RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 MAJINQ3KP22 176 aa9.94□□□□□ -0.82
IRF3-226ENST00000600453 CARD19Q96LW7 228 aa9.94□□□□□ -0.82
IRF3-226ENST00000600453 SPANXA1Q9NS26 97 aa9.94□□□□□ -0.82
IRF3-226ENST00000600453 PRELID3AQ96N28 172 aa9.93□□□□□ -0.82
IRF3-226ENST00000600453 LAMTOR2Q9Y2Q5 125 aa9.93□□□□□ -0.82
IRF3-226ENST00000600453 IGKV2-24A0A0C4DH68 120 aa9.92□□□□□ -0.82
IRF3-226ENST00000600453 NPYP01303 97 aa9.92□□□□□ -0.82
IRF3-226ENST00000600453 MRPS36P82909 103 aaKnown RBP9.92□□□□□ -0.82
IRF3-226ENST00000600453 PRSS47A8MTI9 375 aa9.91□□□□□ -0.82
IRF3-226ENST00000600453 RNASE13Q5GAN3 156 aaKnown RBP9.91□□□□□ -0.82
IRF3-226ENST00000600453 STPG4Q8N801 248 aa9.91□□□□□ -0.82
IRF3-226ENST00000600453 HERC1Q15751 4861 aa9.9□□□□□ -0.82
IRF3-226ENST00000600453 RPL39P62891 51 aaKnown RBP9.9□□□□□ -0.82
IRF3-226ENST00000600453 Q6ZRU5 148 aa9.9□□□□□ -0.82
IRF3-226ENST00000600453 Q6ZUT4 128 aa9.9□□□□□ -0.82
IRF3-226ENST00000600453 LINC00526Q96FQ7 95 aa9.9□□□□□ -0.82
IRF3-226ENST00000600453 C2orf48Q96LS8 159 aa9.9□□□□□ -0.82
IRF3-226ENST00000600453 IGLV4-69A0A075B6H9 119 aa9.89□□□□□ -0.83
IRF3-226ENST00000600453 IFI27P40305 119 aaPredicted RBP9.89□□□□□ -0.83
IRF3-226ENST00000600453 CAMK2N2Q96S95 79 aa9.89□□□□□ -0.83
IRF3-226ENST00000600453 A0A096LNI7 61 aa9.88□□□□□ -0.83
IRF3-226ENST00000600453 LOC107984640A0A0U1RRK4 108 aa9.88□□□□□ -0.83
IRF3-226ENST00000600453 F8WDY8 70 aa9.88□□□□□ -0.83
IRF3-226ENST00000600453 MT-ND6P03923 174 aa9.88□□□□□ -0.83
IRF3-226ENST00000600453 RAB5BP61020 215 aa9.88□□□□□ -0.83
IRF3-226ENST00000600453 C5orf38Q86SI9 138 aa9.88□□□□□ -0.83
IRF3-226ENST00000600453 MAP1LC3AQ9H492 121 aa9.88□□□□□ -0.83
IRF3-226ENST00000600453 PYGO1Q9Y3Y4 419 aa9.88□□□□□ -0.83
IRF3-226ENST00000600453 TGIF2-C20orf24A0A0A6YYL0 155 aa9.87□□□□□ -0.83
IRF3-226ENST00000600453 SERTAD4-AS1Q5TG53 156 aa9.87□□□□□ -0.83
IRF3-226ENST00000600453 OR10D4PQ8NGN7 298 aa9.87□□□□□ -0.83
IRF3-226ENST00000600453 IFITM10A6NMD0 228 aa9.86□□□□□ -0.83
IRF3-226ENST00000600453 K7EMI3 77 aa9.86□□□□□ -0.83
IRF3-226ENST00000600453 GNB1LQ9BYB4 327 aa9.86□□□□□ -0.83
IRF3-226ENST00000600453 IGHV3OR16-9A0A0B4J2B5 98 aa9.85□□□□□ -0.83
IRF3-226ENST00000600453 LOC389332A0A1B0GUA5 103 aa9.85□□□□□ -0.83
IRF3-226ENST00000600453 G0S2P27469 103 aa9.85□□□□□ -0.83
IRF3-226ENST00000600453 RNF151Q2KHN1 245 aa9.85□□□□□ -0.83
IRF3-226ENST00000600453 Q8N8P6 123 aa9.85□□□□□ -0.83
IRF3-226ENST00000600453 OPRPNQ99935 248 aaPredicted RBP9.85□□□□□ -0.83
IRF3-226ENST00000600453 HNRNPA3P51991 378 aaKnown RBP9.84□□□□□ -0.83
IRF3-226ENST00000600453 PTTG1IPP53801 180 aa9.84□□□□□ -0.83
IRF3-226ENST00000600453 SPAG11BQ08648 103 aa9.84□□□□□ -0.83
IRF3-226ENST00000600453 ORMDL2Q53FV1 153 aa9.84□□□□□ -0.83
IRF3-226ENST00000600453 FAM104AQ969W3 186 aa9.84□□□□□ -0.83
IRF3-226ENST00000600453 GAGE2BQ13066 116 aa9.83□□□□□ -0.84
IRF3-226ENST00000600453 TMEM141Q96I45 108 aa9.83□□□□□ -0.84
IRF3-226ENST00000600453 CYSLTR1Q9Y271 337 aa9.83□□□□□ -0.84
IRF3-226ENST00000600453 NPSP0C0P6 89 aa9.82□□□□□ -0.84
IRF3-226ENST00000600453 Q6ZN92 141 aa9.82□□□□□ -0.84
IRF3-226ENST00000600453 TEX43Q6ZNM6 134 aa9.82□□□□□ -0.84
IRF3-226ENST00000600453 ORAOV1Q8WV07 137 aa9.82□□□□□ -0.84
IRF3-226ENST00000600453 C2orf88Q9BSF0 95 aa9.82□□□□□ -0.84
IRF3-226ENST00000600453 NXT2Q9NPJ8 142 aaKnown RBP9.82□□□□□ -0.84
IRF3-226ENST00000600453 NDUFA1O15239 70 aa9.81□□□□□ -0.84
IRF3-226ENST00000600453 MRPL35Q9NZE8 188 aaKnown RBP9.81□□□□□ -0.84
IRF3-226ENST00000600453 TRAPPC1Q9Y5R8 145 aa9.81□□□□□ -0.84
IRF3-226ENST00000600453 IGLV4-3A0A075B6K6 122 aa9.8□□□□□ -0.84
IRF3-226ENST00000600453 PAPPA-AS1Q5QFB9 102 aa9.8□□□□□ -0.84
IRF3-226ENST00000600453 C2orf66Q6UXQ4 117 aa9.8□□□□□ -0.84
IRF3-226ENST00000600453 VCX2Q9H322 139 aa9.8□□□□□ -0.84
IRF3-226ENST00000600453 A0A087WZ39 114 aa9.79□□□□□ -0.84
IRF3-226ENST00000600453 TRGC2P03986 189 aa9.79□□□□□ -0.84
IRF3-226ENST00000600453 S100A6P06703 90 aa9.79□□□□□ -0.84
IRF3-226ENST00000600453 PRR3P79522 188 aaKnown RBP9.79□□□□□ -0.84
IRF3-226ENST00000600453 LINC00242Q5T6M2 205 aa9.79□□□□□ -0.84
IRF3-226ENST00000600453 Q6ZRP5 223 aa9.79□□□□□ -0.84
IRF3-226ENST00000600453 LINC01561Q8N1V8 128 aa9.79□□□□□ -0.84
IRF3-226ENST00000600453 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.78□□□□□ -0.84
IRF3-226ENST00000600453 RPL18AQ02543 176 aaKnown RBP9.78□□□□□ -0.84
IRF3-226ENST00000600453 TMA7Q9Y2S6 64 aaKnown RBP9.78□□□□□ -0.84
IRF3-226ENST00000600453 LRP1Q07954 4544 aaKnown RBP9.76□□□□□ -0.85
IRF3-226ENST00000600453 LINC01549A6NIU2 74 aa9.76□□□□□ -0.85
IRF3-226ENST00000600453 UBE2D1P51668 147 aa9.76□□□□□ -0.85
IRF3-226ENST00000600453 SEC11AP67812 179 aa9.76□□□□□ -0.85
IRF3-226ENST00000600453 SPINK6Q6UWN8 80 aa9.76□□□□□ -0.85
IRF3-226ENST00000600453 AMELXQ99217 191 aa9.76□□□□□ -0.85
IRF3-226ENST00000600453 MRPL18Q9H0U6 180 aaKnown RBP9.76□□□□□ -0.85
IRF3-226ENST00000600453 TLX1NBP0CAT3 122 aa9.75□□□□□ -0.85
IRF3-226ENST00000600453 FABP9Q0Z7S8 132 aa9.75□□□□□ -0.85
IRF3-226ENST00000600453 C9orf116Q5BN46 136 aaPredicted RBP9.75□□□□□ -0.85
IRF3-226ENST00000600453 A0A0J9YXV3 536 aa9.74□□□□□ -0.85
IRF3-226ENST00000600453 TRBV30A0A0K0K1B3 111 aa9.74□□□□□ -0.85
IRF3-226ENST00000600453 A0A1W2PNN7 141 aa9.74□□□□□ -0.85
IRF3-226ENST00000600453 IGIPA6NJ69 53 aa9.74□□□□□ -0.85
IRF3-226ENST00000600453 HIST1H2BKO60814 126 aa9.74□□□□□ -0.85
IRF3-226ENST00000600453 HIST1H2BJP06899 126 aa9.74□□□□□ -0.85
IRF3-226ENST00000600453 HIST1H2BOP23527 126 aa9.74□□□□□ -0.85
IRF3-226ENST00000600453 HIST1H2BBP33778 126 aa9.74□□□□□ -0.85
IRF3-226ENST00000600453 HIST1H2BDP58876 126 aa9.74□□□□□ -0.85
IRF3-226ENST00000600453 HIST1H2BCP62807 126 aa9.74□□□□□ -0.85
IRF3-226ENST00000600453 HIST2H2BEQ16778 126 aa9.74□□□□□ -0.85
IRF3-226ENST00000600453 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.74□□□□□ -0.85
IRF3-226ENST00000600453 UNQ6190/PRO20217Q6UXQ8 127 aa9.74□□□□□ -0.85
IRF3-226ENST00000600453 HIST1H2BHQ93079 126 aa9.74□□□□□ -0.85
IRF3-226ENST00000600453 HIST1H2BNQ99877 126 aa9.74□□□□□ -0.85
IRF3-226ENST00000600453 HIST1H2BMQ99879 126 aa9.74□□□□□ -0.85
IRF3-226ENST00000600453 KIAA0087Q14695 138 aa9.73□□□□□ -0.85
IRF3-226ENST00000600453 COA6Q5JTJ3 125 aaKnown RBP9.73□□□□□ -0.85
IRF3-226ENST00000600453 REG3GQ6UW15 175 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms