RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 GAP43P17677 238 aa-2.21□□□□□ -2.76
CDKL5-210ENST00000636046 HSD11B1P28845 292 aa-2.21□□□□□ -2.76
CDKL5-210ENST00000636046 PEX19P40855 299 aa-2.21□□□□□ -2.76
CDKL5-210ENST00000636046 AIF1P55008 147 aa-2.21□□□□□ -2.76
CDKL5-210ENST00000636046 RPL38P63173 70 aaKnown RBP-2.21□□□□□ -2.76
CDKL5-210ENST00000636046 LCN2P80188 198 aa-2.21□□□□□ -2.76
CDKL5-210ENST00000636046 PMAIP1Q13794 54 aa-2.21□□□□□ -2.76
CDKL5-210ENST00000636046 TMED2Q15363 201 aa-2.21□□□□□ -2.76
CDKL5-210ENST00000636046 DNAL1Q4LDG9 190 aa-2.21□□□□□ -2.76
CDKL5-210ENST00000636046 PSMG4Q5JS54 123 aa-2.21□□□□□ -2.76
CDKL5-210ENST00000636046 NCOR1P1Q9H4R4 102 aa-2.21□□□□□ -2.76
CDKL5-210ENST00000636046 NXT2Q9NPJ8 142 aaKnown RBP-2.21□□□□□ -2.76
CDKL5-210ENST00000636046 MED14O60244 1454 aa-2.21□□□□□ -2.76
CDKL5-210ENST00000636046 AQRO60306 1485 aaKnown RBP eCLIP-2.21□□□□□ -2.76
CDKL5-210ENST00000636046 EIF4G3O43432 1585 aaKnown RBP-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 CPSF1Q10570 1443 aaKnown RBP-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 RGPD8O14715 1765 aaPredicted RBP-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 RGPD5Q99666 1765 aa-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 HMGN4O00479 90 aa-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 HLA-DRAP01903 254 aa-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 OCMP0CE72 109 aaPredicted RBP-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 PVALBP20472 110 aaPredicted RBP-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 CRYGSP22914 178 aa-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 RPL12P30050 165 aaKnown RBP-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 RABIFP47224 123 aa-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 PCBD1P61457 104 aa-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 UBE2G1P62253 170 aa-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 LSM3P62310 102 aaKnown RBP-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 CCL8P80075 99 aa-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 CBX3Q13185 183 aa-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 FLOT2Q14254 428 aa-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 C9orf153Q5TBE3 101 aa-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 MRPL54Q6P161 138 aaKnown RBP-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 BLIDQ8IZY5 108 aa-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 CNPY4Q8N129 248 aa-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 TMEM191AQ9H0A3 160 aa-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 RWDD1Q9H446 243 aaPredicted RBP-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 DYNLRB1Q9NP97 96 aa-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 LSM2Q9Y333 95 aaKnown RBP-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 NOP16Q9Y3C1 178 aaKnown RBP-2.22□□□□□ -2.76
CDKL5-210ENST00000636046 PLB1Q6P1J6 1458 aa-2.22□□□□□ -2.77
CDKL5-210ENST00000636046 BTAF1O14981 1849 aa-2.22□□□□□ -2.77
CDKL5-210ENST00000636046 ROBO1Q9Y6N7 1651 aa-2.22□□□□□ -2.77
CDKL5-210ENST00000636046 DOCK2Q92608 1830 aa-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 A0A1B0GWA3 101 aa-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 EEF1E1-BLOC1S5C9J1V9 151 aa-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 CXCL11O14625 94 aa-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 HBDP02042 147 aa-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 TRGC2P03986 189 aa-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 C8GP07360 202 aa-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 SAA2P0DJI9 122 aaPredicted RBP-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 FABP2P12104 132 aa-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 GNGT1P63211 74 aa-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 CLVS2Q5SYC1 327 aa-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 LINC01545Q5VT33 79 aa-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 CENPQQ7L2Z9 268 aaPredicted RBP-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 CERS2Q96G23 380 aa-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 TSGA13Q96PP4 275 aa-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 GON7Q9BXV9 100 aa-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 ZC3H13Q5T200 1668 aaKnown RBP-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 GOLGB1Q14789 3259 aaKnown RBP-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 PHLPP1O60346 1717 aa-2.23□□□□□ -2.77
CDKL5-210ENST00000636046 MYH13Q9UKX3 1938 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 SPHKAPQ2M3C7 1700 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 TRBV19A0A075B6N1 114 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 TRAV4A0A0B4J268 109 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 LOC285095A0A1B0GVY8 99 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 J3QLW9 94 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 SSNA1O43805 119 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 SNCGO76070 127 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 IFNA14P01570 189 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 RPS27P42677 84 aaKnown RBP-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 PSME3P61289 254 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 CCDC152Q4G0S7 254 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 SPANXN1Q5VSR9 72 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 RPS27LQ71UM5 84 aaKnown RBP-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 CCDC170Q8IYT3 715 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 OR51D1Q8NGF3 324 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 ATP6V0E2Q8NHE4 81 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 PPP1R2P1Q96PQ5 205 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 GLTPQ9NZD2 209 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 GCNT4Q9P109 453 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 PKIGQ9Y2B9 76 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 ARL2-SNX15V9GYD0 113 aa-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 N4BP2Q86UW6 1770 aaPredicted RBP-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 PDCD11Q14690 1871 aaKnown RBP-2.24□□□□□ -2.77
CDKL5-210ENST00000636046 SUPT6HQ7KZ85 1726 aaKnown RBP-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 CAMSAP2Q08AD1 1489 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 TCOF1Q13428 1488 aaKnown RBP-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 LRRC9Q6ZRR7 1453 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 CD163L1Q9NR16 1453 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 TGIF2-C20orf24A0A0A6YYL0 155 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 BORCS7-ASMTA0A0B4J1R7 106 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 RNF103-CHMP3A0A140T963 221 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 H0Y9P7 68 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 H3BQF6 201 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 M0QX08 132 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 CHP2O43745 196 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 OCM2P0CE71 109 aa-2.25□□□□□ -2.77
CDKL5-210ENST00000636046 HMGA1P17096 107 aaKnown RBP-2.25□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms