Q9UJY1 196 aa12.59□□□□□ -0.39
VEGFB-201ENST00000309422 F8VRH5 84 aa12.58□□□□□ -0.4
VEGFB-201ENST00000309422 TMEM170BQ5T4T1 132 aa12.58□□□□□ -0.4
VEGFB-201ENST00000309422 FAM19A2Q8N3H0 131 aa12.58□□□□□ -0.4
VEGFB-201ENST00000309422 TLX1NBP0CAT3 122 aa12.57□□□□□ -0.4
VEGFB-201ENST00000309422 C10orf25Q5T742 122 aa12.57□□□□□ -0.4
VEGFB-201ENST00000309422 TRAV12-1A0A0B4J245 112 aa12.56□□□□□ -0.4
VEGFB-201ENST00000309422 S100A1P23297 94 aa12.56□□□□□ -0.4
VEGFB-201ENST00000309422 NDUFC2-KCTD14E9PQ53 114 aa12.56□□□□□ -0.4
VEGFB-201ENST00000309422 H0Y8G0 127 aa12.56□□□□□ -0.4
VEGFB-201ENST00000309422 GAGE2EQ4V326 116 aa12.56□□□□□ -0.4
VEGFB-201ENST00000309422 GAGE2DQ9UEU5 116 aa12.56□□□□□ -0.4
VEGFB-201ENST00000309422 ZNF22P17026 224 aaPredicted RBP12.55□□□□□ -0.4
VEGFB-201ENST00000309422 SFTA2Q6UW10 78 aa12.54□□□□□ -0.4
VEGFB-201ENST00000309422 KRTAP17-1Q9BYP8 105 aa12.54□□□□□ -0.4
VEGFB-201ENST00000309422 C11orf86A6NJI1 115 aa12.52□□□□□ -0.41
VEGFB-201ENST00000309422 C9orf116Q5BN46 136 aaPredicted RBP12.52□□□□□ -0.41
VEGFB-201ENST00000309422 Q6ZRP5 223 aa12.52□□□□□ -0.41
VEGFB-201ENST00000309422 ABCA13Q86UQ4 5058 aa12.51□□□□□ -0.41
VEGFB-201ENST00000309422 FABP4P15090 132 aa12.51□□□□□ -0.41
VEGFB-201ENST00000309422 MAP1LC3CQ9BXW4 147 aa12.5□□□□□ -0.41
VEGFB-201ENST00000309422 VPS13BQ7Z7G8 4022 aa12.5□□□□□ -0.41
VEGFB-201ENST00000309422 PCLOQ9Y6V0 5065 aa12.5□□□□□ -0.41
VEGFB-201ENST00000309422 HIST1H2BKO60814 126 aa12.49□□□□□ -0.41
VEGFB-201ENST00000309422 HIST1H2BJP06899 126 aa12.49□□□□□ -0.41
VEGFB-201ENST00000309422 HIST1H2BOP23527 126 aa12.49□□□□□ -0.41
VEGFB-201ENST00000309422 HIST1H2BBP33778 126 aa12.49□□□□□ -0.41
VEGFB-201ENST00000309422 HIST1H2BDP58876 126 aa12.49□□□□□ -0.41
VEGFB-201ENST00000309422 HIST1H2BCP62807 126 aa12.49□□□□□ -0.41
VEGFB-201ENST00000309422 HIST2H2BEQ16778 126 aa12.49□□□□□ -0.41
VEGFB-201ENST00000309422 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.49□□□□□ -0.41
VEGFB-201ENST00000309422 HIST1H2BHQ93079 126 aa12.49□□□□□ -0.41
VEGFB-201ENST00000309422 HIST1H2BNQ99877 126 aa12.49□□□□□ -0.41
VEGFB-201ENST00000309422 HIST1H2BMQ99879 126 aa12.49□□□□□ -0.41
VEGFB-201ENST00000309422 IGLV5-39A0A0G2JS06 123 aa12.47□□□□□ -0.41
VEGFB-201ENST00000309422 PLNP26678 52 aa12.47□□□□□ -0.41
VEGFB-201ENST00000309422 FAM19A5Q7Z5A7 132 aaPredicted RBP12.47□□□□□ -0.41
VEGFB-201ENST00000309422 ATP6V1G1O75348 118 aa12.46□□□□□ -0.41
VEGFB-201ENST00000309422 LINC00310P59036 64 aa12.46□□□□□ -0.41
VEGFB-201ENST00000309422 HERVK_113P61574 105 aa12.45□□□□□ -0.42
VEGFB-201ENST00000309422 A0A1W2PNN7 141 aa12.44□□□□□ -0.42
VEGFB-201ENST00000309422 ODF1Q14990 250 aa12.43□□□□□ -0.42
VEGFB-201ENST00000309422 TMEM223A0PJW6 202 aa12.43□□□□□ -0.42
VEGFB-201ENST00000309422 M0QXV9 152 aa12.43□□□□□ -0.42
VEGFB-201ENST00000309422 DPM2O94777 84 aa12.43□□□□□ -0.42
VEGFB-201ENST00000309422 UBE2BP63146 152 aa12.43□□□□□ -0.42
