RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 Q8IZM0 81 aa8.84□□□□□ -0.99
UPK1A-201ENST00000222275 LRP1Q07954 4544 aaKnown RBP8.84□□□□□ -0.99
UPK1A-201ENST00000222275 DMBT1Q9UGM3 2413 aaPredicted RBP8.83□□□□□ -1
UPK1A-201ENST00000222275 C11orf86A6NJI1 115 aa8.83□□□□□ -1
UPK1A-201ENST00000222275 SYS1-DBNDD2H3BUS1 97 aa8.83□□□□□ -1
UPK1A-201ENST00000222275 ZNF22P17026 224 aaPredicted RBP8.83□□□□□ -1
UPK1A-201ENST00000222275 CXCL5P42830 114 aa8.83□□□□□ -1
UPK1A-201ENST00000222275 CKS1BP61024 79 aa8.83□□□□□ -1
UPK1A-201ENST00000222275 LINC01620Q4KN68 170 aa8.83□□□□□ -1
UPK1A-201ENST00000222275 CARD19Q96LW7 228 aa8.83□□□□□ -1
UPK1A-201ENST00000222275 C20orf202A1L168 122 aa8.82□□□□□ -1
UPK1A-201ENST00000222275 SMIM1B2RUZ4 78 aa8.82□□□□□ -1
UPK1A-201ENST00000222275 EPM2AB3EWF7 344 aa8.82□□□□□ -1
UPK1A-201ENST00000222275 DPM2O94777 84 aa8.82□□□□□ -1
UPK1A-201ENST00000222275 RNF151Q2KHN1 245 aa8.82□□□□□ -1
UPK1A-201ENST00000222275 TOMM7Q9P0U1 55 aa8.82□□□□□ -1
UPK1A-201ENST00000222275 KIAA0087Q14695 138 aa8.81□□□□□ -1
UPK1A-201ENST00000222275 SFTA2Q6UW10 78 aa8.81□□□□□ -1
UPK1A-201ENST00000222275 HIST3H2BBQ8N257 126 aa8.81□□□□□ -1
UPK1A-201ENST00000222275 COX7B2Q8TF08 81 aa8.81□□□□□ -1
UPK1A-201ENST00000222275 IGKCP01834 107 aa8.8□□□□□ -1
UPK1A-201ENST00000222275 SLPIP03973 132 aa8.8□□□□□ -1
UPK1A-201ENST00000222275 SPINK8P0C7L1 97 aa8.8□□□□□ -1
UPK1A-201ENST00000222275 LINC00526Q96FQ7 95 aa8.8□□□□□ -1
UPK1A-201ENST00000222275 FAT3Q8TDW7 4589 aa8.8□□□□□ -1
UPK1A-201ENST00000222275 IGLV5-39A0A0G2JS06 123 aa8.79□□□□□ -1
UPK1A-201ENST00000222275 TRBV30A0A0K0K1B3 111 aa8.79□□□□□ -1
UPK1A-201ENST00000222275 C3orf79P0CE67 100 aa8.79□□□□□ -1
UPK1A-201ENST00000222275 KRTDAPP60985 99 aa8.79□□□□□ -1
UPK1A-201ENST00000222275 HERVK_113P61574 105 aa8.79□□□□□ -1
UPK1A-201ENST00000222275 SNRPEP62304 92 aaKnown RBP8.79□□□□□ -1
UPK1A-201ENST00000222275 Q5VSD8 79 aa8.79□□□□□ -1
UPK1A-201ENST00000222275 PKHD1L1Q86WI1 4243 aa8.79□□□□□ -1
UPK1A-201ENST00000222275 TMEM223A0PJW6 202 aa8.78□□□□□ -1
UPK1A-201ENST00000222275 C5orf52A6NGY3 159 aa8.78□□□□□ -1
UPK1A-201ENST00000222275 LINC01545Q5VT33 79 aa8.78□□□□□ -1
UPK1A-201ENST00000222275 Q6ZRU5 148 aa8.78□□□□□ -1
UPK1A-201ENST00000222275 HIST1H2BLQ99880 126 aa8.78□□□□□ -1
UPK1A-201ENST00000222275 LOC107984640A0A0U1RRK4 108 aa8.77□□□□□ -1.01
UPK1A-201ENST00000222275 SDIM1Q6ZPB5 146 aa8.77□□□□□ -1.01
UPK1A-201ENST00000222275 Q6ZSA8 131 aa8.77□□□□□ -1.01
UPK1A-201ENST00000222275 LINC00474Q9P2X8 69 aa8.77□□□□□ -1.01
UPK1A-201ENST00000222275 INAFM2P0DMQ5 153 aa8.76□□□□□ -1.01
UPK1A-201ENST00000222275 UNQ6190/PRO20217Q6UXQ8 127 aa8.76□□□□□ -1.01
UPK1A-201ENST00000222275 PLEKHB2Q96CS7 222 aa8.75□□□□□ -1.01
UPK1A-201ENST00000222275 PMCHL2Q9BQD1 86 aa8.75□□□□□ -1.01
UPK1A-201ENST00000222275 TLX1NBP0CAT3 122 aa8.74□□□□□ -1.01
UPK1A-201ENST00000222275 C2orf82Q6UX34 121 aa8.74□□□□□ -1.01
UPK1A-201ENST00000222275 C6orf48Q9UBA6 75 aa8.74□□□□□ -1.01
UPK1A-201ENST00000222275 LEPROTO15243 131 aa8.72□□□□□ -1.01
UPK1A-201ENST00000222275 C10orf25Q5T742 122 aa8.72□□□□□ -1.01
UPK1A-201ENST00000222275 DPH3Q96FX2 82 aa8.72□□□□□ -1.01
UPK1A-201ENST00000222275 LINC00587B1AMM8 73 aa8.71□□□□□ -1.02
UPK1A-201ENST00000222275 NDUFC2-KCTD14E9PQ53 114 aa8.71□□□□□ -1.02
UPK1A-201ENST00000222275 NMUP48645 174 aa8.71□□□□□ -1.02
UPK1A-201ENST00000222275 HERV-K104P63124 156 aa8.71□□□□□ -1.02
UPK1A-201ENST00000222275 CIRBPQ14011 172 aaKnown RBP8.71□□□□□ -1.02
UPK1A-201ENST00000222275 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
UPK1A-201ENST00000222275 E9PLD3 99 aa8.7□□□□□ -1.02
UPK1A-201ENST00000222275 LGALS3P17931 250 aaKnown RBP8.7□□□□□ -1.02
UPK1A-201ENST00000222275 PTTG1IPP53801 180 aa8.7□□□□□ -1.02
UPK1A-201ENST00000222275 RPL18AQ02543 176 aaKnown RBP8.7□□□□□ -1.02
UPK1A-201ENST00000222275 GAGE2BQ13066 116 aa8.7□□□□□ -1.02
UPK1A-201ENST00000222275 COX17Q14061 63 aa8.7□□□□□ -1.02
UPK1A-201ENST00000222275 IGKV2-24A0A0C4DH68 120 aa8.69□□□□□ -1.02
UPK1A-201ENST00000222275 J3QQQ9 107 aa8.69□□□□□ -1.02
UPK1A-201ENST00000222275 KRTAP10-4P60372 401 aaPredicted RBP8.69□□□□□ -1.02
UPK1A-201ENST00000222275 SCXQ7RTU7 201 aa8.69□□□□□ -1.02
UPK1A-201ENST00000222275 A0A096LNI7 61 aa8.68□□□□□ -1.02
UPK1A-201ENST00000222275 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
UPK1A-201ENST00000222275 MAJINQ3KP22 176 aa8.68□□□□□ -1.02
UPK1A-201ENST00000222275 SPACA4Q8TDM5 124 aa8.68□□□□□ -1.02
UPK1A-201ENST00000222275 ZNF625Q96I27 306 aaPredicted RBP8.68□□□□□ -1.02
UPK1A-201ENST00000222275 NDUFA12Q9UI09 145 aa8.68□□□□□ -1.02
UPK1A-201ENST00000222275 TMA7Q9Y2S6 64 aaKnown RBP8.68□□□□□ -1.02
UPK1A-201ENST00000222275 HSBP1L1C9JCN9 74 aa8.67□□□□□ -1.02
UPK1A-201ENST00000222275 CIRBP-AS1Q8TBR5 109 aa8.67□□□□□ -1.02
UPK1A-201ENST00000222275 ERG28Q9UKR5 140 aa8.67□□□□□ -1.02
UPK1A-201ENST00000222275 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.67□□□□□ -1.02
UPK1A-201ENST00000222275 PANO1I0J062 215 aa8.66□□□□□ -1.02
UPK1A-201ENST00000222275 SCGB1D1O95968 90 aa8.66□□□□□ -1.02
UPK1A-201ENST00000222275 GAGE2EQ4V326 116 aa8.66□□□□□ -1.02
UPK1A-201ENST00000222275 C9orf116Q5BN46 136 aaPredicted RBP8.66□□□□□ -1.02
UPK1A-201ENST00000222275 Q6ZRP5 223 aa8.66□□□□□ -1.02
UPK1A-201ENST00000222275 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
UPK1A-201ENST00000222275 STPG4Q8N801 248 aa8.66□□□□□ -1.02
UPK1A-201ENST00000222275 GAGE2DQ9UEU5 116 aa8.66□□□□□ -1.02
UPK1A-201ENST00000222275 CHTF8P0CG12 524 aa8.65□□□□□ -1.02
UPK1A-201ENST00000222275 A0A087WYN8 130 aa8.64□□□□□ -1.03
UPK1A-201ENST00000222275 PFN2P35080 140 aa8.64□□□□□ -1.03
UPK1A-201ENST00000222275 MEIG1Q5JSS6 88 aa8.64□□□□□ -1.03
UPK1A-201ENST00000222275 PLAC8Q9NZF1 115 aa8.64□□□□□ -1.03
UPK1A-201ENST00000222275 LINC00158P58513 81 aa8.63□□□□□ -1.03
UPK1A-201ENST00000222275 ATOH7Q8N100 152 aa8.63□□□□□ -1.03
UPK1A-201ENST00000222275 TSPEAR-AS2P59090 65 aa8.62□□□□□ -1.03
UPK1A-201ENST00000222275 HMCN2Q8NDA2 5059 aa8.6□□□□□ -1.03
UPK1A-201ENST00000222275 JOSD1Q15040 202 aaPredicted RBP8.6□□□□□ -1.03
UPK1A-201ENST00000222275 C7orf33Q8WU49 177 aa8.6□□□□□ -1.03
UPK1A-201ENST00000222275 ZNF815PA8K554 130 aa8.59□□□□□ -1.03
UPK1A-201ENST00000222275 SMIM13P0DJ93 91 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms