RNA–Protein interactions for RNA: ENST00000633522.1

LINC01002-229, Transcript of long intergenic non-protein coding RNA 1002, human

TSL 5

Gene LINC01002, Length 570 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01002-229	ENST00000633522	CAMP	P49913	170 aa		6.31	□□□□□ -1.4
LINC01002-229	ENST00000633522	RPL32	P62910	135 aa	Known RBP	6.31	□□□□□ -1.4
LINC01002-229	ENST00000633522	SMIM15	Q7Z3B0	74 aa		6.31	□□□□□ -1.4
LINC01002-229	ENST00000633522	IGLV7-46	A0A075B6I9	117 aa		6.3	□□□□□ -1.4
LINC01002-229	ENST00000633522		A0A087X002	238 aa		6.3	□□□□□ -1.4
LINC01002-229	ENST00000633522		A0A1B0GUV1	79 aa		6.3	□□□□□ -1.4
LINC01002-229	ENST00000633522	GAGE12H	A6NDE8	117 aa		6.3	□□□□□ -1.4
LINC01002-229	ENST00000633522		M0QY20	66 aa		6.3	□□□□□ -1.4
LINC01002-229	ENST00000633522	IQCJ	Q1A5X6	159 aa		6.3	□□□□□ -1.4
LINC01002-229	ENST00000633522	MRPL51	Q4U2R6	128 aa	Known RBP	6.3	□□□□□ -1.4
LINC01002-229	ENST00000633522	CFAP161	Q6P656	301 aa		6.3	□□□□□ -1.4
LINC01002-229	ENST00000633522	AMN1	Q8IY45	258 aa		6.3	□□□□□ -1.4
LINC01002-229	ENST00000633522	NRAC	Q8N912	160 aa		6.3	□□□□□ -1.4
LINC01002-229	ENST00000633522	PPP1R17	O96001	155 aa		6.29	□□□□□ -1.4
LINC01002-229	ENST00000633522	APCS	P02743	223 aa		6.29	□□□□□ -1.4
LINC01002-229	ENST00000633522	C9orf116	Q5BN46	136 aa	Predicted RBP	6.29	□□□□□ -1.4
LINC01002-229	ENST00000633522	SUMO4	Q6EEV6	95 aa		6.29	□□□□□ -1.4
LINC01002-229	ENST00000633522	ALKBH7	Q9BT30	221 aa	Predicted RBP	6.29	□□□□□ -1.4
LINC01002-229	ENST00000633522	MRPL18	Q9H0U6	180 aa	Known RBP	6.29	□□□□□ -1.4
LINC01002-229	ENST00000633522	LINC01546	A6NGU7	62 aa		6.28	□□□□□ -1.4
LINC01002-229	ENST00000633522	SMIM17	P0DL12	118 aa		6.28	□□□□□ -1.4
LINC01002-229	ENST00000633522	ORMDL3	Q8N138	153 aa		6.28	□□□□□ -1.4
LINC01002-229	ENST00000633522	LINC00526	Q96FQ7	95 aa		6.28	□□□□□ -1.4
LINC01002-229	ENST00000633522	C20orf78	Q9BR46	151 aa		6.28	□□□□□ -1.4
LINC01002-229	ENST00000633522	PKIG	Q9Y2B9	76 aa		6.28	□□□□□ -1.4
LINC01002-229	ENST00000633522	TRAPPC1	Q9Y5R8	145 aa		6.28	□□□□□ -1.4
LINC01002-229	ENST00000633522	TRGC2	P03986	189 aa		6.27	□□□□□ -1.41
LINC01002-229	ENST00000633522	POLR2K	P53803	58 aa	Known RBP	6.27	□□□□□ -1.41
LINC01002-229	ENST00000633522	FABP9	Q0Z7S8	132 aa		6.27	□□□□□ -1.41
LINC01002-229	ENST00000633522	COA6	Q5JTJ3	125 aa	Known RBP	6.27	□□□□□ -1.41
LINC01002-229	ENST00000633522	CARD19	Q96LW7	228 aa		6.27	□□□□□ -1.41
LINC01002-229	ENST00000633522	NIT2	Q9NQR4	276 aa		6.27	□□□□□ -1.41
LINC01002-229	ENST00000633522	TRBV25-1	A0A075B6N4	114 aa		6.26	□□□□□ -1.41
LINC01002-229	ENST00000633522	TRBV27	A0A0K0K1C4	114 aa		6.26	□□□□□ -1.41
LINC01002-229	ENST00000633522		D6R8Y8	96 aa		6.26	□□□□□ -1.41
LINC01002-229	ENST00000633522	ZNF56	Q15929	161 aa		6.26	□□□□□ -1.41
LINC01002-229	ENST00000633522	TMEM97	Q5BJF2	176 aa		6.26	□□□□□ -1.41
LINC01002-229	ENST00000633522		K7EMI3	77 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	HIST1H2BK	O60814	126 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	TNFRSF6B	O95407	300 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	NPY	P01303	97 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	HIST1H2BJ	P06899	126 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	MGP	P08493	103 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	HIST1H2BO	P23527	126 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	CKS2	P33552	79 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	HIST1H2BB	P33778	126 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	HIST1H2BD	P58876	126 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	HIST1H2BC	P62807	126 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	HIST2H2BE	Q16778	126 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	C18orf32	Q8TCD1	76 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	HIST1H2BH	Q93079	126 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	PRELID3A	Q96N28	172 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	HIST1H2BN	Q99877	126 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	HIST1H2BM	Q99879	126 aa		6.25	□□□□□ -1.41
LINC01002-229	ENST00000633522	NCR2	O95944	276 aa		6.24	□□□□□ -1.41
LINC01002-229	ENST00000633522	SST	P61278	116 aa		6.24	□□□□□ -1.41
LINC01002-229	ENST00000633522	SUMO2	P61956	95 aa	Known RBP	6.24	□□□□□ -1.41
LINC01002-229	ENST00000633522	FOXI1	Q12951	378 aa		6.24	□□□□□ -1.41
LINC01002-229	ENST00000633522	GAGE2B	Q13066	116 aa		6.24	□□□□□ -1.41
LINC01002-229	ENST00000633522	RPL39L	Q96EH5	51 aa	Known RBP	6.24	□□□□□ -1.41
LINC01002-229	ENST00000633522	PPDPF	Q9H3Y8	114 aa		6.24	□□□□□ -1.41
LINC01002-229	ENST00000633522	LOC107984640	A0A0U1RRK4	108 aa		6.23	□□□□□ -1.41
LINC01002-229	ENST00000633522	SMKR1	H3BMG3	65 aa		6.23	□□□□□ -1.41
LINC01002-229	ENST00000633522	ESD	P10768	282 aa		6.23	□□□□□ -1.41
LINC01002-229	ENST00000633522	KIAA1644	Q3SXP7	199 aa		6.23	□□□□□ -1.41
LINC01002-229	ENST00000633522	URB1-AS1	Q96HZ7	61 aa		6.23	□□□□□ -1.41
LINC01002-229	ENST00000633522	SMIM2	Q9BVW6	85 aa		6.23	□□□□□ -1.41
LINC01002-229	ENST00000633522		A0A087WZ39	114 aa		6.22	□□□□□ -1.41
LINC01002-229	ENST00000633522	IGHV1-24	A0A0C4DH33	117 aa		6.22	□□□□□ -1.41
LINC01002-229	ENST00000633522	SDHAF1	A6NFY7	115 aa		6.22	□□□□□ -1.41
LINC01002-229	ENST00000633522	C1orf196	B1AJZ1	125 aa		6.22	□□□□□ -1.41
LINC01002-229	ENST00000633522		F5H697	171 aa		6.22	□□□□□ -1.41
LINC01002-229	ENST00000633522	TCAP	O15273	167 aa		6.22	□□□□□ -1.41
LINC01002-229	ENST00000633522	LINC00310	P59036	64 aa		6.22	□□□□□ -1.41
LINC01002-229	ENST00000633522	KRTAP13-3	Q3SY46	172 aa		6.22	□□□□□ -1.41
LINC01002-229	ENST00000633522	LINC00173	Q6ZV60	143 aa		6.22	□□□□□ -1.41
LINC01002-229	ENST00000633522		Q8N8P6	123 aa		6.22	□□□□□ -1.41
LINC01002-229	ENST00000633522	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	6.22	□□□□□ -1.41
LINC01002-229	ENST00000633522	ST20	Q9HBF5	79 aa		6.22	□□□□□ -1.41
LINC01002-229	ENST00000633522	NXT2	Q9NPJ8	142 aa	Known RBP	6.22	□□□□□ -1.41
LINC01002-229	ENST00000633522	RAB5B	P61020	215 aa		6.21	□□□□□ -1.42
LINC01002-229	ENST00000633522	SYCN	Q0VAF6	134 aa		6.21	□□□□□ -1.42
LINC01002-229	ENST00000633522	KRTAP13-2	Q52LG2	175 aa		6.21	□□□□□ -1.42
LINC01002-229	ENST00000633522	KRTAP7-1	Q8IUC3	87 aa		6.21	□□□□□ -1.42
LINC01002-229	ENST00000633522	MAP1LC3A	Q9H492	121 aa		6.21	□□□□□ -1.42
LINC01002-229	ENST00000633522	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	6.2	□□□□□ -1.42
LINC01002-229	ENST00000633522		I3L3M4	83 aa		6.2	□□□□□ -1.42
LINC01002-229	ENST00000633522	VCY	O14598	125 aa		6.2	□□□□□ -1.42
LINC01002-229	ENST00000633522	TSHB	P01222	138 aa		6.2	□□□□□ -1.42
LINC01002-229	ENST00000633522	PMCH	P20382	165 aa		6.2	□□□□□ -1.42
LINC01002-229	ENST00000633522	CHCHD1	Q96BP2	118 aa	Known RBP	6.2	□□□□□ -1.42
LINC01002-229	ENST00000633522	FGF6	P10767	208 aa		6.19	□□□□□ -1.42
LINC01002-229	ENST00000633522	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	6.19	□□□□□ -1.42
LINC01002-229	ENST00000633522	TYMSOS	Q8TAI1	123 aa		6.19	□□□□□ -1.42
LINC01002-229	ENST00000633522	PACRG	Q96M98	296 aa	Predicted RBP	6.19	□□□□□ -1.42
LINC01002-229	ENST00000633522		A0A096LNJ9	63 aa		6.18	□□□□□ -1.42
LINC01002-229	ENST00000633522	FAM168B	A1KXE4	195 aa		6.18	□□□□□ -1.42
LINC01002-229	ENST00000633522	LINC01549	A6NIU2	74 aa		6.18	□□□□□ -1.42
LINC01002-229	ENST00000633522	LINC00614	P0C842	121 aa		6.18	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms