RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 NANOS2P60321 138 aaKnown RBP8.29□□□□□ -1.08
NOD1-201ENST00000222823 COX17Q14061 63 aa8.28□□□□□ -1.08
NOD1-201ENST00000222823 WDFY4Q6ZS81 3184 aa8.28□□□□□ -1.08
NOD1-201ENST00000222823 SMIM1B2RUZ4 78 aa8.28□□□□□ -1.08
NOD1-201ENST00000222823 A0A0J9YWU9 116 aa8.28□□□□□ -1.08
NOD1-201ENST00000222823 IGKV4-1P06312 121 aa8.28□□□□□ -1.08
NOD1-201ENST00000222823 USP34Q70CQ2 3546 aa8.27□□□□□ -1.09
NOD1-201ENST00000222823 UNQ6190/PRO20217Q6UXQ8 127 aa8.27□□□□□ -1.09
NOD1-201ENST00000222823 MUC7Q8TAX7 377 aa8.27□□□□□ -1.09
NOD1-201ENST00000222823 C3orf84H3BNL1 204 aa8.27□□□□□ -1.09
NOD1-201ENST00000222823 KLK9Q2XQG4 91 aa8.27□□□□□ -1.09
NOD1-201ENST00000222823 CHCHD7Q9BUK0 85 aa8.27□□□□□ -1.09
NOD1-201ENST00000222823 LINC00694P0DN24 101 aa8.27□□□□□ -1.09
NOD1-201ENST00000222823 ZNF73O43830 326 aaPredicted RBP8.26□□□□□ -1.09
NOD1-201ENST00000222823 IGLV4-60A0A075B6I1 120 aa8.26□□□□□ -1.09
NOD1-201ENST00000222823 REV3LO60673 3130 aa8.26□□□□□ -1.09
NOD1-201ENST00000222823 M0R2N4 97 aa8.26□□□□□ -1.09
NOD1-201ENST00000222823 DHRS4-AS1Q9P1J3 65 aa8.25□□□□□ -1.09
NOD1-201ENST00000222823 PPDPFQ9H3Y8 114 aa8.25□□□□□ -1.09
NOD1-201ENST00000222823 CSDC2Q9Y534 153 aaKnown RBP8.25□□□□□ -1.09
NOD1-201ENST00000222823 FHL2Q14192 279 aa8.24□□□□□ -1.09
NOD1-201ENST00000222823 BEAN1Q3B7T3 259 aa8.24□□□□□ -1.09
NOD1-201ENST00000222823 RPL37AP8A6NKH3 93 aa8.24□□□□□ -1.09
NOD1-201ENST00000222823 LOC107984640A0A0U1RRK4 108 aa8.24□□□□□ -1.09
NOD1-201ENST00000222823 TSPEAR-AS2P59090 65 aa8.24□□□□□ -1.09
NOD1-201ENST00000222823 AMELXQ99217 191 aa8.24□□□□□ -1.09
NOD1-201ENST00000222823 COX6A2Q02221 97 aa8.23□□□□□ -1.09
NOD1-201ENST00000222823 IMUPQ9GZP8 106 aa8.23□□□□□ -1.09
NOD1-201ENST00000222823 C16orf95Q9H693 158 aa8.23□□□□□ -1.09
NOD1-201ENST00000222823 RETNQ9HD89 108 aa8.23□□□□□ -1.09
NOD1-201ENST00000222823 EGFEM1PQ0D2K5 195 aa8.23□□□□□ -1.09
NOD1-201ENST00000222823 C9orf116Q5BN46 136 aaPredicted RBP8.23□□□□□ -1.09
NOD1-201ENST00000222823 C7orf33Q8WU49 177 aa8.23□□□□□ -1.09
NOD1-201ENST00000222823 USP17L23D6RBM5 183 aa8.22□□□□□ -1.09
NOD1-201ENST00000222823 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.22□□□□□ -1.09
NOD1-201ENST00000222823 MGAM2Q2M2H8 2515 aa8.22□□□□□ -1.09
NOD1-201ENST00000222823 Q6ZSN1 163 aa8.21□□□□□ -1.09
NOD1-201ENST00000222823 Q6ZTC4 211 aa8.21□□□□□ -1.09
NOD1-201ENST00000222823 XGP55808 180 aa8.21□□□□□ -1.1
NOD1-201ENST00000222823 WFDC10BQ8IUB3 73 aa8.21□□□□□ -1.1
NOD1-201ENST00000222823 C3orf22Q8N5N4 141 aa8.2□□□□□ -1.1
NOD1-201ENST00000222823 FRYLO94915 3013 aa8.2□□□□□ -1.1
NOD1-201ENST00000222823 ADAMTSL4-AS1Q5T5F5 129 aa8.2□□□□□ -1.1
NOD1-201ENST00000222823 NTM-AS1Q6ZSK4 140 aa8.2□□□□□ -1.1
NOD1-201ENST00000222823 NDUFC2O95298 119 aa8.19□□□□□ -1.1
NOD1-201ENST00000222823 FAM19A4Q96LR4 140 aa8.19□□□□□ -1.1
NOD1-201ENST00000222823 RPL28P46779 137 aaKnown RBP8.19□□□□□ -1.1
NOD1-201ENST00000222823 KIF25-AS1Q9Y6Z4 181 aa8.19□□□□□ -1.1
NOD1-201ENST00000222823 SPINK6Q6UWN8 80 aa8.19□□□□□ -1.1
NOD1-201ENST00000222823 SERP2Q8N6R1 65 aa8.19□□□□□ -1.1
NOD1-201ENST00000222823 FAM236DA0A1B0GTK5 79 aa8.19□□□□□ -1.1
NOD1-201ENST00000222823 FAM236CP0DP71 79 aa8.19□□□□□ -1.1
NOD1-201ENST00000222823 HECTD1Q9ULT8 2610 aa8.18□□□□□ -1.1
NOD1-201ENST00000222823 TRBV10-3A0A0K0K1G6 114 aa8.18□□□□□ -1.1
NOD1-201ENST00000222823 PRR3P79522 188 aaKnown RBP8.18□□□□□ -1.1
NOD1-201ENST00000222823 FAM19A3Q7Z5A8 133 aa8.18□□□□□ -1.1
NOD1-201ENST00000222823 LY6G6CO95867 125 aa8.18□□□□□ -1.1
NOD1-201ENST00000222823 SPTBN5Q9NRC6 3674 aaKnown RBP8.17□□□□□ -1.1
NOD1-201ENST00000222823 ATRQ13535 2644 aa8.17□□□□□ -1.1
NOD1-201ENST00000222823 NBEAQ8NFP9 2946 aa8.17□□□□□ -1.1
NOD1-201ENST00000222823 WFDC13Q8IUB5 93 aa8.17□□□□□ -1.1
NOD1-201ENST00000222823 A0A1B0GUV1 79 aa8.17□□□□□ -1.1
NOD1-201ENST00000222823 MAST4O15021 2626 aa8.17□□□□□ -1.1
NOD1-201ENST00000222823 LINC00474Q9P2X8 69 aa8.16□□□□□ -1.1
NOD1-201ENST00000222823 ZNF292O60281 2723 aa8.16□□□□□ -1.1
NOD1-201ENST00000222823 ZNF706Q9Y5V0 76 aaPredicted RBP8.16□□□□□ -1.1
NOD1-201ENST00000222823 CASC2Q6XLA1 102 aa8.15□□□□□ -1.1
NOD1-201ENST00000222823 C6orf223Q8N319 242 aa8.15□□□□□ -1.1
NOD1-201ENST00000222823 LINC00315P59091 139 aa8.15□□□□□ -1.1
NOD1-201ENST00000222823 Q8N814 137 aa8.15□□□□□ -1.1
NOD1-201ENST00000222823 FAM240AA0A1B0GVK7 77 aa8.15□□□□□ -1.1
NOD1-201ENST00000222823 PLAC8L1A1L4L8 177 aa8.15□□□□□ -1.1
NOD1-201ENST00000222823 SEC61GP60059 68 aa8.15□□□□□ -1.1
NOD1-201ENST00000222823 MGAQ8IWI9 3026 aa8.14□□□□□ -1.11
NOD1-201ENST00000222823 FRYQ5TBA9 3013 aa8.14□□□□□ -1.11
NOD1-201ENST00000222823 M0QXV9 152 aa8.14□□□□□ -1.11
NOD1-201ENST00000222823 Q6JHZ5 121 aa8.13□□□□□ -1.11
NOD1-201ENST00000222823 HRCT1Q6UXD1 115 aa8.13□□□□□ -1.11
NOD1-201ENST00000222823 BRK1Q8WUW1 75 aa8.13□□□□□ -1.11
NOD1-201ENST00000222823 IGLV9-49A0A0B4J1Y8 123 aa8.13□□□□□ -1.11
NOD1-201ENST00000222823 MPLKIPQ8TAP9 179 aa8.13□□□□□ -1.11
NOD1-201ENST00000222823 SNURFQ9Y675 71 aa8.13□□□□□ -1.11
NOD1-201ENST00000222823 DSPP15924 2871 aaKnown RBP8.12□□□□□ -1.11
NOD1-201ENST00000222823 NDUFC2-KCTD14E9PQ53 114 aa8.12□□□□□ -1.11
NOD1-201ENST00000222823 COX7CP15954 63 aa8.12□□□□□ -1.11
NOD1-201ENST00000222823 Q8N2B8 174 aa8.12□□□□□ -1.11
NOD1-201ENST00000222823 C11orf72Q8NBR9 251 aa8.12□□□□□ -1.11
NOD1-201ENST00000222823 LYPD5Q6UWN5 251 aa8.12□□□□□ -1.11
NOD1-201ENST00000222823 NDUFC1O43677 76 aa8.12□□□□□ -1.11
NOD1-201ENST00000222823 A0A087WYN8 130 aa8.11□□□□□ -1.11
NOD1-201ENST00000222823 NUPR2A6NF83 97 aa8.11□□□□□ -1.11
NOD1-201ENST00000222823 C1orf137Q5JT78 98 aa8.11□□□□□ -1.11
NOD1-201ENST00000222823 FREM2Q5SZK8 3169 aa8.1□□□□□ -1.11
NOD1-201ENST00000222823 Q6Q795 121 aa8.09□□□□□ -1.11
NOD1-201ENST00000222823 CCDC179H3BU77 68 aa8.09□□□□□ -1.12
NOD1-201ENST00000222823 PRR4Q16378 134 aa8.09□□□□□ -1.12
NOD1-201ENST00000222823 C2orf48Q96LS8 159 aa8.08□□□□□ -1.12
NOD1-201ENST00000222823 IGHV3OR16-9A0A0B4J2B5 98 aa8.07□□□□□ -1.12
NOD1-201ENST00000222823 C10orf25Q5T742 122 aa8.07□□□□□ -1.12
NOD1-201ENST00000222823 REG3GQ6UW15 175 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms