RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 ANKRD39Q53RE8 183 aa9.53□□□□□ -0.88
UPK3A-201ENST00000216211 UBE2D4Q9Y2X8 147 aa9.53□□□□□ -0.88
UPK3A-201ENST00000216211 HIGD2BQ4VC39 106 aa9.52□□□□□ -0.89
UPK3A-201ENST00000216211 AMMECR1LQ6DCA0 310 aa9.52□□□□□ -0.89
UPK3A-201ENST00000216211 STPG4Q8N801 248 aa9.52□□□□□ -0.89
UPK3A-201ENST00000216211 SPACA4Q8TDM5 124 aa9.52□□□□□ -0.89
UPK3A-201ENST00000216211 FAM104AQ969W3 186 aa9.52□□□□□ -0.89
UPK3A-201ENST00000216211 C14orf144Q96I85 54 aa9.52□□□□□ -0.89
UPK3A-201ENST00000216211 AMELXQ99217 191 aa9.52□□□□□ -0.89
UPK3A-201ENST00000216211 PLA2G2DQ9UNK4 145 aa9.52□□□□□ -0.89
UPK3A-201ENST00000216211 COX8AP10176 69 aa9.51□□□□□ -0.89
UPK3A-201ENST00000216211 MRPS36P82909 103 aaKnown RBP9.51□□□□□ -0.89
UPK3A-201ENST00000216211 SMAGPQ0VAQ4 97 aa9.51□□□□□ -0.89
UPK3A-201ENST00000216211 CFAP161Q6P656 301 aa9.51□□□□□ -0.89
UPK3A-201ENST00000216211 CHCHD10Q8WYQ3 142 aaPredicted RBP9.51□□□□□ -0.89
UPK3A-201ENST00000216211 OPRPNQ99935 248 aaPredicted RBP9.51□□□□□ -0.89
UPK3A-201ENST00000216211 VCX2Q9H322 139 aa9.51□□□□□ -0.89
UPK3A-201ENST00000216211 IGLV4-69A0A075B6H9 119 aa9.5□□□□□ -0.89
UPK3A-201ENST00000216211 H7C423 109 aa9.5□□□□□ -0.89
UPK3A-201ENST00000216211 ZC2HC1BQ5TFG8 222 aa9.5□□□□□ -0.89
UPK3A-201ENST00000216211 MRPL52Q86TS9 123 aaKnown RBP9.5□□□□□ -0.89
UPK3A-201ENST00000216211 CSDC2Q9Y534 153 aaKnown RBP9.5□□□□□ -0.89
UPK3A-201ENST00000216211 FGF6P10767 208 aa9.49□□□□□ -0.89
UPK3A-201ENST00000216211 COX6A2Q02221 97 aa9.49□□□□□ -0.89
UPK3A-201ENST00000216211 SLC25A34Q6PIV7 304 aa9.49□□□□□ -0.89
UPK3A-201ENST00000216211 Q6ZRU5 148 aa9.49□□□□□ -0.89
UPK3A-201ENST00000216211 TNXBP22105 4242 aa9.49□□□□□ -0.89
UPK3A-201ENST00000216211 DLEU1O43261 78 aa9.48□□□□□ -0.89
UPK3A-201ENST00000216211 MT1HL1P0DM35 61 aa9.48□□□□□ -0.89
UPK3A-201ENST00000216211 PLAC8Q9NZF1 115 aa9.48□□□□□ -0.89
UPK3A-201ENST00000216211 IGKV2-24A0A0C4DH68 120 aa9.47□□□□□ -0.89
UPK3A-201ENST00000216211 C11orf86A6NJI1 115 aa9.47□□□□□ -0.89
UPK3A-201ENST00000216211 FOXI1Q12951 378 aa9.46□□□□□ -0.9
UPK3A-201ENST00000216211 BOD1L2Q8IYS8 172 aa9.46□□□□□ -0.9
UPK3A-201ENST00000216211 OR5A1Q8NGJ0 315 aa9.46□□□□□ -0.9
UPK3A-201ENST00000216211 GVQW2A0A096LPI5 108 aaPredicted RBP9.45□□□□□ -0.9
UPK3A-201ENST00000216211 IGKV2D-26A0A0A0MRZ7 120 aa9.45□□□□□ -0.9
UPK3A-201ENST00000216211 ZNF25P17030 456 aaPredicted RBP9.45□□□□□ -0.9
UPK3A-201ENST00000216211 Q6ZUT4 128 aa9.45□□□□□ -0.9
UPK3A-201ENST00000216211 C7orf33Q8WU49 177 aa9.45□□□□□ -0.9
UPK3A-201ENST00000216211 TMEM101Q96IK0 257 aa9.45□□□□□ -0.9
UPK3A-201ENST00000216211 E9PLD3 99 aa9.44□□□□□ -0.9
UPK3A-201ENST00000216211 CCL25O15444 150 aa9.44□□□□□ -0.9
UPK3A-201ENST00000216211 XCL1P47992 114 aa9.44□□□□□ -0.9
UPK3A-201ENST00000216211 CTAG1AP78358 180 aa9.44□□□□□ -0.9
UPK3A-201ENST00000216211 C2orf88Q9BSF0 95 aa9.44□□□□□ -0.9
UPK3A-201ENST00000216211 A0A096LNI7 61 aa9.43□□□□□ -0.9
UPK3A-201ENST00000216211 A0A0J9YXV3 536 aa9.43□□□□□ -0.9
UPK3A-201ENST00000216211 LINC00959A0A1B0GUT2 108 aa9.43□□□□□ -0.9
UPK3A-201ENST00000216211 TINCRA0A1B0GVN0 87 aa9.43□□□□□ -0.9
UPK3A-201ENST00000216211 NMUP48645 174 aa9.43□□□□□ -0.9
UPK3A-201ENST00000216211 HERVK_113P61574 105 aa9.43□□□□□ -0.9
UPK3A-201ENST00000216211 FAM19A3Q7Z5A8 133 aa9.43□□□□□ -0.9
UPK3A-201ENST00000216211 PCP2Q8IVA1 136 aa9.43□□□□□ -0.9
UPK3A-201ENST00000216211 LINC00526Q96FQ7 95 aa9.43□□□□□ -0.9
UPK3A-201ENST00000216211 CDC42SE2Q9NRR3 84 aa9.43□□□□□ -0.9
UPK3A-201ENST00000216211 M0R143 59 aa9.42□□□□□ -0.9
UPK3A-201ENST00000216211 ZNF22P17026 224 aaPredicted RBP9.42□□□□□ -0.9
UPK3A-201ENST00000216211 UBE2D1P51668 147 aa9.42□□□□□ -0.9
UPK3A-201ENST00000216211 IGHV1-58A0A0C4DH39 117 aa9.41□□□□□ -0.9
UPK3A-201ENST00000216211 RNASE13Q5GAN3 156 aaKnown RBP9.41□□□□□ -0.9
UPK3A-201ENST00000216211 TMEM170BQ5T4T1 132 aa9.41□□□□□ -0.9
UPK3A-201ENST00000216211 C2orf91Q6ZV80 131 aa9.41□□□□□ -0.9
UPK3A-201ENST00000216211 TP73-AS1Q9UF72 201 aa9.41□□□□□ -0.9
UPK3A-201ENST00000216211 TMEM223A0PJW6 202 aa9.4□□□□□ -0.9
UPK3A-201ENST00000216211 SS18Q15532 418 aa9.4□□□□□ -0.9
UPK3A-201ENST00000216211 LBHQ53QV2 105 aaPredicted RBP9.4□□□□□ -0.9
UPK3A-201ENST00000216211 SNHG12Q9BXW3 62 aa9.4□□□□□ -0.9
UPK3A-201ENST00000216211 SEC11AP67812 179 aa9.39□□□□□ -0.91
UPK3A-201ENST00000216211 PRR3P79522 188 aaKnown RBP9.39□□□□□ -0.91
UPK3A-201ENST00000216211 CARD19Q96LW7 228 aa9.39□□□□□ -0.91
UPK3A-201ENST00000216211 HIGD1BQ9P298 99 aa9.39□□□□□ -0.91
UPK3A-201ENST00000216211 IGLV5-45A0A087WSX0 123 aa9.38□□□□□ -0.91
UPK3A-201ENST00000216211 LEPROTO15243 131 aa9.38□□□□□ -0.91
UPK3A-201ENST00000216211 HERVK_113P63121 156 aa9.37□□□□□ -0.91
UPK3A-201ENST00000216211 LINC00242Q5T6M2 205 aa9.37□□□□□ -0.91
UPK3A-201ENST00000216211 CD164L2Q6UWJ8 174 aa9.37□□□□□ -0.91
UPK3A-201ENST00000216211 TTTY13Q9BZ97 58 aa9.37□□□□□ -0.91
UPK3A-201ENST00000216211 GEMIN7Q9H840 131 aaKnown RBP9.37□□□□□ -0.91
UPK3A-201ENST00000216211 LINC00474Q9P2X8 69 aa9.37□□□□□ -0.91
UPK3A-201ENST00000216211 MYMXA0A1B0GTQ4 84 aa9.36□□□□□ -0.91
UPK3A-201ENST00000216211 ZNF561-AS1K7EIQ3 104 aa9.36□□□□□ -0.91
UPK3A-201ENST00000216211 SYCNQ0VAF6 134 aa9.36□□□□□ -0.91
UPK3A-201ENST00000216211 PLEKHB2Q96CS7 222 aa9.36□□□□□ -0.91
UPK3A-201ENST00000216211 PKIGQ9Y2B9 76 aa9.36□□□□□ -0.91
UPK3A-201ENST00000216211 H3BRM9 83 aa9.34□□□□□ -0.91
UPK3A-201ENST00000216211 J3QQQ9 107 aa9.34□□□□□ -0.91
UPK3A-201ENST00000216211 LINC01600Q96MT4 127 aa9.34□□□□□ -0.91
UPK3A-201ENST00000216211 TRAV13-1A0A0B4J241 112 aa9.33□□□□□ -0.92
UPK3A-201ENST00000216211 ZNF815PA8K554 130 aa9.33□□□□□ -0.92
UPK3A-201ENST00000216211 MALP21145 153 aa9.33□□□□□ -0.92
UPK3A-201ENST00000216211 HINT1P49773 126 aaPredicted RBP9.33□□□□□ -0.92
UPK3A-201ENST00000216211 TSPEAR-AS2P59090 65 aa9.33□□□□□ -0.92
UPK3A-201ENST00000216211 HSD52Q0P140 79 aa9.33□□□□□ -0.92
UPK3A-201ENST00000216211 LINC00469Q8N7U9 141 aa9.33□□□□□ -0.92
UPK3A-201ENST00000216211 CDKN2A-AS1Q9UH64 79 aa9.33□□□□□ -0.92
UPK3A-201ENST00000216211 LOC107984640A0A0U1RRK4 108 aa9.32□□□□□ -0.92
UPK3A-201ENST00000216211 LGALS3P17931 250 aaKnown RBP9.32□□□□□ -0.92
UPK3A-201ENST00000216211 PTTG1IPP53801 180 aa9.32□□□□□ -0.92
UPK3A-201ENST00000216211 GAGE2BQ13066 116 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms