RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 MAJINQ3KP22 176 aa6□□□□□ -1.45
HMHB1-201ENST00000289448 SERTAD4-AS1Q5TG53 156 aa6□□□□□ -1.45
HMHB1-201ENST00000289448 A0A096LNI7 61 aa5.99□□□□□ -1.45
HMHB1-201ENST00000289448 IGHV1-58A0A0C4DH39 117 aa5.99□□□□□ -1.45
HMHB1-201ENST00000289448 NPSP0C0P6 89 aa5.99□□□□□ -1.45
HMHB1-201ENST00000289448 DDTP30046 118 aa5.99□□□□□ -1.45
HMHB1-201ENST00000289448 RNASE13Q5GAN3 156 aaKnown RBP5.99□□□□□ -1.45
HMHB1-201ENST00000289448 CD164L2Q6UWJ8 174 aa5.99□□□□□ -1.45
HMHB1-201ENST00000289448 PMCHL2Q9BQD1 86 aa5.99□□□□□ -1.45
HMHB1-201ENST00000289448 F8VRH5 84 aa5.98□□□□□ -1.45
HMHB1-201ENST00000289448 DPM2O94777 84 aa5.98□□□□□ -1.45
HMHB1-201ENST00000289448 PLNP26678 52 aa5.98□□□□□ -1.45
HMHB1-201ENST00000289448 RPL39P62891 51 aaKnown RBP5.98□□□□□ -1.45
HMHB1-201ENST00000289448 SS18Q15532 418 aa5.98□□□□□ -1.45
HMHB1-201ENST00000289448 PAPPA-AS1Q5QFB9 102 aa5.98□□□□□ -1.45
HMHB1-201ENST00000289448 Q6ZRU5 148 aa5.98□□□□□ -1.45
HMHB1-201ENST00000289448 STPG4Q8N801 248 aa5.98□□□□□ -1.45
HMHB1-201ENST00000289448 FAM104AQ969W3 186 aa5.98□□□□□ -1.45
HMHB1-201ENST00000289448 MIEN1Q9BRT3 115 aa5.98□□□□□ -1.45
HMHB1-201ENST00000289448 SPANXA1Q9NS26 97 aa5.98□□□□□ -1.45
HMHB1-201ENST00000289448 UBE2D4Q9Y2X8 147 aa5.98□□□□□ -1.45
HMHB1-201ENST00000289448 PYGO1Q9Y3Y4 419 aa5.98□□□□□ -1.45
HMHB1-201ENST00000289448 IGKCP01834 107 aa5.97□□□□□ -1.45
HMHB1-201ENST00000289448 IGLC3P0DOY3 106 aa5.97□□□□□ -1.45
HMHB1-201ENST00000289448 PMVKQ15126 192 aa5.97□□□□□ -1.45
HMHB1-201ENST00000289448 MRPL35Q9NZE8 188 aaKnown RBP5.97□□□□□ -1.45
HMHB1-201ENST00000289448 UQCR10Q9UDW1 63 aa5.97□□□□□ -1.45
HMHB1-201ENST00000289448 CHTOPQ9Y3Y2 248 aaKnown RBP5.97□□□□□ -1.45
HMHB1-201ENST00000289448 CSDC2Q9Y534 153 aaKnown RBP5.97□□□□□ -1.45
HMHB1-201ENST00000289448 LRP2P98164 4655 aa5.97□□□□□ -1.45
HMHB1-201ENST00000289448 IGLV4-69A0A075B6H9 119 aa5.96□□□□□ -1.46
HMHB1-201ENST00000289448 TRAV13-1A0A0B4J241 112 aa5.96□□□□□ -1.46
HMHB1-201ENST00000289448 LINC00587B1AMM8 73 aa5.96□□□□□ -1.46
HMHB1-201ENST00000289448 PRR3P79522 188 aaKnown RBP5.96□□□□□ -1.46
HMHB1-201ENST00000289448 SYCNQ0VAF6 134 aa5.96□□□□□ -1.46
HMHB1-201ENST00000289448 SMAGPQ0VAQ4 97 aa5.96□□□□□ -1.46
HMHB1-201ENST00000289448 Q6ZUT4 128 aa5.96□□□□□ -1.46
HMHB1-201ENST00000289448 C7orf33Q8WU49 177 aa5.96□□□□□ -1.46
HMHB1-201ENST00000289448 CARD19Q96LW7 228 aa5.96□□□□□ -1.46
HMHB1-201ENST00000289448 TIMM21Q9BVV7 248 aa5.96□□□□□ -1.46
HMHB1-201ENST00000289448 CST9LQ9H4G1 147 aa5.96□□□□□ -1.46
HMHB1-201ENST00000289448 COX7A2LO14548 114 aa5.95□□□□□ -1.46
HMHB1-201ENST00000289448 PLA2G2DQ9UNK4 145 aa5.95□□□□□ -1.46
HMHB1-201ENST00000289448 IGLV4-3A0A075B6K6 122 aa5.94□□□□□ -1.46
HMHB1-201ENST00000289448 ZNF561-AS1K7EIQ3 104 aa5.94□□□□□ -1.46
HMHB1-201ENST00000289448 MRPS36P82909 103 aaKnown RBP5.94□□□□□ -1.46
HMHB1-201ENST00000289448 C5orf38Q86SI9 138 aa5.94□□□□□ -1.46
HMHB1-201ENST00000289448 OPRPNQ99935 248 aaPredicted RBP5.94□□□□□ -1.46
HMHB1-201ENST00000289448 VCX2Q9H322 139 aa5.94□□□□□ -1.46
HMHB1-201ENST00000289448 LINC00474Q9P2X8 69 aa5.94□□□□□ -1.46
HMHB1-201ENST00000289448 COX8AP10176 69 aa5.93□□□□□ -1.46
HMHB1-201ENST00000289448 MALP21145 153 aa5.93□□□□□ -1.46
HMHB1-201ENST00000289448 PTTG1IPP53801 180 aa5.93□□□□□ -1.46
HMHB1-201ENST00000289448 ANKRD39Q53RE8 183 aa5.93□□□□□ -1.46
HMHB1-201ENST00000289448 ZC2HC1BQ5TFG8 222 aa5.93□□□□□ -1.46
HMHB1-201ENST00000289448 SLC25A34Q6PIV7 304 aa5.93□□□□□ -1.46
HMHB1-201ENST00000289448 C14orf144Q96I85 54 aa5.93□□□□□ -1.46
HMHB1-201ENST00000289448 AMELXQ99217 191 aa5.93□□□□□ -1.46
HMHB1-201ENST00000289448 A0A0J9YXV3 536 aa5.92□□□□□ -1.46
HMHB1-201ENST00000289448 A0A1W2PNN7 141 aa5.92□□□□□ -1.46
HMHB1-201ENST00000289448 C11orf86A6NJI1 115 aa5.92□□□□□ -1.46
HMHB1-201ENST00000289448 DLEU1O43261 78 aa5.92□□□□□ -1.46
HMHB1-201ENST00000289448 GAGE2BQ13066 116 aa5.92□□□□□ -1.46
HMHB1-201ENST00000289448 C2orf88Q9BSF0 95 aa5.92□□□□□ -1.46
HMHB1-201ENST00000289448 LOC107984640A0A0U1RRK4 108 aa5.91□□□□□ -1.46
HMHB1-201ENST00000289448 HERVK_113P61574 105 aa5.91□□□□□ -1.46
HMHB1-201ENST00000289448 LINC01600Q96MT4 127 aa5.91□□□□□ -1.46
HMHB1-201ENST00000289448 CAMK2N2Q96S95 79 aa5.91□□□□□ -1.46
HMHB1-201ENST00000289448 IGHV3OR16-9A0A0B4J2B5 98 aa5.9□□□□□ -1.46
HMHB1-201ENST00000289448 APOMO95445 188 aa5.9□□□□□ -1.46
HMHB1-201ENST00000289448 NMUP48645 174 aa5.9□□□□□ -1.46
HMHB1-201ENST00000289448 SPAG11BQ08648 103 aa5.9□□□□□ -1.46
HMHB1-201ENST00000289448 SRSF9Q13242 221 aaKnown RBP eCLIP5.9□□□□□ -1.46
HMHB1-201ENST00000289448 BOD1L2Q8IYS8 172 aa5.9□□□□□ -1.46
HMHB1-201ENST00000289448 C2orf48Q96LS8 159 aa5.9□□□□□ -1.46
HMHB1-201ENST00000289448 PKIGQ9Y2B9 76 aa5.9□□□□□ -1.46
HMHB1-201ENST00000289448 E9PLD3 99 aa5.89□□□□□ -1.47
HMHB1-201ENST00000289448 C9orf116Q5BN46 136 aaPredicted RBP5.89□□□□□ -1.47
HMHB1-201ENST00000289448 C10orf25Q5T742 122 aa5.89□□□□□ -1.47
HMHB1-201ENST00000289448 IGKV2D-26A0A0A0MRZ7 120 aa5.88□□□□□ -1.47
HMHB1-201ENST00000289448 TINCRA0A1B0GVN0 87 aa5.88□□□□□ -1.47
HMHB1-201ENST00000289448 M0R143 59 aa5.88□□□□□ -1.47
HMHB1-201ENST00000289448 UBE2D1P51668 147 aa5.88□□□□□ -1.47
HMHB1-201ENST00000289448 KRTAP10-8P60410 259 aa5.88□□□□□ -1.47
HMHB1-201ENST00000289448 SEC11AP67812 179 aa5.88□□□□□ -1.47
HMHB1-201ENST00000289448 CTAG1AP78358 180 aa5.88□□□□□ -1.47
HMHB1-201ENST00000289448 TMEM170BQ5T4T1 132 aa5.88□□□□□ -1.47
HMHB1-201ENST00000289448 SPINK6Q6UWN8 80 aa5.88□□□□□ -1.47
HMHB1-201ENST00000289448 Q6ZRP5 223 aa5.88□□□□□ -1.47
HMHB1-201ENST00000289448 PCP2Q8IVA1 136 aa5.88□□□□□ -1.47
HMHB1-201ENST00000289448 ORAOV1Q8WV07 137 aa5.88□□□□□ -1.47
HMHB1-201ENST00000289448 RNF213Q63HN8 5207 aa5.88□□□□□ -1.47
HMHB1-201ENST00000289448 ZNF22P17026 224 aaPredicted RBP5.87□□□□□ -1.47
HMHB1-201ENST00000289448 RPL18AQ02543 176 aaKnown RBP5.87□□□□□ -1.47
HMHB1-201ENST00000289448 RNF151Q2KHN1 245 aa5.87□□□□□ -1.47
HMHB1-201ENST00000289448 LBHQ53QV2 105 aaPredicted RBP5.87□□□□□ -1.47
HMHB1-201ENST00000289448 UNQ6190/PRO20217Q6UXQ8 127 aa5.87□□□□□ -1.47
HMHB1-201ENST00000289448 PHF5AQ7RTV0 110 aaKnown RBP5.87□□□□□ -1.47
HMHB1-201ENST00000289448 FAM19A3Q7Z5A8 133 aa5.87□□□□□ -1.47
HMHB1-201ENST00000289448 GEMIN7Q9H840 131 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms