RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 LINC00310P59036 64 aa13.63□□□□□ -0.23
NXT1-201ENST00000254998 GAGE2BQ13066 116 aa13.63□□□□□ -0.23
NXT1-201ENST00000254998 C6orf226Q5I0X4 101 aa13.63□□□□□ -0.23
NXT1-201ENST00000254998 C2orf82Q6UX34 121 aa13.63□□□□□ -0.23
NXT1-201ENST00000254998 TOMM7Q9P0U1 55 aa13.63□□□□□ -0.23
NXT1-201ENST00000254998 H3BRM9 83 aa13.62□□□□□ -0.23
NXT1-201ENST00000254998 KRTAP10-4P60372 401 aaPredicted RBP13.62□□□□□ -0.23
NXT1-201ENST00000254998 IFI27L1Q96BM0 104 aa13.62□□□□□ -0.23
NXT1-201ENST00000254998 INAFM2P0DMQ5 153 aa13.61□□□□□ -0.23
NXT1-201ENST00000254998 CKS1BP61024 79 aa13.61□□□□□ -0.23
NXT1-201ENST00000254998 RPL18AQ02543 176 aaKnown RBP13.61□□□□□ -0.23
NXT1-201ENST00000254998 FAM19A2Q8N3H0 131 aa13.61□□□□□ -0.23
NXT1-201ENST00000254998 TRAV12-1A0A0B4J245 112 aa13.6□□□□□ -0.23
NXT1-201ENST00000254998 CXCL5P42830 114 aa13.6□□□□□ -0.23
NXT1-201ENST00000254998 ZNF22P17026 224 aaPredicted RBP13.59□□□□□ -0.23
NXT1-201ENST00000254998 SPINK8P0C7L1 97 aa13.58□□□□□ -0.24
NXT1-201ENST00000254998 RPL37AP61513 92 aaKnown RBP13.58□□□□□ -0.24
NXT1-201ENST00000254998 COX7B2Q8TF08 81 aa13.58□□□□□ -0.24
NXT1-201ENST00000254998 IGLV5-39A0A0G2JS06 123 aa13.57□□□□□ -0.24
NXT1-201ENST00000254998 C11orf86A6NJI1 115 aa13.57□□□□□ -0.24
NXT1-201ENST00000254998 F8VRH5 84 aa13.57□□□□□ -0.24
NXT1-201ENST00000254998 Q6ZRP5 223 aa13.57□□□□□ -0.24
NXT1-201ENST00000254998 CHTOPQ9Y3Y2 248 aaKnown RBP13.57□□□□□ -0.24
NXT1-201ENST00000254998 FLG2Q5D862 2391 aaPredicted RBP13.56□□□□□ -0.24
NXT1-201ENST00000254998 NUPR1O60356 82 aa13.56□□□□□ -0.24
NXT1-201ENST00000254998 C7orf33Q8WU49 177 aa13.56□□□□□ -0.24
NXT1-201ENST00000254998 NDUFC2-KCTD14E9PQ53 114 aa13.55□□□□□ -0.24
NXT1-201ENST00000254998 HIST1H2BKO60814 126 aa13.54□□□□□ -0.24
NXT1-201ENST00000254998 LEPROTL1O95214 131 aa13.54□□□□□ -0.24
NXT1-201ENST00000254998 HIST1H2BJP06899 126 aa13.54□□□□□ -0.24
NXT1-201ENST00000254998 S100A1P23297 94 aa13.54□□□□□ -0.24
NXT1-201ENST00000254998 HIST1H2BOP23527 126 aa13.54□□□□□ -0.24
NXT1-201ENST00000254998 HIST1H2BBP33778 126 aa13.54□□□□□ -0.24
NXT1-201ENST00000254998 HIST1H2BDP58876 126 aa13.54□□□□□ -0.24
NXT1-201ENST00000254998 HIST1H2BCP62807 126 aa13.54□□□□□ -0.24
NXT1-201ENST00000254998 HIST2H2BEQ16778 126 aa13.54□□□□□ -0.24
NXT1-201ENST00000254998 C9orf116Q5BN46 136 aaPredicted RBP13.54□□□□□ -0.24
NXT1-201ENST00000254998 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.54□□□□□ -0.24
NXT1-201ENST00000254998 HIST1H2BHQ93079 126 aa13.54□□□□□ -0.24
NXT1-201ENST00000254998 HIST1H2BNQ99877 126 aa13.54□□□□□ -0.24
NXT1-201ENST00000254998 HIST1H2BMQ99879 126 aa13.54□□□□□ -0.24
NXT1-201ENST00000254998 A0A1W2PNN7 141 aa13.53□□□□□ -0.24
NXT1-201ENST00000254998 HSPB8Q9UJY1 196 aa13.52□□□□□ -0.25
NXT1-201ENST00000254998 GAGE2EQ4V326 116 aa13.51□□□□□ -0.25
NXT1-201ENST00000254998 TMEM170BQ5T4T1 132 aa13.51□□□□□ -0.25
NXT1-201ENST00000254998 GAGE2DQ9UEU5 116 aa13.51□□□□□ -0.25
NXT1-201ENST00000254998 ODF1Q14990 250 aa13.49□□□□□ -0.25
NXT1-201ENST00000254998 ATP6V1G1O75348 118 aa13.47□□□□□ -0.25
NXT1-201ENST00000254998 FABP4P15090 132 aa13.47□□□□□ -0.25
NXT1-201ENST00000254998 TMEM223A0PJW6 202 aa13.46□□□□□ -0.25
NXT1-201ENST00000254998 C9orf129Q5T035 196 aaKnown RBP13.46□□□□□ -0.25
NXT1-201ENST00000254998 PKHD1L1Q86WI1 4243 aa13.44□□□□□ -0.26
NXT1-201ENST00000254998 FAM168BA1KXE4 195 aa13.44□□□□□ -0.26
NXT1-201ENST00000254998 PRR3P79522 188 aaKnown RBP13.44□□□□□ -0.26
NXT1-201ENST00000254998 COA6Q5JTJ3 125 aaKnown RBP13.44□□□□□ -0.26
NXT1-201ENST00000254998 SFTA2Q6UW10 78 aa13.44□□□□□ -0.26
NXT1-201ENST00000254998 MYCBP2O75592 4640 aa13.43□□□□□ -0.26
NXT1-201ENST00000254998 H0Y8G0 127 aa13.43□□□□□ -0.26
NXT1-201ENST00000254998 KRTAP7-1Q8IUC3 87 aa13.43□□□□□ -0.26
NXT1-201ENST00000254998 HNRNPA3P51991 378 aaKnown RBP13.42□□□□□ -0.26
NXT1-201ENST00000254998 PLNP26678 52 aa13.41□□□□□ -0.26
NXT1-201ENST00000254998 PHF5AQ7RTV0 110 aaKnown RBP13.41□□□□□ -0.26
NXT1-201ENST00000254998 FAM19A5Q7Z5A7 132 aaPredicted RBP13.41□□□□□ -0.26
NXT1-201ENST00000254998 ZNF625Q96I27 306 aaPredicted RBP13.41□□□□□ -0.26
NXT1-201ENST00000254998 MAP1LC3CQ9BXW4 147 aa13.41□□□□□ -0.26
NXT1-201ENST00000254998 DMBT1Q9UGM3 2413 aaPredicted RBP13.4□□□□□ -0.26
NXT1-201ENST00000254998 XAGE1AQ9HD64 81 aa13.39□□□□□ -0.27
NXT1-201ENST00000254998 DPM2O94777 84 aa13.38□□□□□ -0.27
NXT1-201ENST00000254998 M0QXV9 152 aa13.37□□□□□ -0.27
NXT1-201ENST00000254998 COX17Q14061 63 aa13.37□□□□□ -0.27
NXT1-201ENST00000254998 ERG28Q9UKR5 140 aa13.37□□□□□ -0.27
NXT1-201ENST00000254998 SERTAD4-AS1Q5TG53 156 aa13.35□□□□□ -0.27
NXT1-201ENST00000254998 PSORS1C2Q9UIG4 136 aa13.35□□□□□ -0.27
NXT1-201ENST00000254998 PLA2G2DQ9UNK4 145 aa13.35□□□□□ -0.27
NXT1-201ENST00000254998 KRTAP29-1A8MX34 341 aaPredicted RBP13.34□□□□□ -0.27
NXT1-201ENST00000254998 SYS1-DBNDD2H3BUS1 97 aa13.34□□□□□ -0.27
NXT1-201ENST00000254998 IGKCP01834 107 aa13.34□□□□□ -0.27
NXT1-201ENST00000254998 PFN2P35080 140 aa13.34□□□□□ -0.27
NXT1-201ENST00000254998 TP73-AS1Q9UF72 201 aa13.34□□□□□ -0.27
NXT1-201ENST00000254998 PMCHL2Q9BQD1 86 aa13.33□□□□□ -0.28
NXT1-201ENST00000254998 OXTP01178 125 aa13.32□□□□□ -0.28
NXT1-201ENST00000254998 C22orf24Q9Y442 160 aa13.32□□□□□ -0.28
NXT1-201ENST00000254998 LEPROTO15243 131 aa13.31□□□□□ -0.28
NXT1-201ENST00000254998 KRTAP11-1Q8IUC1 163 aa13.31□□□□□ -0.28
NXT1-201ENST00000254998 PLEKHB2Q96CS7 222 aa13.31□□□□□ -0.28
NXT1-201ENST00000254998 IGLV5-37A0A075B6J1 123 aa13.3□□□□□ -0.28
NXT1-201ENST00000254998 HERVK_113P61574 105 aa13.3□□□□□ -0.28
NXT1-201ENST00000254998 HERV-K104P63124 156 aa13.3□□□□□ -0.28
NXT1-201ENST00000254998 LBHQ53QV2 105 aaPredicted RBP13.3□□□□□ -0.28
NXT1-201ENST00000254998 PET117Q6UWS5 81 aa13.3□□□□□ -0.28
NXT1-201ENST00000254998 SRSF9Q13242 221 aaKnown RBP eCLIP13.29□□□□□ -0.28
NXT1-201ENST00000254998 LINC01545Q5VT33 79 aa13.29□□□□□ -0.28
NXT1-201ENST00000254998 SND1-IT1Q9HBX3 110 aa13.29□□□□□ -0.28
NXT1-201ENST00000254998 NDUFA12Q9UI09 145 aa13.29□□□□□ -0.28
NXT1-201ENST00000254998 UBE2BP63146 152 aa13.28□□□□□ -0.28
NXT1-201ENST00000254998 SPINK6Q6UWN8 80 aa13.28□□□□□ -0.28
NXT1-201ENST00000254998 MYMXA0A1B0GTQ4 84 aa13.27□□□□□ -0.29
NXT1-201ENST00000254998 TSPEAR-AS2P59090 65 aa13.27□□□□□ -0.29
NXT1-201ENST00000254998 C1orf137Q5JT78 98 aa13.27□□□□□ -0.29
NXT1-201ENST00000254998 MRPL55Q7Z7F7 128 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms