RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 SMIM6P0DI80 62 aa5.6□□□□□ -1.51
SSBP4-208ENST00000600628 XCL1P47992 114 aa5.6□□□□□ -1.51
SSBP4-208ENST00000600628 S100A12P80511 92 aa5.6□□□□□ -1.51
SSBP4-208ENST00000600628 SS18Q15532 418 aa5.6□□□□□ -1.51
SSBP4-208ENST00000600628 LINC00173Q6ZV60 143 aa5.6□□□□□ -1.51
SSBP4-208ENST00000600628 FAM19A3Q7Z5A8 133 aa5.6□□□□□ -1.51
SSBP4-208ENST00000600628 AMELXQ99217 191 aa5.6□□□□□ -1.51
SSBP4-208ENST00000600628 OPRPNQ99935 248 aaPredicted RBP5.6□□□□□ -1.51
SSBP4-208ENST00000600628 MAP1LC3AQ9H492 121 aa5.6□□□□□ -1.51
SSBP4-208ENST00000600628 IGHV1-58A0A0C4DH39 117 aa5.59□□□□□ -1.51
SSBP4-208ENST00000600628 IGIPA6NJ69 53 aa5.59□□□□□ -1.51
SSBP4-208ENST00000600628 SNRPEP62304 92 aaKnown RBP5.59□□□□□ -1.51
SSBP4-208ENST00000600628 RNASE13Q5GAN3 156 aaKnown RBP5.59□□□□□ -1.51
SSBP4-208ENST00000600628 ALKBH7Q9BT30 221 aaPredicted RBP5.59□□□□□ -1.51
SSBP4-208ENST00000600628 NXT2Q9NPJ8 142 aaKnown RBP5.59□□□□□ -1.51
SSBP4-208ENST00000600628 AP5S1Q9NUS5 200 aa5.59□□□□□ -1.51
SSBP4-208ENST00000600628 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.58□□□□□ -1.52
SSBP4-208ENST00000600628 IFI27P40305 119 aaPredicted RBP5.58□□□□□ -1.52
SSBP4-208ENST00000600628 COX19Q49B96 90 aa5.58□□□□□ -1.52
SSBP4-208ENST00000600628 SPACA4Q8TDM5 124 aa5.58□□□□□ -1.52
SSBP4-208ENST00000600628 TNXBP22105 4242 aa5.58□□□□□ -1.52
SSBP4-208ENST00000600628 IGHV3-64A0A075B6Q5 118 aa5.57□□□□□ -1.52
SSBP4-208ENST00000600628 TRAV13-1A0A0B4J241 112 aa5.57□□□□□ -1.52
SSBP4-208ENST00000600628 COX7A2LO14548 114 aa5.57□□□□□ -1.52
SSBP4-208ENST00000600628 MT-ND6P03923 174 aa5.57□□□□□ -1.52
SSBP4-208ENST00000600628 S100A2P29034 98 aa5.57□□□□□ -1.52
SSBP4-208ENST00000600628 FABP9Q0Z7S8 132 aa5.57□□□□□ -1.52
SSBP4-208ENST00000600628 KIAA1644Q3SXP7 199 aa5.57□□□□□ -1.52
SSBP4-208ENST00000600628 HIGD2BQ4VC39 106 aa5.57□□□□□ -1.52
SSBP4-208ENST00000600628 ORMDL2Q53FV1 153 aa5.57□□□□□ -1.52
SSBP4-208ENST00000600628 LINC00242Q5T6M2 205 aa5.57□□□□□ -1.52
SSBP4-208ENST00000600628 C2orf66Q6UXQ4 117 aa5.57□□□□□ -1.52
SSBP4-208ENST00000600628 PRSS3P2Q8NHM4 247 aa5.57□□□□□ -1.52
SSBP4-208ENST00000600628 C12orf57Q99622 126 aa5.57□□□□□ -1.52
SSBP4-208ENST00000600628 PLAC8Q9NZF1 115 aa5.57□□□□□ -1.52
SSBP4-208ENST00000600628 A0A087WZ39 114 aa5.56□□□□□ -1.52
SSBP4-208ENST00000600628 LOC389332A0A1B0GUA5 103 aa5.56□□□□□ -1.52
SSBP4-208ENST00000600628 UBE2D1P51668 147 aa5.56□□□□□ -1.52
SSBP4-208ENST00000600628 KIAA0087Q14695 138 aa5.56□□□□□ -1.52
SSBP4-208ENST00000600628 OR10D4PQ8NGN7 298 aa5.56□□□□□ -1.52
SSBP4-208ENST00000600628 TOMM6Q96B49 74 aa5.56□□□□□ -1.52
SSBP4-208ENST00000600628 LINC00526Q96FQ7 95 aa5.56□□□□□ -1.52
SSBP4-208ENST00000600628 TMEM141Q96I45 108 aa5.56□□□□□ -1.52
SSBP4-208ENST00000600628 C2orf48Q96LS8 159 aa5.56□□□□□ -1.52
SSBP4-208ENST00000600628 TIMM17AQ99595 171 aa5.56□□□□□ -1.52
SSBP4-208ENST00000600628 CYSLTR1Q9Y271 337 aa5.56□□□□□ -1.52
SSBP4-208ENST00000600628 A0A087WYN8 130 aa5.55□□□□□ -1.52
SSBP4-208ENST00000600628 TGIF2-C20orf24A0A0A6YYL0 155 aa5.55□□□□□ -1.52
SSBP4-208ENST00000600628 COX6A2Q02221 97 aa5.55□□□□□ -1.52
SSBP4-208ENST00000600628 RNF151Q2KHN1 245 aa5.55□□□□□ -1.52
SSBP4-208ENST00000600628 LINC01561Q8N1V8 128 aa5.55□□□□□ -1.52
SSBP4-208ENST00000600628 IGLV4-69A0A075B6H9 119 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 A0A096LNI7 61 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 A0A096LNJ9 63 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 IFITM10A6NMD0 228 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 F8WDY8 70 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 HIST1H2BKO60814 126 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 HIST1H2BJP06899 126 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 CHTF8P0CG12 524 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 HIST1H2BOP23527 126 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 HIST1H2BBP33778 126 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 NDUFA6P56556 154 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 HIST1H2BDP58876 126 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 HIST1H2BCP62807 126 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 SYCNQ0VAF6 134 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 HIST2H2BEQ16778 126 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.54□□□□□ -1.52
SSBP4-208ENST00000600628 C5orf38Q86SI9 138 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 HIST1H2BHQ93079 126 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 DPH3Q96FX2 82 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 URB1-AS1Q96HZ7 61 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 CARD19Q96LW7 228 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 HIST1H2BNQ99877 126 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 HIST1H2BMQ99879 126 aa5.54□□□□□ -1.52
SSBP4-208ENST00000600628 MRPL18Q9H0U6 180 aaKnown RBP5.54□□□□□ -1.52
SSBP4-208ENST00000600628 LINC01549A6NIU2 74 aa5.53□□□□□ -1.52
SSBP4-208ENST00000600628 ZNF561-AS1K7EIQ3 104 aa5.53□□□□□ -1.52
SSBP4-208ENST00000600628 TRGC2P03986 189 aa5.53□□□□□ -1.52
SSBP4-208ENST00000600628 G0S2P27469 103 aa5.53□□□□□ -1.52
SSBP4-208ENST00000600628 ZC2HC1BQ5TFG8 222 aa5.53□□□□□ -1.52
SSBP4-208ENST00000600628 Q6ZRU5 148 aa5.53□□□□□ -1.52
SSBP4-208ENST00000600628 ERASQ7Z444 233 aa5.53□□□□□ -1.52
SSBP4-208ENST00000600628 C18orf32Q8TCD1 76 aa5.53□□□□□ -1.52
SSBP4-208ENST00000600628 KRTAP29-1A8MX34 341 aaPredicted RBP5.52□□□□□ -1.53
SSBP4-208ENST00000600628 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.52□□□□□ -1.53
SSBP4-208ENST00000600628 TLX1NBP0CAT3 122 aa5.52□□□□□ -1.53
SSBP4-208ENST00000600628 RPL37AP61513 92 aaKnown RBP5.52□□□□□ -1.53
SSBP4-208ENST00000600628 COA6Q5JTJ3 125 aaKnown RBP5.52□□□□□ -1.53
SSBP4-208ENST00000600628 TEX43Q6ZNM6 134 aa5.52□□□□□ -1.53
SSBP4-208ENST00000600628 MRPL35Q9NZE8 188 aaKnown RBP5.52□□□□□ -1.53
SSBP4-208ENST00000600628 LINC00474Q9P2X8 69 aa5.52□□□□□ -1.53
SSBP4-208ENST00000600628 IGLV5-45A0A087WSX0 123 aa5.51□□□□□ -1.53
SSBP4-208ENST00000600628 J3QL48 77 aa5.51□□□□□ -1.53
SSBP4-208ENST00000600628 APOMO95445 188 aa5.51□□□□□ -1.53
SSBP4-208ENST00000600628 MALP21145 153 aa5.51□□□□□ -1.53
SSBP4-208ENST00000600628 HNRNPA3P51991 378 aaKnown RBP5.51□□□□□ -1.53
SSBP4-208ENST00000600628 PTTG1IPP53801 180 aa5.51□□□□□ -1.53
SSBP4-208ENST00000600628 C10orf25Q5T742 122 aa5.51□□□□□ -1.53
SSBP4-208ENST00000600628 VCX2Q9H322 139 aa5.51□□□□□ -1.53
SSBP4-208ENST00000600628 PKIGQ9Y2B9 76 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms