RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 C22orf24Q9Y442 160 aa9.27□□□□□ -0.92
PRPF38A-201ENST00000257181 HCFC1P51610 2035 aa9.27□□□□□ -0.93
PRPF38A-201ENST00000257181 CCDC168Q8NDH2 2452 aa9.27□□□□□ -0.93
PRPF38A-201ENST00000257181 TRBV10-3A0A0K0K1G6 114 aa9.27□□□□□ -0.93
PRPF38A-201ENST00000257181 LINC01546A6NGU7 62 aa9.27□□□□□ -0.93
PRPF38A-201ENST00000257181 LINC00694P0DN24 101 aa9.26□□□□□ -0.93
PRPF38A-201ENST00000257181 SMIM11BQ8TCY0 68 aa9.26□□□□□ -0.93
PRPF38A-201ENST00000257181 LINC00526Q96FQ7 95 aa9.25□□□□□ -0.93
PRPF38A-201ENST00000257181 SPINK6Q6UWN8 80 aa9.25□□□□□ -0.93
PRPF38A-201ENST00000257181 LINC00612Q8N6U2 182 aa9.25□□□□□ -0.93
PRPF38A-201ENST00000257181 DOPEY1Q5JWR5 2465 aa9.24□□□□□ -0.93
PRPF38A-201ENST00000257181 C14orf132Q9NPU4 83 aa9.24□□□□□ -0.93
PRPF38A-201ENST00000257181 ZNF462Q96JM2 2506 aa9.24□□□□□ -0.93
PRPF38A-201ENST00000257181 Q6ZSN1 163 aa9.24□□□□□ -0.93
PRPF38A-201ENST00000257181 CSNK1G2-AS1Q8NCQ2 148 aa9.23□□□□□ -0.93
PRPF38A-201ENST00000257181 Q8NBF4 154 aa9.23□□□□□ -0.93
PRPF38A-201ENST00000257181 K7ERS5 55 aa9.23□□□□□ -0.93
PRPF38A-201ENST00000257181 PRR15LQ9BU68 103 aa9.22□□□□□ -0.93
PRPF38A-201ENST00000257181 IGLV5-39A0A0G2JS06 123 aa9.21□□□□□ -0.93
PRPF38A-201ENST00000257181 FAM19A3Q7Z5A8 133 aa9.21□□□□□ -0.94
PRPF38A-201ENST00000257181 FAM236DA0A1B0GTK5 79 aa9.21□□□□□ -0.94
PRPF38A-201ENST00000257181 FAM236CP0DP71 79 aa9.21□□□□□ -0.94
PRPF38A-201ENST00000257181 KRTAP10-3P60369 221 aa9.2□□□□□ -0.94
PRPF38A-201ENST00000257181 APLNQ9ULZ1 77 aa9.2□□□□□ -0.94
PRPF38A-201ENST00000257181 FOXI1Q12951 378 aa9.2□□□□□ -0.94
PRPF38A-201ENST00000257181 Q8N814 137 aa9.2□□□□□ -0.94
PRPF38A-201ENST00000257181 IGLV5-45A0A087WSX0 123 aa9.2□□□□□ -0.94
PRPF38A-201ENST00000257181 BCE1O60756 84 aa9.2□□□□□ -0.94
PRPF38A-201ENST00000257181 IGHV3OR16-9A0A0B4J2B5 98 aa9.19□□□□□ -0.94
PRPF38A-201ENST00000257181 SMCR5Q8TEV8 140 aa9.19□□□□□ -0.94
PRPF38A-201ENST00000257181 TRIAP1O43715 76 aa9.19□□□□□ -0.94
PRPF38A-201ENST00000257181 TYMSOSQ8TAI1 123 aa9.18□□□□□ -0.94
PRPF38A-201ENST00000257181 XGP55808 180 aa9.18□□□□□ -0.94
PRPF38A-201ENST00000257181 EP400Q96L91 3159 aa9.17□□□□□ -0.94
PRPF38A-201ENST00000257181 HRCT1Q6UXD1 115 aa9.17□□□□□ -0.94
PRPF38A-201ENST00000257181 ATP5EP56381 51 aaPredicted RBP9.17□□□□□ -0.94
PRPF38A-201ENST00000257181 YPEL4Q96NS1 127 aa9.16□□□□□ -0.94
PRPF38A-201ENST00000257181 TTTY13Q9BZ97 58 aa9.16□□□□□ -0.94
PRPF38A-201ENST00000257181 SONP18583 2426 aaKnown RBP9.16□□□□□ -0.94
PRPF38A-201ENST00000257181 NDUFC1O43677 76 aa9.15□□□□□ -0.94
PRPF38A-201ENST00000257181 ABCA2Q9BZC7 2435 aa9.15□□□□□ -0.94
PRPF38A-201ENST00000257181 NTM-AS1Q6ZSK4 140 aa9.15□□□□□ -0.95
PRPF38A-201ENST00000257181 LINC00476Q8WZB0 136 aa9.15□□□□□ -0.95
PRPF38A-201ENST00000257181 A0A087WTM6 91 aa9.14□□□□□ -0.95
PRPF38A-201ENST00000257181 NOTCH3Q9UM47 2321 aa9.14□□□□□ -0.95
PRPF38A-201ENST00000257181 ANKRD11Q6UB99 2663 aaPredicted RBP9.13□□□□□ -0.95
PRPF38A-201ENST00000257181 IGKV3D-7A0A0C4DH55 119 aa9.13□□□□□ -0.95
PRPF38A-201ENST00000257181 MAPKAPK5-AS1Q8N8E1 139 aa9.13□□□□□ -0.95
PRPF38A-201ENST00000257181 PRR14LQ5THK1 2151 aa9.13□□□□□ -0.95
PRPF38A-201ENST00000257181 LINC00167Q96N53 147 aa9.12□□□□□ -0.95
PRPF38A-201ENST00000257181 LINC00575Q6W349 94 aa9.12□□□□□ -0.95
PRPF38A-201ENST00000257181 IMUPQ9GZP8 106 aa9.12□□□□□ -0.95
PRPF38A-201ENST00000257181 ZNF575Q86XF7 245 aa9.11□□□□□ -0.95
PRPF38A-201ENST00000257181 TAX1BP3O14907 124 aa9.11□□□□□ -0.95
PRPF38A-201ENST00000257181 C6orf48Q9UBA6 75 aa9.11□□□□□ -0.95
PRPF38A-201ENST00000257181 SERP1Q9Y6X1 66 aa9.11□□□□□ -0.95
PRPF38A-201ENST00000257181 ENHOQ6UWT2 76 aa9.11□□□□□ -0.95
PRPF38A-201ENST00000257181 ARHGAP32A7KAX9 2087 aa9.11□□□□□ -0.95
PRPF38A-201ENST00000257181 LRRK2Q5S007 2527 aa9.11□□□□□ -0.95
PRPF38A-201ENST00000257181 Q8N9L7 120 aa9.11□□□□□ -0.95
PRPF38A-201ENST00000257181 PLA2G2DQ9UNK4 145 aa9.11□□□□□ -0.95
PRPF38A-201ENST00000257181 TLX1NBP0CAT3 122 aa9.1□□□□□ -0.95
PRPF38A-201ENST00000257181 PKD1L2Q7Z442 2459 aa9.09□□□□□ -0.95
PRPF38A-201ENST00000257181 SLPIP03973 132 aa9.09□□□□□ -0.95
PRPF38A-201ENST00000257181 Q6ZVQ6 151 aa9.09□□□□□ -0.95
PRPF38A-201ENST00000257181 SSBP3-AS1Q7Z2R9 100 aa9.09□□□□□ -0.95
PRPF38A-201ENST00000257181 TNCP24821 2201 aa9.09□□□□□ -0.95
PRPF38A-201ENST00000257181 PRR34Q9NV39 138 aa9.08□□□□□ -0.96
PRPF38A-201ENST00000257181 V9GYY9 64 aa9.08□□□□□ -0.96
PRPF38A-201ENST00000257181 C8orf87E5RJ46 101 aa9.08□□□□□ -0.96
PRPF38A-201ENST00000257181 CASC10Q5T4H9 136 aa9.08□□□□□ -0.96
PRPF38A-201ENST00000257181 SORL1Q92673 2214 aa9.08□□□□□ -0.96
PRPF38A-201ENST00000257181 CNBPP62633 177 aaKnown RBP9.07□□□□□ -0.96
PRPF38A-201ENST00000257181 EPM2AB3EWF7 344 aa9.07□□□□□ -0.96
PRPF38A-201ENST00000257181 TP53AIP1Q9HCN2 124 aa9.06□□□□□ -0.96
PRPF38A-201ENST00000257181 GAS8-AS1O95177 125 aa9.06□□□□□ -0.96
PRPF38A-201ENST00000257181 C9orf163Q8N9P6 203 aa9.06□□□□□ -0.96
PRPF38A-201ENST00000257181 CHD8Q9HCK8 2581 aa9.05□□□□□ -0.96
PRPF38A-201ENST00000257181 Q6ZRX8 168 aa9.05□□□□□ -0.96
PRPF38A-201ENST00000257181 FAM240AA0A1B0GVK7 77 aa9.04□□□□□ -0.96
PRPF38A-201ENST00000257181 PCP4P48539 62 aa9.04□□□□□ -0.96
PRPF38A-201ENST00000257181 WNK1Q9H4A3 2382 aa9.04□□□□□ -0.96
PRPF38A-201ENST00000257181 ELOF1P60002 83 aaKnown RBP9.04□□□□□ -0.96
PRPF38A-201ENST00000257181 PRLHP81277 87 aa9.04□□□□□ -0.96
PRPF38A-201ENST00000257181 PIEZO2Q9H5I5 2752 aa9.03□□□□□ -0.96
PRPF38A-201ENST00000257181 IGHV6-1A0A0B4J1U7 121 aa9.03□□□□□ -0.96
PRPF38A-201ENST00000257181 ATP11AUNQ6ZP68 121 aa9.01□□□□□ -0.97
PRPF38A-201ENST00000257181 FAM236AA0A1B0GUQ0 79 aa9.01□□□□□ -0.97
PRPF38A-201ENST00000257181 FAM236BA0A1B0GV22 79 aa9.01□□□□□ -0.97
PRPF38A-201ENST00000257181 MOBPQ13875 183 aa9.01□□□□□ -0.97
PRPF38A-201ENST00000257181 PHF5AQ7RTV0 110 aaKnown RBP9.01□□□□□ -0.97
PRPF38A-201ENST00000257181 WFDC2Q14508 124 aa9□□□□□ -0.97
PRPF38A-201ENST00000257181 ZNF861PO60384 105 aa8.99□□□□□ -0.97
PRPF38A-201ENST00000257181 WFDC13Q8IUB5 93 aa8.99□□□□□ -0.97
PRPF38A-201ENST00000257181 LINC00304Q8N9R0 145 aa8.99□□□□□ -0.97
PRPF38A-201ENST00000257181 ANKRD17O75179 2603 aaKnown RBP8.99□□□□□ -0.97
PRPF38A-201ENST00000257181 MYO18BQ8IUG5 2567 aa8.99□□□□□ -0.97
PRPF38A-201ENST00000257181 A0A087WSZ3 146 aa8.99□□□□□ -0.97
PRPF38A-201ENST00000257181 A0A087WYN8 130 aa8.98□□□□□ -0.97
PRPF38A-201ENST00000257181 CEP295Q9C0D2 2601 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms