RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, human

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00343-208	ENST00000599264	ANKRD20A5P	A0PJZ0	165 aa		2.77	□□□□□ -1.97
LINC00343-208	ENST00000599264		M0R381	172 aa		2.77	□□□□□ -1.97
LINC00343-208	ENST00000599264	CST7	O76096	145 aa		2.77	□□□□□ -1.97
LINC00343-208	ENST00000599264	APOM	O95445	188 aa		2.77	□□□□□ -1.97
LINC00343-208	ENST00000599264	FGF7	P21781	194 aa		2.77	□□□□□ -1.97
LINC00343-208	ENST00000599264	MRPS10	P82664	201 aa	Known RBP	2.77	□□□□□ -1.97
LINC00343-208	ENST00000599264	RPL18A	Q02543	176 aa	Known RBP	2.77	□□□□□ -1.97
LINC00343-208	ENST00000599264	SS18	Q15532	418 aa		2.77	□□□□□ -1.97
LINC00343-208	ENST00000599264	ZNF56	Q15929	161 aa		2.77	□□□□□ -1.97
LINC00343-208	ENST00000599264	DNLZ	Q5SXM8	178 aa		2.77	□□□□□ -1.97
LINC00343-208	ENST00000599264	TMEM243	Q9BU79	118 aa		2.77	□□□□□ -1.97
LINC00343-208	ENST00000599264	NPCDR1	Q9BY65	106 aa		2.77	□□□□□ -1.97
LINC00343-208	ENST00000599264	SMIM26	A0A096LP01	95 aa		2.76	□□□□□ -1.97
LINC00343-208	ENST00000599264		B4DEV8	164 aa		2.76	□□□□□ -1.97
LINC00343-208	ENST00000599264	APCS	P02743	223 aa		2.76	□□□□□ -1.97
LINC00343-208	ENST00000599264	RAB5A	P20339	215 aa		2.76	□□□□□ -1.97
LINC00343-208	ENST00000599264	PFN2	P35080	140 aa		2.76	□□□□□ -1.97
LINC00343-208	ENST00000599264	RPL23	P62829	140 aa	Known RBP	2.76	□□□□□ -1.97
LINC00343-208	ENST00000599264	NEDD8	Q15843	81 aa		2.76	□□□□□ -1.97
LINC00343-208	ENST00000599264	FAM74A1	Q5RGS3	127 aa		2.76	□□□□□ -1.97
LINC00343-208	ENST00000599264	NUP35	Q8NFH5	326 aa		2.76	□□□□□ -1.97
LINC00343-208	ENST00000599264	ISOC2	Q96AB3	205 aa		2.76	□□□□□ -1.97
LINC00343-208	ENST00000599264	GRIFIN	A4D1Z8	144 aa		2.75	□□□□□ -1.97
LINC00343-208	ENST00000599264	KRBOX1	C9JBD0	128 aa		2.75	□□□□□ -1.97
LINC00343-208	ENST00000599264	NDUFC2-KCTD14	E9PQ53	114 aa		2.75	□□□□□ -1.97
LINC00343-208	ENST00000599264	TPT1	P13693	172 aa	Known RBP	2.75	□□□□□ -1.97
LINC00343-208	ENST00000599264	PMCH	P20382	165 aa		2.75	□□□□□ -1.97
LINC00343-208	ENST00000599264	UBE2B	P63146	152 aa		2.75	□□□□□ -1.97
LINC00343-208	ENST00000599264	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	2.75	□□□□□ -1.97
LINC00343-208	ENST00000599264	KRTAP13-1	Q8IUC0	172 aa		2.75	□□□□□ -1.97
LINC00343-208	ENST00000599264	ZFP82	Q8N141	532 aa		2.75	□□□□□ -1.97
LINC00343-208	ENST00000599264	MED28	Q9H204	178 aa		2.75	□□□□□ -1.97
LINC00343-208	ENST00000599264	FLVCR2	Q9UPI3	526 aa		2.75	□□□□□ -1.97
LINC00343-208	ENST00000599264	C9orf170	A2RU37	121 aa		2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	COLCA2	A8K830	154 aa		2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	FABP5P3	A8MUU1	101 aa		2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264		M0R036	132 aa		2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	UBE2L6	O14933	153 aa		2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	TCRA	P04437	139 aa		2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	S100A9	P06702	114 aa	Known RBP	2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	S100A11	P31949	105 aa		2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	XCL1	P47992	114 aa		2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	NCS1	P62166	190 aa		2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	FLI1	Q01543	452 aa	Predicted RBP	2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	IAH1	Q2TAA2	248 aa	Predicted RBP	2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	KRTAP21-2	Q3LI59	83 aa		2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	KHDC3L	Q587J8	217 aa		2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	PRNT	Q86SH4	94 aa		2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	C11orf1	Q9H5F2	150 aa		2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	GSKIP	Q9P0R6	139 aa		2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	RSL24D1	Q9UHA3	163 aa	Known RBP	2.74	□□□□□ -1.97
LINC00343-208	ENST00000599264	IGSF23	A1L1A6	192 aa		2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264	C19orf71	A6NCJ1	209 aa		2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264		M0QXV9	152 aa		2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264	BPY2	O14599	106 aa		2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264	CCL25	O15444	150 aa		2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264	RPL12	P30050	165 aa	Known RBP	2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264	SULT1A1	P50225	295 aa		2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264	CRIP1	P50238	77 aa		2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264	TMBIM6	P55061	237 aa		2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264	VBP1	P61758	197 aa		2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264	ATP6V1F	Q16864	119 aa		2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264	SAPCD1	Q5SSQ6	148 aa		2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264	OR5A1	Q8NGJ0	315 aa		2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264	MCFD2	Q8NI22	146 aa		2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264	AP3S1	Q92572	193 aa		2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264	ZNF471	Q9BX82	626 aa	Predicted RBP	2.73	□□□□□ -1.97
LINC00343-208	ENST00000599264	IGHV3OR16-9	A0A0B4J2B5	98 aa		2.72	□□□□□ -1.97
LINC00343-208	ENST00000599264		A0A1B0GVG6	124 aa		2.72	□□□□□ -1.97
LINC00343-208	ENST00000599264	MB	P02144	154 aa		2.72	□□□□□ -1.97
LINC00343-208	ENST00000599264	ESD	P10768	282 aa		2.72	□□□□□ -1.97
LINC00343-208	ENST00000599264	TAS2R45	P59539	299 aa		2.72	□□□□□ -1.97
LINC00343-208	ENST00000599264	HBG1	P69891	147 aa		2.72	□□□□□ -1.97
LINC00343-208	ENST00000599264	HBG2	P69892	147 aa		2.72	□□□□□ -1.97
LINC00343-208	ENST00000599264	FAM229B	Q4G0N7	80 aa		2.72	□□□□□ -1.97
LINC00343-208	ENST00000599264	C5orf17	Q8NAS9	161 aa		2.72	□□□□□ -1.97
LINC00343-208	ENST00000599264	OR10AG1	Q8NH19	301 aa		2.72	□□□□□ -1.97
LINC00343-208	ENST00000599264	SLC25A21	Q9BQT8	299 aa	Predicted RBP	2.72	□□□□□ -1.97
LINC00343-208	ENST00000599264	LSM5	Q9Y4Y9	91 aa	Known RBP	2.72	□□□□□ -1.97
LINC00343-208	ENST00000599264	KMT2D	O14686	5537 aa		2.72	□□□□□ -1.97
LINC00343-208	ENST00000599264	TMSB15B	A0A087X1C1	80 aa		2.71	□□□□□ -1.98
LINC00343-208	ENST00000599264	LINC00959	A0A1B0GUT2	108 aa		2.71	□□□□□ -1.98
LINC00343-208	ENST00000599264	CENPX	A8MT69	81 aa		2.71	□□□□□ -1.98
LINC00343-208	ENST00000599264		M0QY20	66 aa		2.71	□□□□□ -1.98
LINC00343-208	ENST00000599264	NUPR1	O60356	82 aa		2.71	□□□□□ -1.98
LINC00343-208	ENST00000599264	FAU	P35544	74 aa	Known RBP	2.71	□□□□□ -1.98
LINC00343-208	ENST00000599264	RPL28	P46779	137 aa	Known RBP	2.71	□□□□□ -1.98
LINC00343-208	ENST00000599264	NKX2-5	P52952	324 aa	Predicted RBP	2.71	□□□□□ -1.98
LINC00343-208	ENST00000599264	STX12	Q86Y82	276 aa		2.71	□□□□□ -1.98
LINC00343-208	ENST00000599264	MRPS26	Q9BYN8	205 aa	Known RBP	2.71	□□□□□ -1.98
LINC00343-208	ENST00000599264	KCNIP2	Q9NS61	270 aa		2.71	□□□□□ -1.98
LINC00343-208	ENST00000599264	IGKV2D-26	A0A0A0MRZ7	120 aa		2.7	□□□□□ -1.98
LINC00343-208	ENST00000599264		A0A1W2PPV4	95 aa		2.7	□□□□□ -1.98
LINC00343-208	ENST00000599264	RGS5	O15539	181 aa		2.7	□□□□□ -1.98
LINC00343-208	ENST00000599264	SH2D1A	O60880	128 aa		2.7	□□□□□ -1.98
LINC00343-208	ENST00000599264	COTL1	Q14019	142 aa		2.7	□□□□□ -1.98
LINC00343-208	ENST00000599264	PCOTH	Q58A44	107 aa		2.7	□□□□□ -1.98
LINC00343-208	ENST00000599264	AMMECR1L	Q6DCA0	310 aa		2.7	□□□□□ -1.98
LINC00343-208	ENST00000599264	COX6B2	Q6YFQ2	88 aa		2.7	□□□□□ -1.98
LINC00343-208	ENST00000599264	DAND5	Q8N907	189 aa		2.7	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 78 ms