VEGFB-201ENST00000309422 NUPR1O60356 82 aa12.42□□□□□ -0.42
VEGFB-201ENST00000309422 PRR3P79522 188 aaKnown RBP12.42□□□□□ -0.42
VEGFB-201ENST00000309422 XAGE1AQ9HD64 81 aa12.42□□□□□ -0.42
VEGFB-201ENST00000309422 IGKCP01834 107 aa12.4□□□□□ -0.42
VEGFB-201ENST00000309422 PFN2P35080 140 aa12.4□□□□□ -0.42
VEGFB-201ENST00000309422 COX17Q14061 63 aa12.4□□□□□ -0.42
VEGFB-201ENST00000309422 PHF5AQ7RTV0 110 aaKnown RBP12.4□□□□□ -0.42
VEGFB-201ENST00000309422 ERG28Q9UKR5 140 aa12.4□□□□□ -0.42
VEGFB-201ENST00000309422 FAM168BA1KXE4 195 aa12.39□□□□□ -0.43
VEGFB-201ENST00000309422 LBHQ53QV2 105 aaPredicted RBP12.39□□□□□ -0.43
VEGFB-201ENST00000309422 C9orf129Q5T035 196 aaKnown RBP12.39□□□□□ -0.43
VEGFB-201ENST00000309422 J3QL48 77 aa12.38□□□□□ -0.43
VEGFB-201ENST00000309422 SRRM2Q9UQ35 2752 aaKnown RBP12.37□□□□□ -0.43
VEGFB-201ENST00000309422 LINC00587B1AMM8 73 aa12.37□□□□□ -0.43
VEGFB-201ENST00000309422 KRTAP10-4P60372 401 aaPredicted RBP12.37□□□□□ -0.43
VEGFB-201ENST00000309422 ZNF625Q96I27 306 aaPredicted RBP12.37□□□□□ -0.43
VEGFB-201ENST00000309422 HERV-K104P63124 156 aa12.36□□□□□ -0.43
VEGFB-201ENST00000309422 MEIG1Q5JSS6 88 aa12.36□□□□□ -0.43
VEGFB-201ENST00000309422 PLEKHB2Q96CS7 222 aa12.36□□□□□ -0.43
VEGFB-201ENST00000309422 NKAPP1Q8N9T2 125 aa12.35□□□□□ -0.43
VEGFB-201ENST00000309422 MYMXA0A1B0GTQ4 84 aa12.34□□□□□ -0.43
VEGFB-201ENST00000309422 C20orf202A1L168 122 aa12.34□□□□□ -0.43
VEGFB-201ENST00000309422 SYS1-DBNDD2H3BUS1 97 aa12.34□□□□□ -0.43
VEGFB-201ENST00000309422 LINC00158P58513 81 aa12.34□□□□□ -0.43
VEGFB-201ENST00000309422 C1orf137Q5JT78 98 aa12.34□□□□□ -0.43
VEGFB-201ENST00000309422 COA6Q5JTJ3 125 aaKnown RBP12.34□□□□□ -0.43
VEGFB-201ENST00000309422 PMCHL2Q9BQD1 86 aa12.34□□□□□ -0.43
VEGFB-201ENST00000309422 LGALS3P17931 250 aaKnown RBP12.33□□□□□ -0.44
VEGFB-201ENST00000309422 NDUFA12Q9UI09 145 aa12.33□□□□□ -0.44
VEGFB-201ENST00000309422 PET117Q6UWS5 81 aa12.32□□□□□ -0.44
VEGFB-201ENST00000309422 TP73-AS1Q9UF72 201 aa12.32□□□□□ -0.44
VEGFB-201ENST00000309422 PSORS1C2Q9UIG4 136 aa12.32□□□□□ -0.44
VEGFB-201ENST00000309422 LEPROTO15243 131 aa12.31□□□□□ -0.44
VEGFB-201ENST00000309422 RPL24P83731 157 aaKnown RBP12.31□□□□□ -0.44
VEGFB-201ENST00000309422 C22orf24Q9Y442 160 aa12.31□□□□□ -0.44
VEGFB-201ENST00000309422 OXTP01178 125 aa12.3□□□□□ -0.44
VEGFB-201ENST00000309422 S100A6P06703 90 aa12.3□□□□□ -0.44
VEGFB-201ENST00000309422 SERTAD4-AS1Q5TG53 156 aa12.3□□□□□ -0.44
VEGFB-201ENST00000309422 MRPL55Q7Z7F7 128 aaKnown RBP12.3□□□□□ -0.44
VEGFB-201ENST00000309422 S100A2P29034 98 aa12.3□□□□□ -0.44
VEGFB-201ENST00000309422 NMUP48645 174 aa12.3□□□□□ -0.44
VEGFB-201ENST00000309422 KRTDAPP60985 99 aa12.3□□□□□ -0.44
VEGFB-201ENST00000309422 SPINK6Q6UWN8 80 aa12.3□□□□□ -0.44
VEGFB-201ENST00000309422 PLA2G2DQ9UNK4 145 aa12.3□□□□□ -0.44
VEGFB-201ENST00000309422 AKR1D1P51857 326 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms