RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 SERTAD4-AS1Q5TG53 156 aa9.46□□□□□ -0.9
CACNA1A-230ENST00000636768 LRP1Q07954 4544 aaKnown RBP9.46□□□□□ -0.9
CACNA1A-230ENST00000636768 Q6ZRU5 148 aa9.45□□□□□ -0.9
CACNA1A-230ENST00000636768 ATP5L2Q7Z4Y8 100 aa9.45□□□□□ -0.9
CACNA1A-230ENST00000636768 C5orf38Q86SI9 138 aa9.45□□□□□ -0.9
CACNA1A-230ENST00000636768 SPANXA1Q9NS26 97 aa9.45□□□□□ -0.9
CACNA1A-230ENST00000636768 COLCA2A8K830 154 aa9.44□□□□□ -0.9
CACNA1A-230ENST00000636768 APOMO95445 188 aa9.44□□□□□ -0.9
CACNA1A-230ENST00000636768 MT-ND4LP03901 98 aa9.44□□□□□ -0.9
CACNA1A-230ENST00000636768 RAB5BP61020 215 aa9.44□□□□□ -0.9
CACNA1A-230ENST00000636768 ORMDL3Q8N138 153 aa9.44□□□□□ -0.9
CACNA1A-230ENST00000636768 CAMK2N2Q96S95 79 aa9.44□□□□□ -0.9
CACNA1A-230ENST00000636768 RAB5AP20339 215 aa9.43□□□□□ -0.9
CACNA1A-230ENST00000636768 TMEM136Q6ZRR5 245 aa9.43□□□□□ -0.9
CACNA1A-230ENST00000636768 LOC107984640A0A0U1RRK4 108 aa9.42□□□□□ -0.9
CACNA1A-230ENST00000636768 PRR3P79522 188 aaKnown RBP9.42□□□□□ -0.9
CACNA1A-230ENST00000636768 SPAG11BQ08648 103 aa9.42□□□□□ -0.9
CACNA1A-230ENST00000636768 PNRC1Q12796 327 aaPredicted RBP9.42□□□□□ -0.9
CACNA1A-230ENST00000636768 GAGE2BQ13066 116 aa9.42□□□□□ -0.9
CACNA1A-230ENST00000636768 PRELID3AQ96N28 172 aa9.42□□□□□ -0.9
CACNA1A-230ENST00000636768 IFITM10A6NMD0 228 aa9.41□□□□□ -0.9
CACNA1A-230ENST00000636768 PTTG1IPP53801 180 aa9.41□□□□□ -0.9
CACNA1A-230ENST00000636768 C2orf48Q96LS8 159 aa9.41□□□□□ -0.9
CACNA1A-230ENST00000636768 OPRPNQ99935 248 aaPredicted RBP9.41□□□□□ -0.9
CACNA1A-230ENST00000636768 MRPS36P82909 103 aaKnown RBP9.4□□□□□ -0.9
CACNA1A-230ENST00000636768 ANAPC16Q96DE5 110 aa9.4□□□□□ -0.9
CACNA1A-230ENST00000636768 FAT3Q8TDW7 4589 aa9.39□□□□□ -0.91
CACNA1A-230ENST00000636768 IFI27P40305 119 aaPredicted RBP9.39□□□□□ -0.91
CACNA1A-230ENST00000636768 RPL18AQ02543 176 aaKnown RBP9.39□□□□□ -0.91
CACNA1A-230ENST00000636768 OR10D4PQ8NGN7 298 aa9.39□□□□□ -0.91
CACNA1A-230ENST00000636768 ORAOV1Q8WV07 137 aa9.39□□□□□ -0.91
CACNA1A-230ENST00000636768 FAM104AQ969W3 186 aa9.39□□□□□ -0.91
CACNA1A-230ENST00000636768 LOC389332A0A1B0GUA5 103 aa9.38□□□□□ -0.91
CACNA1A-230ENST00000636768 MAP1LC3AQ9H492 121 aa9.38□□□□□ -0.91
CACNA1A-230ENST00000636768 PLA2G2DQ9UNK4 145 aa9.38□□□□□ -0.91
CACNA1A-230ENST00000636768 LAMTOR2Q9Y2Q5 125 aa9.38□□□□□ -0.91
CACNA1A-230ENST00000636768 PKHD1L1Q86WI1 4243 aa9.37□□□□□ -0.91
CACNA1A-230ENST00000636768 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.37□□□□□ -0.91
CACNA1A-230ENST00000636768 MT1HL1P0DM35 61 aa9.37□□□□□ -0.91
CACNA1A-230ENST00000636768 TGIF2-C20orf24A0A0A6YYL0 155 aa9.36□□□□□ -0.91
CACNA1A-230ENST00000636768 IGHV3OR16-9A0A0B4J2B5 98 aa9.36□□□□□ -0.91
CACNA1A-230ENST00000636768 S100A6P06703 90 aa9.36□□□□□ -0.91
CACNA1A-230ENST00000636768 CTDSP1Q9GZU7 261 aa9.36□□□□□ -0.91
CACNA1A-230ENST00000636768 A0A0J9YXV3 536 aa9.35□□□□□ -0.91
CACNA1A-230ENST00000636768 Q6ZRP5 223 aa9.35□□□□□ -0.91
CACNA1A-230ENST00000636768 TMEM141Q96I45 108 aa9.35□□□□□ -0.91
CACNA1A-230ENST00000636768 PYGO1Q9Y3Y4 419 aa9.35□□□□□ -0.91
CACNA1A-230ENST00000636768 IGLV4-3A0A075B6K6 122 aa9.34□□□□□ -0.91
CACNA1A-230ENST00000636768 PRSS47A8MTI9 375 aa9.34□□□□□ -0.91
CACNA1A-230ENST00000636768 F8WDY8 70 aa9.34□□□□□ -0.91
CACNA1A-230ENST00000636768 NDUFA1O15239 70 aa9.34□□□□□ -0.91
CACNA1A-230ENST00000636768 RNF151Q2KHN1 245 aa9.34□□□□□ -0.91
CACNA1A-230ENST00000636768 A0A1W2PNN7 141 aa9.33□□□□□ -0.92
CACNA1A-230ENST00000636768 C9orf116Q5BN46 136 aaPredicted RBP9.33□□□□□ -0.92
CACNA1A-230ENST00000636768 Q6ZN92 141 aa9.33□□□□□ -0.92
CACNA1A-230ENST00000636768 TEX43Q6ZNM6 134 aa9.33□□□□□ -0.92
CACNA1A-230ENST00000636768 LINC00518Q8N0U6 118 aa9.33□□□□□ -0.92
CACNA1A-230ENST00000636768 Q8N8P6 123 aa9.33□□□□□ -0.92
CACNA1A-230ENST00000636768 YPEL4Q96NS1 127 aa9.33□□□□□ -0.92
CACNA1A-230ENST00000636768 MRPL35Q9NZE8 188 aaKnown RBP9.33□□□□□ -0.92
CACNA1A-230ENST00000636768 CYSLTR1Q9Y271 337 aa9.33□□□□□ -0.92
CACNA1A-230ENST00000636768 AKR1D1P51857 326 aa9.32□□□□□ -0.92
CACNA1A-230ENST00000636768 LINC00242Q5T6M2 205 aa9.32□□□□□ -0.92
CACNA1A-230ENST00000636768 SPINK6Q6UWN8 80 aa9.32□□□□□ -0.92
CACNA1A-230ENST00000636768 C2orf66Q6UXQ4 117 aa9.32□□□□□ -0.92
CACNA1A-230ENST00000636768 IMMP2LQ96T52 175 aa9.32□□□□□ -0.92
CACNA1A-230ENST00000636768 C2orf88Q9BSF0 95 aa9.32□□□□□ -0.92
CACNA1A-230ENST00000636768 A0A087WZ39 114 aa9.31□□□□□ -0.92
CACNA1A-230ENST00000636768 C5orf52A6NGY3 159 aa9.31□□□□□ -0.92
CACNA1A-230ENST00000636768 ORMDL2Q53FV1 153 aa9.31□□□□□ -0.92
CACNA1A-230ENST00000636768 SNRPEP62304 92 aaKnown RBP9.3□□□□□ -0.92
CACNA1A-230ENST00000636768 C10orf25Q5T742 122 aa9.3□□□□□ -0.92
CACNA1A-230ENST00000636768 REG3GQ6UW15 175 aa9.3□□□□□ -0.92
CACNA1A-230ENST00000636768 UNQ6190/PRO20217Q6UXQ8 127 aa9.3□□□□□ -0.92
CACNA1A-230ENST00000636768 LINC01600Q96MT4 127 aa9.3□□□□□ -0.92
CACNA1A-230ENST00000636768 NXT2Q9NPJ8 142 aaKnown RBP9.3□□□□□ -0.92
CACNA1A-230ENST00000636768 HMCN2Q8NDA2 5059 aa9.29□□□□□ -0.92
CACNA1A-230ENST00000636768 MT-ND6P03923 174 aa9.29□□□□□ -0.92
CACNA1A-230ENST00000636768 UBE2D1P51668 147 aa9.29□□□□□ -0.92
CACNA1A-230ENST00000636768 VCX2Q9H322 139 aa9.29□□□□□ -0.92
CACNA1A-230ENST00000636768 C6orf48Q9UBA6 75 aa9.29□□□□□ -0.92
CACNA1A-230ENST00000636768 K7EMI3 77 aa9.28□□□□□ -0.92
CACNA1A-230ENST00000636768 S100PP25815 95 aa9.28□□□□□ -0.92
CACNA1A-230ENST00000636768 ZC2HC1BQ5TFG8 222 aa9.28□□□□□ -0.92
CACNA1A-230ENST00000636768 PHF5AQ7RTV0 110 aaKnown RBP9.28□□□□□ -0.92
CACNA1A-230ENST00000636768 GAGE2EQ4V326 116 aa9.27□□□□□ -0.93
CACNA1A-230ENST00000636768 GAGE2DQ9UEU5 116 aa9.27□□□□□ -0.93
CACNA1A-230ENST00000636768 PSORS1C2Q9UIG4 136 aa9.27□□□□□ -0.93
CACNA1A-230ENST00000636768 NPSP0C0P6 89 aa9.26□□□□□ -0.93
CACNA1A-230ENST00000636768 TLX1NBP0CAT3 122 aa9.26□□□□□ -0.93
CACNA1A-230ENST00000636768 FABP9Q0Z7S8 132 aa9.26□□□□□ -0.93
CACNA1A-230ENST00000636768 SRSF9Q13242 221 aaKnown RBP eCLIP9.26□□□□□ -0.93
CACNA1A-230ENST00000636768 KIAA0087Q14695 138 aa9.26□□□□□ -0.93
CACNA1A-230ENST00000636768 KIAA1644Q3SXP7 199 aa9.26□□□□□ -0.93
CACNA1A-230ENST00000636768 LINC00173Q6ZV60 143 aa9.26□□□□□ -0.93
CACNA1A-230ENST00000636768 PACRGQ96M98 296 aaPredicted RBP9.26□□□□□ -0.93
CACNA1A-230ENST00000636768 AMELXQ99217 191 aa9.26□□□□□ -0.93
CACNA1A-230ENST00000636768 TRAV9-1A0A075B6T8 112 aa9.25□□□□□ -0.93
CACNA1A-230ENST00000636768 TRBV30A0A0K0K1B3 111 aa9.25□□□□□ -0.93
CACNA1A-230ENST00000636768 FAM168BA1KXE4 195 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms