RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 AKR1D1P51857 326 aa14.72□□□□□ -0.05
APOE-201ENST00000252486 LINC01620Q4KN68 170 aa14.72□□□□□ -0.05
APOE-201ENST00000252486 PMCHL2Q9BQD1 86 aa14.72□□□□□ -0.05
APOE-201ENST00000252486 PKHD1P08F94 4074 aa14.71□□□□□ -0.05
APOE-201ENST00000252486 TRBV30A0A0K0K1B3 111 aa14.7□□□□□ -0.06
APOE-201ENST00000252486 UNQ6190/PRO20217Q6UXQ8 127 aa14.7□□□□□ -0.06
APOE-201ENST00000252486 SDIM1Q6ZPB5 146 aa14.7□□□□□ -0.06
APOE-201ENST00000252486 HERVK_113P61574 105 aa14.69□□□□□ -0.06
APOE-201ENST00000252486 SFTA2Q6UW10 78 aa14.68□□□□□ -0.06
APOE-201ENST00000252486 C2orf82Q6UX34 121 aa14.68□□□□□ -0.06
APOE-201ENST00000252486 LOC107984640A0A0U1RRK4 108 aa14.67□□□□□ -0.06
APOE-201ENST00000252486 C10orf25Q5T742 122 aa14.67□□□□□ -0.06
APOE-201ENST00000252486 DYNC1H1Q14204 4646 aaKnown RBP14.67□□□□□ -0.06
APOE-201ENST00000252486 DNAH5Q8TE73 4624 aa14.67□□□□□ -0.06
APOE-201ENST00000252486 Q6ZSA8 131 aa14.66□□□□□ -0.06
APOE-201ENST00000252486 C6orf48Q9UBA6 75 aa14.66□□□□□ -0.06
APOE-201ENST00000252486 CDK2AP2O75956 126 aa14.63□□□□□ -0.07
APOE-201ENST00000252486 TLX1NBP0CAT3 122 aa14.63□□□□□ -0.07
APOE-201ENST00000252486 PLEKHB2Q96CS7 222 aa14.63□□□□□ -0.07
APOE-201ENST00000252486 LINC00474Q9P2X8 69 aa14.63□□□□□ -0.07
APOE-201ENST00000252486 BIRC6Q9NR09 4857 aa14.62□□□□□ -0.07
APOE-201ENST00000252486 TMA7Q9Y2S6 64 aaKnown RBP14.62□□□□□ -0.07
APOE-201ENST00000252486 LEPROTO15243 131 aa14.61□□□□□ -0.07
APOE-201ENST00000252486 CIRBPQ14011 172 aaKnown RBP14.6□□□□□ -0.07
APOE-201ENST00000252486 FAM30AQ9NZY2 134 aa14.6□□□□□ -0.07
APOE-201ENST00000252486 LRP1BQ9NZR2 4599 aa14.58□□□□□ -0.08
APOE-201ENST00000252486 E9PLD3 99 aa14.58□□□□□ -0.08
APOE-201ENST00000252486 NDUFC2-KCTD14E9PQ53 114 aa14.58□□□□□ -0.08
APOE-201ENST00000252486 RPL18AQ02543 176 aaKnown RBP14.58□□□□□ -0.08
APOE-201ENST00000252486 A0A096LNI7 61 aa14.57□□□□□ -0.08
APOE-201ENST00000252486 PTTG1IPP53801 180 aa14.57□□□□□ -0.08
APOE-201ENST00000252486 SPACA4Q8TDM5 124 aa14.57□□□□□ -0.08
APOE-201ENST00000252486 ZNF625Q96I27 306 aaPredicted RBP14.57□□□□□ -0.08
APOE-201ENST00000252486 IGKV2-24A0A0C4DH68 120 aa14.56□□□□□ -0.08
APOE-201ENST00000252486 J3QQQ9 107 aa14.56□□□□□ -0.08
APOE-201ENST00000252486 HERV-K104P63124 156 aa14.56□□□□□ -0.08
APOE-201ENST00000252486 GAGE2BQ13066 116 aa14.56□□□□□ -0.08
APOE-201ENST00000252486 C9orf116Q5BN46 136 aaPredicted RBP14.56□□□□□ -0.08
APOE-201ENST00000252486 DPH3Q96FX2 82 aa14.56□□□□□ -0.08
APOE-201ENST00000252486 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.56□□□□□ -0.08
APOE-201ENST00000252486 CHTF8P0CG12 524 aa14.55□□□□□ -0.08
APOE-201ENST00000252486 NDUFA12Q9UI09 145 aa14.55□□□□□ -0.08
APOE-201ENST00000252486 MYMXA0A1B0GTQ4 84 aa14.54□□□□□ -0.08
APOE-201ENST00000252486 LGALS3P17931 250 aaKnown RBP14.54□□□□□ -0.08
APOE-201ENST00000252486 NMUP48645 174 aa14.54□□□□□ -0.08
APOE-201ENST00000252486 XGP55808 180 aa14.54□□□□□ -0.08
APOE-201ENST00000252486 MAJINQ3KP22 176 aa14.54□□□□□ -0.08
APOE-201ENST00000252486 Q6ZRP5 223 aa14.54□□□□□ -0.08
APOE-201ENST00000252486 COX17Q14061 63 aa14.53□□□□□ -0.08
APOE-201ENST00000252486 STPG4Q8N801 248 aa14.53□□□□□ -0.08
APOE-201ENST00000252486 LINC00587B1AMM8 73 aa14.52□□□□□ -0.09
APOE-201ENST00000252486 PANO1I0J062 215 aa14.52□□□□□ -0.09
APOE-201ENST00000252486 ERG28Q9UKR5 140 aa14.52□□□□□ -0.09
APOE-201ENST00000252486 TSPEAR-AS2P59090 65 aa14.51□□□□□ -0.09
APOE-201ENST00000252486 SCXQ7RTU7 201 aa14.51□□□□□ -0.09
APOE-201ENST00000252486 ATOH7Q8N100 152 aa14.51□□□□□ -0.09
APOE-201ENST00000252486 SCGB1D1O95968 90 aa14.5□□□□□ -0.09
APOE-201ENST00000252486 GAGE2EQ4V326 116 aa14.5□□□□□ -0.09
APOE-201ENST00000252486 CIRBP-AS1Q8TBR5 109 aa14.5□□□□□ -0.09
APOE-201ENST00000252486 GAGE2DQ9UEU5 116 aa14.5□□□□□ -0.09
APOE-201ENST00000252486 DNAH8Q96JB1 4490 aa14.49□□□□□ -0.09
APOE-201ENST00000252486 PLAC8Q9NZF1 115 aa14.49□□□□□ -0.09
APOE-201ENST00000252486 A0A087WYN8 130 aa14.48□□□□□ -0.09
APOE-201ENST00000252486 HSBP1L1C9JCN9 74 aa14.47□□□□□ -0.09
APOE-201ENST00000252486 PFN2P35080 140 aa14.47□□□□□ -0.09
APOE-201ENST00000252486 HAMPP81172 84 aa14.46□□□□□ -0.09
APOE-201ENST00000252486 MEIG1Q5JSS6 88 aa14.46□□□□□ -0.09
APOE-201ENST00000252486 LINC00158P58513 81 aa14.44□□□□□ -0.1
APOE-201ENST00000252486 IGKV2D-26A0A0A0MRZ7 120 aa14.43□□□□□ -0.1
APOE-201ENST00000252486 ANKRD39Q53RE8 183 aa14.43□□□□□ -0.1
APOE-201ENST00000252486 APOBP04114 4563 aaKnown RBP14.42□□□□□ -0.1
APOE-201ENST00000252486 JOSD1Q15040 202 aaPredicted RBP14.42□□□□□ -0.1
APOE-201ENST00000252486 EPM2AB3EWF7 344 aa14.41□□□□□ -0.1
APOE-201ENST00000252486 C9orf129Q5T035 196 aaKnown RBP14.41□□□□□ -0.1
APOE-201ENST00000252486 XAGE1AQ9HD64 81 aa14.41□□□□□ -0.1
APOE-201ENST00000252486 ZNF815PA8K554 130 aa14.4□□□□□ -0.1
APOE-201ENST00000252486 SMIM13P0DJ93 91 aa14.4□□□□□ -0.1
APOE-201ENST00000252486 A0A1W2PNN7 141 aa14.39□□□□□ -0.11
APOE-201ENST00000252486 SND1-IT1Q9HBX3 110 aa14.39□□□□□ -0.11
APOE-201ENST00000252486 A0A0J9YXY3 114 aa14.37□□□□□ -0.11
APOE-201ENST00000252486 A0A0U1RRA0 63 aa14.37□□□□□ -0.11
APOE-201ENST00000252486 PLA2G2DQ9UNK4 145 aa14.37□□□□□ -0.11
APOE-201ENST00000252486 KIAA1109Q2LD37 5005 aa14.37□□□□□ -0.11
APOE-201ENST00000252486 TIMM17BO60830 172 aa14.35□□□□□ -0.11
APOE-201ENST00000252486 SMR3BP02814 79 aaPredicted RBP14.35□□□□□ -0.11
APOE-201ENST00000252486 FAM19A5Q7Z5A7 132 aaPredicted RBP14.35□□□□□ -0.11
APOE-201ENST00000252486 MIR7-3HGQ8N6C7 128 aa14.35□□□□□ -0.11
APOE-201ENST00000252486 C7orf33Q8WU49 177 aa14.35□□□□□ -0.11
APOE-201ENST00000252486 RYR1P21817 5038 aa14.34□□□□□ -0.11
APOE-201ENST00000252486 FAM168BA1KXE4 195 aa14.34□□□□□ -0.11
APOE-201ENST00000252486 FAM229AH3BQW9 127 aa14.34□□□□□ -0.11
APOE-201ENST00000252486 TTTY13Q9BZ97 58 aa14.34□□□□□ -0.11
APOE-201ENST00000252486 Q8N1X5 172 aa14.33□□□□□ -0.12
APOE-201ENST00000252486 LINC00528Q8N1L1 170 aa14.32□□□□□ -0.12
APOE-201ENST00000252486 M0QXV9 152 aa14.31□□□□□ -0.12
APOE-201ENST00000252486 RPL24P83731 157 aaKnown RBP14.31□□□□□ -0.12
APOE-201ENST00000252486 SCGB1D4Q6XE38 83 aa14.31□□□□□ -0.12
APOE-201ENST00000252486 PCP2Q8IVA1 136 aa14.31□□□□□ -0.12
APOE-201ENST00000252486 VAMP8Q9BV40 100 aa14.31□□□□□ -0.12
APOE-201ENST00000252486 HSPG2P98160 4391 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms