RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 FCER1GP30273 86 aa7.05□□□□□ -1.28
CPNE3-210ENST00000621245 KRTAP10-8P60410 259 aa7.05□□□□□ -1.28
CPNE3-210ENST00000621245 RIGQ13278 110 aa7.05□□□□□ -1.28
CPNE3-210ENST00000621245 OPRPNQ99935 248 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-210ENST00000621245 ADIRFQ15847 76 aa7.04□□□□□ -1.28
CPNE3-210ENST00000621245 FAM104BQ5XKR9 115 aa7.04□□□□□ -1.28
CPNE3-210ENST00000621245 LOC107984640A0A0U1RRK4 108 aa7.03□□□□□ -1.28
CPNE3-210ENST00000621245 SMIM27A0A1W2PRY6 76 aa7.03□□□□□ -1.28
CPNE3-210ENST00000621245 FAM74A3Q4VXF1 159 aa7.03□□□□□ -1.28
CPNE3-210ENST00000621245 PHF5AQ7RTV0 110 aaKnown RBP7.03□□□□□ -1.28
CPNE3-210ENST00000621245 KRTAP11-1Q8IUC1 163 aa7.03□□□□□ -1.28
CPNE3-210ENST00000621245 LINC00474Q9P2X8 69 aa7.03□□□□□ -1.28
CPNE3-210ENST00000621245 NAT8BQ9UHF3 227 aa7.03□□□□□ -1.28
CPNE3-210ENST00000621245 C1orf196B1AJZ1 125 aa7.02□□□□□ -1.29
CPNE3-210ENST00000621245 RPL18AQ02543 176 aaKnown RBP7.02□□□□□ -1.29
CPNE3-210ENST00000621245 SPAG11BQ08648 103 aa7.02□□□□□ -1.29
CPNE3-210ENST00000621245 TMEM241Q24JQ0 296 aa7.02□□□□□ -1.29
CPNE3-210ENST00000621245 C9orf116Q5BN46 136 aaPredicted RBP7.02□□□□□ -1.29
CPNE3-210ENST00000621245 C10orf25Q5T742 122 aa7.02□□□□□ -1.29
CPNE3-210ENST00000621245 SPINK6Q6UWN8 80 aa7.02□□□□□ -1.29
CPNE3-210ENST00000621245 CAMK2N2Q96S95 79 aa7.02□□□□□ -1.29
CPNE3-210ENST00000621245 PSORS1C2Q9UIG4 136 aa7.02□□□□□ -1.29
CPNE3-210ENST00000621245 CSDC2Q9Y534 153 aaKnown RBP7.02□□□□□ -1.29
CPNE3-210ENST00000621245 FAM168BA1KXE4 195 aa7.01□□□□□ -1.29
CPNE3-210ENST00000621245 APOMO95445 188 aa7.01□□□□□ -1.29
CPNE3-210ENST00000621245 NPYP01303 97 aa7.01□□□□□ -1.29
CPNE3-210ENST00000621245 MRPL54Q6P161 138 aaKnown RBP7.01□□□□□ -1.29
CPNE3-210ENST00000621245 Q6ZRP5 223 aa7.01□□□□□ -1.29
CPNE3-210ENST00000621245 KIR2DL4Q99706 377 aa7.01□□□□□ -1.29
CPNE3-210ENST00000621245 NAT8Q9UHE5 227 aa7.01□□□□□ -1.29
CPNE3-210ENST00000621245 A0A1B0GXF2 115 aa7□□□□□ -1.29
CPNE3-210ENST00000621245 D6R8Y8 96 aa7□□□□□ -1.29
CPNE3-210ENST00000621245 TCAPO15273 167 aa7□□□□□ -1.29
CPNE3-210ENST00000621245 C2orf48Q96LS8 159 aa7□□□□□ -1.29
CPNE3-210ENST00000621245 TIMM21Q9BVV7 248 aa7□□□□□ -1.29
CPNE3-210ENST00000621245 SMIM2Q9BVW6 85 aa7□□□□□ -1.29
CPNE3-210ENST00000621245 TRBV24-1A0A075B6N3 115 aa6.99□□□□□ -1.29
CPNE3-210ENST00000621245 PPP1R2P9O14990 202 aa6.99□□□□□ -1.29
CPNE3-210ENST00000621245 CKS2P33552 79 aa6.99□□□□□ -1.29
CPNE3-210ENST00000621245 REG3GQ6UW15 175 aa6.99□□□□□ -1.29
CPNE3-210ENST00000621245 KRTAP7-1Q8IUC3 87 aa6.99□□□□□ -1.29
CPNE3-210ENST00000621245 ORAOV1Q8WV07 137 aa6.99□□□□□ -1.29
CPNE3-210ENST00000621245 MUC2Q02817 5179 aa6.99□□□□□ -1.29
CPNE3-210ENST00000621245 IGHV3OR16-9A0A0B4J2B5 98 aa6.98□□□□□ -1.29
CPNE3-210ENST00000621245 RPL32P62910 135 aaKnown RBP6.98□□□□□ -1.29
CPNE3-210ENST00000621245 C20orf78Q9BR46 151 aa6.98□□□□□ -1.29
CPNE3-210ENST00000621245 C6orf48Q9UBA6 75 aa6.98□□□□□ -1.29
CPNE3-210ENST00000621245 PKIGQ9Y2B9 76 aa6.98□□□□□ -1.29
CPNE3-210ENST00000621245 A0A0A0MQY5 61 aa6.97□□□□□ -1.29
CPNE3-210ENST00000621245 PPP1R17O96001 155 aa6.97□□□□□ -1.29
CPNE3-210ENST00000621245 C1orf137Q5JT78 98 aa6.97□□□□□ -1.29
CPNE3-210ENST00000621245 ZC2HC1BQ5TFG8 222 aa6.97□□□□□ -1.29
CPNE3-210ENST00000621245 UNQ6190/PRO20217Q6UXQ8 127 aa6.97□□□□□ -1.29
CPNE3-210ENST00000621245 LINC00862A6NCI5 91 aa6.96□□□□□ -1.3
CPNE3-210ENST00000621245 IFITM10A6NMD0 228 aa6.96□□□□□ -1.3
CPNE3-210ENST00000621245 MT-ND6P03923 174 aa6.96□□□□□ -1.3
CPNE3-210ENST00000621245 HBBP68871 147 aa6.96□□□□□ -1.3
CPNE3-210ENST00000621245 OR10D4PQ8NGN7 298 aa6.96□□□□□ -1.3
CPNE3-210ENST00000621245 MRPL35Q9NZE8 188 aaKnown RBP6.96□□□□□ -1.3
CPNE3-210ENST00000621245 IGLV4-3A0A075B6K6 122 aa6.95□□□□□ -1.3
CPNE3-210ENST00000621245 MRPS36P82909 103 aaKnown RBP6.95□□□□□ -1.3
CPNE3-210ENST00000621245 KIAA0087Q14695 138 aa6.95□□□□□ -1.3
CPNE3-210ENST00000621245 FAM19A5Q7Z5A7 132 aaPredicted RBP6.95□□□□□ -1.3
CPNE3-210ENST00000621245 SPANXA1Q9NS26 97 aa6.95□□□□□ -1.3
CPNE3-210ENST00000621245 MUC17Q685J3 4493 aa6.95□□□□□ -1.3
CPNE3-210ENST00000621245 A0A1B0GW15 77 aa6.94□□□□□ -1.3
CPNE3-210ENST00000621245 SMAGPQ0VAQ4 97 aa6.94□□□□□ -1.3
CPNE3-210ENST00000621245 TMEM18Q96B42 140 aa6.94□□□□□ -1.3
CPNE3-210ENST00000621245 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
CPNE3-210ENST00000621245 PEA15Q15121 130 aa6.93□□□□□ -1.3
CPNE3-210ENST00000621245 GAGE2EQ4V326 116 aa6.93□□□□□ -1.3
CPNE3-210ENST00000621245 LINC00242Q5T6M2 205 aa6.93□□□□□ -1.3
CPNE3-210ENST00000621245 C2orf82Q6UX34 121 aa6.93□□□□□ -1.3
CPNE3-210ENST00000621245 LINC00173Q6ZV60 143 aa6.93□□□□□ -1.3
CPNE3-210ENST00000621245 PRR26Q8N8Z3 221 aa6.93□□□□□ -1.3
CPNE3-210ENST00000621245 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
CPNE3-210ENST00000621245 GAGE2DQ9UEU5 116 aa6.93□□□□□ -1.3
CPNE3-210ENST00000621245 LOC389332A0A1B0GUA5 103 aa6.92□□□□□ -1.3
CPNE3-210ENST00000621245 F8W036 122 aa6.92□□□□□ -1.3
CPNE3-210ENST00000621245 NDUFA1O15239 70 aa6.92□□□□□ -1.3
CPNE3-210ENST00000621245 IGLV7-43P04211 117 aa6.92□□□□□ -1.3
CPNE3-210ENST00000621245 TLX1NBP0CAT3 122 aa6.92□□□□□ -1.3
CPNE3-210ENST00000621245 PRELID3AQ96N28 172 aa6.92□□□□□ -1.3
CPNE3-210ENST00000621245 SMDT1Q9H4I9 107 aa6.92□□□□□ -1.3
CPNE3-210ENST00000621245 A0A087WZ39 114 aa6.91□□□□□ -1.3
CPNE3-210ENST00000621245 C9orf129Q5T035 196 aaKnown RBP6.91□□□□□ -1.3
CPNE3-210ENST00000621245 TMEM136Q6ZRR5 245 aa6.91□□□□□ -1.3
CPNE3-210ENST00000621245 ORMDL3Q8N138 153 aa6.91□□□□□ -1.3
CPNE3-210ENST00000621245 TGIF2-C20orf24A0A0A6YYL0 155 aa6.9□□□□□ -1.3
CPNE3-210ENST00000621245 KRTAP1-4P0C5Y4 121 aa6.9□□□□□ -1.3
CPNE3-210ENST00000621245 UBE2D1P51668 147 aa6.9□□□□□ -1.3
CPNE3-210ENST00000621245 IMMP2LQ96T52 175 aa6.9□□□□□ -1.3
CPNE3-210ENST00000621245 H0Y9J4 135 aa6.89□□□□□ -1.31
CPNE3-210ENST00000621245 M0QXV9 152 aa6.89□□□□□ -1.31
CPNE3-210ENST00000621245 PPBPP02775 128 aa6.89□□□□□ -1.31
CPNE3-210ENST00000621245 S100A8P05109 93 aa6.89□□□□□ -1.31
CPNE3-210ENST00000621245 IFI27P40305 119 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-210ENST00000621245 ATP5L2Q7Z4Y8 100 aa6.89□□□□□ -1.31
CPNE3-210ENST00000621245 TMEM141Q96I45 108 aa6.89□□□□□ -1.31
CPNE3-210ENST00000621245 PYGO1Q9Y3Y4 419 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms