RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 HMCN2Q8NDA2 5059 aa13.99□□□□□ -0.17
ARHGEF1-223ENST00000617585 LOC107984640A0A0U1RRK4 108 aa13.99□□□□□ -0.17
ARHGEF1-223ENST00000617585 RAB5AP20339 215 aa13.99□□□□□ -0.17
ARHGEF1-223ENST00000617585 PTTG1IPP53801 180 aa13.99□□□□□ -0.17
ARHGEF1-223ENST00000617585 OR10D4PQ8NGN7 298 aa13.99□□□□□ -0.17
ARHGEF1-223ENST00000617585 OPRPNQ99935 248 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF1-223ENST00000617585 RNF151Q2KHN1 245 aa13.98□□□□□ -0.17
ARHGEF1-223ENST00000617585 CAMK2N2Q96S95 79 aa13.98□□□□□ -0.17
ARHGEF1-223ENST00000617585 F8WDY8 70 aa13.97□□□□□ -0.17
ARHGEF1-223ENST00000617585 MT1HL1P0DM35 61 aa13.97□□□□□ -0.17
ARHGEF1-223ENST00000617585 PRR3P79522 188 aaKnown RBP13.97□□□□□ -0.17
ARHGEF1-223ENST00000617585 IFI27P40305 119 aaPredicted RBP13.96□□□□□ -0.17
ARHGEF1-223ENST00000617585 IMMP2LQ96T52 175 aa13.96□□□□□ -0.17
ARHGEF1-223ENST00000617585 MAP1LC3AQ9H492 121 aa13.96□□□□□ -0.17
ARHGEF1-223ENST00000617585 IFITM10A6NMD0 228 aa13.95□□□□□ -0.18
ARHGEF1-223ENST00000617585 SPAG11BQ08648 103 aa13.95□□□□□ -0.18
ARHGEF1-223ENST00000617585 IGLV4-3A0A075B6K6 122 aa13.94□□□□□ -0.18
ARHGEF1-223ENST00000617585 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF1-223ENST00000617585 UQCC3Q6UW78 93 aa13.94□□□□□ -0.18
ARHGEF1-223ENST00000617585 Q8N8P6 123 aa13.94□□□□□ -0.18
ARHGEF1-223ENST00000617585 K7EMI3 77 aa13.93□□□□□ -0.18
ARHGEF1-223ENST00000617585 MRPL35Q9NZE8 188 aaKnown RBP13.93□□□□□ -0.18
ARHGEF1-223ENST00000617585 ADCYAP1P18509 176 aa13.92□□□□□ -0.18
ARHGEF1-223ENST00000617585 ORAOV1Q8WV07 137 aa13.92□□□□□ -0.18
ARHGEF1-223ENST00000617585 TMEM141Q96I45 108 aa13.92□□□□□ -0.18
ARHGEF1-223ENST00000617585 TNXBP22105 4242 aa13.92□□□□□ -0.18
ARHGEF1-223ENST00000617585 A0A087WZ39 114 aa13.91□□□□□ -0.18
ARHGEF1-223ENST00000617585 LOC389332A0A1B0GUA5 103 aa13.91□□□□□ -0.18
ARHGEF1-223ENST00000617585 NPSP0C0P6 89 aa13.91□□□□□ -0.18
ARHGEF1-223ENST00000617585 IFITM2Q01629 132 aa13.91□□□□□ -0.18
ARHGEF1-223ENST00000617585 GAGE2BQ13066 116 aa13.91□□□□□ -0.18
ARHGEF1-223ENST00000617585 LINC00242Q5T6M2 205 aa13.91□□□□□ -0.18
ARHGEF1-223ENST00000617585 TMEM218A2RU14 115 aa13.9□□□□□ -0.18
ARHGEF1-223ENST00000617585 TGIF2-C20orf24A0A0A6YYL0 155 aa13.89□□□□□ -0.19
ARHGEF1-223ENST00000617585 A0A1W2PNN7 141 aa13.89□□□□□ -0.19
ARHGEF1-223ENST00000617585 ORMDL2Q53FV1 153 aa13.89□□□□□ -0.19
ARHGEF1-223ENST00000617585 C2orf66Q6UXQ4 117 aa13.89□□□□□ -0.19
ARHGEF1-223ENST00000617585 CTDSP1Q9GZU7 261 aa13.89□□□□□ -0.19
ARHGEF1-223ENST00000617585 CYSLTR1Q9Y271 337 aa13.89□□□□□ -0.19
ARHGEF1-223ENST00000617585 TRAV9-1A0A075B6T8 112 aa13.88□□□□□ -0.19
ARHGEF1-223ENST00000617585 Q6ZRP5 223 aa13.88□□□□□ -0.19
ARHGEF1-223ENST00000617585 LINC01561Q8N1V8 128 aa13.88□□□□□ -0.19
ARHGEF1-223ENST00000617585 AMELXQ99217 191 aa13.88□□□□□ -0.19
ARHGEF1-223ENST00000617585 NDUFA1O15239 70 aa13.87□□□□□ -0.19
ARHGEF1-223ENST00000617585 TLX1NBP0CAT3 122 aa13.87□□□□□ -0.19
ARHGEF1-223ENST00000617585 UBE2D1P51668 147 aa13.87□□□□□ -0.19
ARHGEF1-223ENST00000617585 KIAA0087Q14695 138 aa13.87□□□□□ -0.19
ARHGEF1-223ENST00000617585 TEX43Q6ZNM6 134 aa13.87□□□□□ -0.19
ARHGEF1-223ENST00000617585 NXT2Q9NPJ8 142 aaKnown RBP13.87□□□□□ -0.19
ARHGEF1-223ENST00000617585 SRSF9Q13242 221 aaKnown RBP eCLIP13.86□□□□□ -0.19
ARHGEF1-223ENST00000617585 SPINK6Q6UWN8 80 aa13.86□□□□□ -0.19
ARHGEF1-223ENST00000617585 LINC00173Q6ZV60 143 aa13.86□□□□□ -0.19
ARHGEF1-223ENST00000617585 A0A0J9YXV3 536 aa13.85□□□□□ -0.19
ARHGEF1-223ENST00000617585 IGIPA6NJ69 53 aa13.85□□□□□ -0.19
ARHGEF1-223ENST00000617585 C9orf116Q5BN46 136 aaPredicted RBP13.85□□□□□ -0.19
ARHGEF1-223ENST00000617585 C10orf25Q5T742 122 aa13.85□□□□□ -0.19
ARHGEF1-223ENST00000617585 FAM19A3Q7Z5A8 133 aa13.85□□□□□ -0.19
ARHGEF1-223ENST00000617585 RPL18AQ02543 176 aaKnown RBP13.84□□□□□ -0.19
ARHGEF1-223ENST00000617585 LINC01600Q96MT4 127 aa13.84□□□□□ -0.19
ARHGEF1-223ENST00000617585 SEC11CQ9BY50 192 aa13.84□□□□□ -0.19
ARHGEF1-223ENST00000617585 UNQ6190/PRO20217Q6UXQ8 127 aa13.83□□□□□ -0.2
ARHGEF1-223ENST00000617585 Q6ZN92 141 aa13.83□□□□□ -0.2
ARHGEF1-223ENST00000617585 C2orf88Q9BSF0 95 aa13.83□□□□□ -0.2
ARHGEF1-223ENST00000617585 C6orf48Q9UBA6 75 aa13.83□□□□□ -0.2
ARHGEF1-223ENST00000617585 G0S2P27469 103 aa13.82□□□□□ -0.2
ARHGEF1-223ENST00000617585 VCX2Q9H322 139 aa13.82□□□□□ -0.2
ARHGEF1-223ENST00000617585 TIMM17AQ99595 171 aa13.8□□□□□ -0.2
ARHGEF1-223ENST00000617585 PLA2G2DQ9UNK4 145 aa13.8□□□□□ -0.2
ARHGEF1-223ENST00000617585 TRBV30A0A0K0K1B3 111 aa13.79□□□□□ -0.2
ARHGEF1-223ENST00000617585 ZC2HC1BQ5TFG8 222 aa13.79□□□□□ -0.2
ARHGEF1-223ENST00000617585 KIAA1644Q3SXP7 199 aa13.78□□□□□ -0.2
ARHGEF1-223ENST00000617585 PAPPA-AS1Q5QFB9 102 aa13.78□□□□□ -0.2
ARHGEF1-223ENST00000617585 C10orf91Q5T1B1 145 aa13.78□□□□□ -0.2
ARHGEF1-223ENST00000617585 TOMM6Q96B49 74 aa13.78□□□□□ -0.2
ARHGEF1-223ENST00000617585 GNB1LQ9BYB4 327 aa13.78□□□□□ -0.2
ARHGEF1-223ENST00000617585 LINC01546A6NGU7 62 aa13.77□□□□□ -0.21
ARHGEF1-223ENST00000617585 PSORS1C2Q9UIG4 136 aa13.77□□□□□ -0.21
ARHGEF1-223ENST00000617585 REG3GQ6UW15 175 aa13.76□□□□□ -0.21
ARHGEF1-223ENST00000617585 PHF5AQ7RTV0 110 aaKnown RBP13.76□□□□□ -0.21
ARHGEF1-223ENST00000617585 S100PP25815 95 aa13.75□□□□□ -0.21
ARHGEF1-223ENST00000617585 SEC11AP67812 179 aa13.75□□□□□ -0.21
ARHGEF1-223ENST00000617585 COX19Q49B96 90 aa13.75□□□□□ -0.21
ARHGEF1-223ENST00000617585 LINC01549A6NIU2 74 aa13.74□□□□□ -0.21
ARHGEF1-223ENST00000617585 KRTAP10-8P60410 259 aa13.74□□□□□ -0.21
ARHGEF1-223ENST00000617585 C2orf82Q6UX34 121 aa13.74□□□□□ -0.21
ARHGEF1-223ENST00000617585 ERASQ7Z444 233 aa13.74□□□□□ -0.21
ARHGEF1-223ENST00000617585 ALKBH7Q9BT30 221 aaPredicted RBP13.74□□□□□ -0.21
ARHGEF1-223ENST00000617585 NDUFC2-KCTD14E9PQ53 114 aa13.73□□□□□ -0.21
ARHGEF1-223ENST00000617585 HERVK_113P63121 156 aa13.73□□□□□ -0.21
ARHGEF1-223ENST00000617585 COMMD7Q86VX2 200 aa13.73□□□□□ -0.21
ARHGEF1-223ENST00000617585 Q8IZM0 81 aa13.73□□□□□ -0.21
ARHGEF1-223ENST00000617585 FAM168BA1KXE4 195 aa13.72□□□□□ -0.21
ARHGEF1-223ENST00000617585 KRTAP7-1Q8IUC3 87 aa13.72□□□□□ -0.21
ARHGEF1-223ENST00000617585 CARHSP1Q9Y2V2 147 aaKnown RBP13.72□□□□□ -0.21
ARHGEF1-223ENST00000617585 MT-ND6P03923 174 aa13.71□□□□□ -0.21
ARHGEF1-223ENST00000617585 PACRGQ96M98 296 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF1-223ENST00000617585 UBR4Q5T4S7 5183 aa13.7□□□□□ -0.22
ARHGEF1-223ENST00000617585 RHEBQ15382 184 aa13.7□□□□□ -0.22
ARHGEF1-223ENST00000617585 GAGE2EQ4V326 116 aa13.7□□□□□ -0.22
ARHGEF1-223ENST00000617585 GAGE2DQ9UEU5 116 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms