RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 MYCBP2O75592 4640 aa14.73□□□□□ -0.05
GBX1-201ENST00000297537 TOMM7Q9P0U1 55 aa14.72□□□□□ -0.05
GBX1-201ENST00000297537 PRSS2P07478 247 aa14.71□□□□□ -0.05
GBX1-201ENST00000297537 NDUFA6P56556 154 aa14.71□□□□□ -0.05
GBX1-201ENST00000297537 LINC00310P59036 64 aa14.71□□□□□ -0.05
GBX1-201ENST00000297537 C6orf226Q5I0X4 101 aa14.71□□□□□ -0.05
GBX1-201ENST00000297537 RPL37AP61513 92 aaKnown RBP14.7□□□□□ -0.06
GBX1-201ENST00000297537 RPL18AQ02543 176 aaKnown RBP14.7□□□□□ -0.06
GBX1-201ENST00000297537 Q6ZRP5 223 aa14.7□□□□□ -0.06
GBX1-201ENST00000297537 HSBP1O75506 76 aa14.69□□□□□ -0.06
GBX1-201ENST00000297537 A0A1W2PNN7 141 aa14.68□□□□□ -0.06
GBX1-201ENST00000297537 CKS1BP61024 79 aa14.68□□□□□ -0.06
GBX1-201ENST00000297537 FAM19A2Q8N3H0 131 aa14.68□□□□□ -0.06
GBX1-201ENST00000297537 SERF1AO75920 110 aa14.67□□□□□ -0.06
GBX1-201ENST00000297537 IFI27L1Q96BM0 104 aa14.67□□□□□ -0.06
GBX1-201ENST00000297537 FLG2Q5D862 2391 aaPredicted RBP14.67□□□□□ -0.06
GBX1-201ENST00000297537 SPINK8P0C7L1 97 aa14.66□□□□□ -0.06
GBX1-201ENST00000297537 ZNF22P17026 224 aaPredicted RBP14.66□□□□□ -0.06
GBX1-201ENST00000297537 C9orf116Q5BN46 136 aaPredicted RBP14.66□□□□□ -0.06
GBX1-201ENST00000297537 NDUFC2-KCTD14E9PQ53 114 aa14.65□□□□□ -0.06
GBX1-201ENST00000297537 H3BRM9 83 aa14.65□□□□□ -0.06
GBX1-201ENST00000297537 NUPR1O60356 82 aa14.65□□□□□ -0.06
GBX1-201ENST00000297537 COX7B2Q8TF08 81 aa14.65□□□□□ -0.06
GBX1-201ENST00000297537 TRAV12-1A0A0B4J245 112 aa14.64□□□□□ -0.07
GBX1-201ENST00000297537 F8VRH5 84 aa14.64□□□□□ -0.07
GBX1-201ENST00000297537 CXCL5P42830 114 aa14.64□□□□□ -0.07
GBX1-201ENST00000297537 C7orf33Q8WU49 177 aa14.64□□□□□ -0.07
GBX1-201ENST00000297537 IGLV5-39A0A0G2JS06 123 aa14.63□□□□□ -0.07
GBX1-201ENST00000297537 C11orf86A6NJI1 115 aa14.63□□□□□ -0.07
GBX1-201ENST00000297537 PKHD1L1Q86WI1 4243 aa14.63□□□□□ -0.07
GBX1-201ENST00000297537 CHTOPQ9Y3Y2 248 aaKnown RBP14.62□□□□□ -0.07
GBX1-201ENST00000297537 GAGE2EQ4V326 116 aa14.61□□□□□ -0.07
GBX1-201ENST00000297537 GAGE2DQ9UEU5 116 aa14.61□□□□□ -0.07
GBX1-201ENST00000297537 HNRNPA3P51991 378 aaKnown RBP14.6□□□□□ -0.07
GBX1-201ENST00000297537 LRP1Q07954 4544 aaKnown RBP14.59□□□□□ -0.07
GBX1-201ENST00000297537 HIST1H2BKO60814 126 aa14.58□□□□□ -0.08
GBX1-201ENST00000297537 LEPROTL1O95214 131 aa14.58□□□□□ -0.08
GBX1-201ENST00000297537 HIST1H2BJP06899 126 aa14.58□□□□□ -0.08
GBX1-201ENST00000297537 HIST1H2BOP23527 126 aa14.58□□□□□ -0.08
GBX1-201ENST00000297537 HIST1H2BBP33778 126 aa14.58□□□□□ -0.08
GBX1-201ENST00000297537 HIST1H2BDP58876 126 aa14.58□□□□□ -0.08
GBX1-201ENST00000297537 HIST1H2BCP62807 126 aa14.58□□□□□ -0.08
GBX1-201ENST00000297537 HIST2H2BEQ16778 126 aa14.58□□□□□ -0.08
GBX1-201ENST00000297537 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.58□□□□□ -0.08
GBX1-201ENST00000297537 HIST1H2BHQ93079 126 aa14.58□□□□□ -0.08
GBX1-201ENST00000297537 HIST1H2BNQ99877 126 aa14.58□□□□□ -0.08
GBX1-201ENST00000297537 HIST1H2BMQ99879 126 aa14.58□□□□□ -0.08
GBX1-201ENST00000297537 FAM168BA1KXE4 195 aa14.57□□□□□ -0.08
GBX1-201ENST00000297537 C9orf129Q5T035 196 aaKnown RBP14.57□□□□□ -0.08
GBX1-201ENST00000297537 KRTAP7-1Q8IUC3 87 aa14.57□□□□□ -0.08
GBX1-201ENST00000297537 FAT3Q8TDW7 4589 aa14.56□□□□□ -0.08
GBX1-201ENST00000297537 TMEM170BQ5T4T1 132 aa14.56□□□□□ -0.08
GBX1-201ENST00000297537 PRR3P79522 188 aaKnown RBP14.54□□□□□ -0.08
GBX1-201ENST00000297537 ODF1Q14990 250 aa14.54□□□□□ -0.08
GBX1-201ENST00000297537 PHF5AQ7RTV0 110 aaKnown RBP14.53□□□□□ -0.08
GBX1-201ENST00000297537 HSPB8Q9UJY1 196 aa14.53□□□□□ -0.08
GBX1-201ENST00000297537 TMEM223A0PJW6 202 aa14.51□□□□□ -0.09
GBX1-201ENST00000297537 FABP4P15090 132 aa14.51□□□□□ -0.09
GBX1-201ENST00000297537 KRTAP29-1A8MX34 341 aaPredicted RBP14.5□□□□□ -0.09
GBX1-201ENST00000297537 S100A1P23297 94 aa14.49□□□□□ -0.09
GBX1-201ENST00000297537 FAM19A5Q7Z5A7 132 aaPredicted RBP14.49□□□□□ -0.09
GBX1-201ENST00000297537 XAGE1AQ9HD64 81 aa14.49□□□□□ -0.09
GBX1-201ENST00000297537 HERC1Q15751 4861 aa14.48□□□□□ -0.09
GBX1-201ENST00000297537 H0Y8G0 127 aa14.47□□□□□ -0.09
GBX1-201ENST00000297537 ZNF625Q96I27 306 aaPredicted RBP14.47□□□□□ -0.09
GBX1-201ENST00000297537 COA6Q5JTJ3 125 aaKnown RBP14.45□□□□□ -0.1
GBX1-201ENST00000297537 SERTAD4-AS1Q5TG53 156 aa14.45□□□□□ -0.1
GBX1-201ENST00000297537 SFTA2Q6UW10 78 aa14.45□□□□□ -0.1
GBX1-201ENST00000297537 KRTAP11-1Q8IUC1 163 aa14.45□□□□□ -0.1
GBX1-201ENST00000297537 PSORS1C2Q9UIG4 136 aa14.45□□□□□ -0.1
GBX1-201ENST00000297537 M0QXV9 152 aa14.44□□□□□ -0.1
GBX1-201ENST00000297537 ATP6V1G1O75348 118 aa14.44□□□□□ -0.1
GBX1-201ENST00000297537 DMBT1Q9UGM3 2413 aaPredicted RBP14.44□□□□□ -0.1
GBX1-201ENST00000297537 OXTP01178 125 aa14.43□□□□□ -0.1
GBX1-201ENST00000297537 SRSF9Q13242 221 aaKnown RBP eCLIP14.43□□□□□ -0.1
GBX1-201ENST00000297537 PLNP26678 52 aa14.42□□□□□ -0.1
GBX1-201ENST00000297537 COX17Q14061 63 aa14.42□□□□□ -0.1
GBX1-201ENST00000297537 MAP1LC3CQ9BXW4 147 aa14.42□□□□□ -0.1
GBX1-201ENST00000297537 PLA2G2DQ9UNK4 145 aa14.42□□□□□ -0.1
GBX1-201ENST00000297537 ERG28Q9UKR5 140 aa14.41□□□□□ -0.1
GBX1-201ENST00000297537 C22orf24Q9Y442 160 aa14.41□□□□□ -0.1
GBX1-201ENST00000297537 PFN2P35080 140 aa14.4□□□□□ -0.1
GBX1-201ENST00000297537 DPM2O94777 84 aa14.39□□□□□ -0.11
GBX1-201ENST00000297537 SPINK6Q6UWN8 80 aa14.38□□□□□ -0.11
GBX1-201ENST00000297537 PMCHL2Q9BQD1 86 aa14.38□□□□□ -0.11
GBX1-201ENST00000297537 TP73-AS1Q9UF72 201 aa14.38□□□□□ -0.11
GBX1-201ENST00000297537 IGKCP01834 107 aa14.37□□□□□ -0.11
GBX1-201ENST00000297537 SYS1-DBNDD2H3BUS1 97 aa14.36□□□□□ -0.11
GBX1-201ENST00000297537 J3QL48 77 aa14.36□□□□□ -0.11
GBX1-201ENST00000297537 C1orf137Q5JT78 98 aa14.36□□□□□ -0.11
GBX1-201ENST00000297537 SND1-IT1Q9HBX3 110 aa14.35□□□□□ -0.11
GBX1-201ENST00000297537 IGLV5-37A0A075B6J1 123 aa14.34□□□□□ -0.11
GBX1-201ENST00000297537 UBE2BP63146 152 aa14.34□□□□□ -0.11
GBX1-201ENST00000297537 LBHQ53QV2 105 aaPredicted RBP14.34□□□□□ -0.11
GBX1-201ENST00000297537 LEPROTO15243 131 aa14.33□□□□□ -0.12
GBX1-201ENST00000297537 MRPL55Q7Z7F7 128 aaKnown RBP14.33□□□□□ -0.12
GBX1-201ENST00000297537 TSPEAR-AS2P59090 65 aa14.32□□□□□ -0.12
GBX1-201ENST00000297537 NDUFA12Q9UI09 145 aa14.32□□□□□ -0.12
GBX1-201ENST00000297537 IGLV7-43P04211 117 aa14.31□□□□□ -0.12
GBX1-201ENST00000297537 HERV-K104P63124 156 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms