RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 SPINK6Q6UWN8 80 aa10.68□□□□□ -0.7
PNKP-210ENST00000597965 AMN1Q8IY45 258 aa10.68□□□□□ -0.7
PNKP-210ENST00000597965 FGF6P10767 208 aa10.67□□□□□ -0.7
PNKP-210ENST00000597965 MRPL51Q4U2R6 128 aaKnown RBP10.67□□□□□ -0.7
PNKP-210ENST00000597965 OR5A1Q8NGJ0 315 aa10.67□□□□□ -0.7
PNKP-210ENST00000597965 TRAV26-2A0A0B4J265 109 aa10.66□□□□□ -0.7
PNKP-210ENST00000597965 A0A0J9YXV3 536 aa10.66□□□□□ -0.7
PNKP-210ENST00000597965 FABP4P15090 132 aa10.66□□□□□ -0.7
PNKP-210ENST00000597965 RAB4AP20338 218 aa10.66□□□□□ -0.7
PNKP-210ENST00000597965 IGHV1-58A0A0C4DH39 117 aa10.65□□□□□ -0.7
PNKP-210ENST00000597965 SDHAF1A6NFY7 115 aa10.65□□□□□ -0.7
PNKP-210ENST00000597965 I3L3M4 83 aa10.65□□□□□ -0.7
PNKP-210ENST00000597965 FOXI1Q12951 378 aa10.65□□□□□ -0.7
PNKP-210ENST00000597965 OR10D4PQ8NGN7 298 aa10.65□□□□□ -0.7
PNKP-210ENST00000597965 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.64□□□□□ -0.71
PNKP-210ENST00000597965 A0A096LNI7 61 aa10.64□□□□□ -0.71
PNKP-210ENST00000597965 IGKV2-29A2NJV5 120 aaPredicted RBP10.64□□□□□ -0.71
PNKP-210ENST00000597965 PMCHP20382 165 aa10.64□□□□□ -0.71
PNKP-210ENST00000597965 Q6ZRP5 223 aa10.64□□□□□ -0.71
PNKP-210ENST00000597965 TMEM18Q96B42 140 aa10.64□□□□□ -0.71
PNKP-210ENST00000597965 URB1-AS1Q96HZ7 61 aa10.64□□□□□ -0.71
PNKP-210ENST00000597965 CARD19Q96LW7 228 aa10.64□□□□□ -0.71
PNKP-210ENST00000597965 PACRGQ96M98 296 aaPredicted RBP10.64□□□□□ -0.71
PNKP-210ENST00000597965 D6R8Y8 96 aa10.63□□□□□ -0.71
PNKP-210ENST00000597965 ZNF561-AS1K7EIQ3 104 aa10.63□□□□□ -0.71
PNKP-210ENST00000597965 XCL1P47992 114 aa10.63□□□□□ -0.71
PNKP-210ENST00000597965 SS18Q15532 418 aa10.63□□□□□ -0.71
PNKP-210ENST00000597965 LINC00518Q8N0U6 118 aa10.63□□□□□ -0.71
PNKP-210ENST00000597965 RPL39LQ96EH5 51 aaKnown RBP10.63□□□□□ -0.71
PNKP-210ENST00000597965 PPBPP02775 128 aa10.62□□□□□ -0.71
PNKP-210ENST00000597965 ORMDL3Q8N138 153 aa10.62□□□□□ -0.71
PNKP-210ENST00000597965 MRAP2Q96G30 205 aa10.62□□□□□ -0.71
PNKP-210ENST00000597965 PRELID3AQ96N28 172 aa10.62□□□□□ -0.71
PNKP-210ENST00000597965 TNXBP22105 4242 aa10.61□□□□□ -0.71
PNKP-210ENST00000597965 TRBV6-5A0A0K0K1A5 114 aa10.61□□□□□ -0.71
PNKP-210ENST00000597965 LINC00959A0A1B0GUT2 108 aa10.61□□□□□ -0.71
PNKP-210ENST00000597965 SMKR1H3BMG3 65 aa10.61□□□□□ -0.71
PNKP-210ENST00000597965 CCL25O15444 150 aa10.61□□□□□ -0.71
PNKP-210ENST00000597965 CKS2P33552 79 aa10.61□□□□□ -0.71
PNKP-210ENST00000597965 SYCNQ0VAF6 134 aa10.6□□□□□ -0.71
PNKP-210ENST00000597965 CD164L2Q6UWJ8 174 aa10.6□□□□□ -0.71
PNKP-210ENST00000597965 CHCHD1Q96BP2 118 aaKnown RBP10.6□□□□□ -0.71
PNKP-210ENST00000597965 LRP2P98164 4655 aa10.59□□□□□ -0.71
PNKP-210ENST00000597965 GAS8-AS1O95177 125 aa10.59□□□□□ -0.71
PNKP-210ENST00000597965 NPYP01303 97 aa10.59□□□□□ -0.71
PNKP-210ENST00000597965 LINC00614P0C842 121 aa10.59□□□□□ -0.71
PNKP-210ENST00000597965 SMIM6P0DI80 62 aa10.59□□□□□ -0.71
PNKP-210ENST00000597965 KRTAP10-8P60410 259 aa10.59□□□□□ -0.71
PNKP-210ENST00000597965 SMAGPQ0VAQ4 97 aa10.59□□□□□ -0.71
PNKP-210ENST00000597965 ST20Q9HBF5 79 aa10.59□□□□□ -0.71
PNKP-210ENST00000597965 LAMTOR2Q9Y2Q5 125 aa10.59□□□□□ -0.71
PNKP-210ENST00000597965 PYY3Q5JQD4 70 aa10.58□□□□□ -0.72
PNKP-210ENST00000597965 MRPL52Q86TS9 123 aaKnown RBP10.58□□□□□ -0.72
PNKP-210ENST00000597965 HSBP1O75506 76 aa10.57□□□□□ -0.72
PNKP-210ENST00000597965 MALP21145 153 aa10.57□□□□□ -0.72
PNKP-210ENST00000597965 SRSF9Q13242 221 aaKnown RBP eCLIP10.57□□□□□ -0.72
PNKP-210ENST00000597965 FAM19A2Q8N3H0 131 aa10.57□□□□□ -0.72
PNKP-210ENST00000597965 CDC42SE2Q9NRR3 84 aa10.57□□□□□ -0.72
PNKP-210ENST00000597965 LOC107984640A0A0U1RRK4 108 aa10.56□□□□□ -0.72
PNKP-210ENST00000597965 PRSS47A8MTI9 375 aa10.56□□□□□ -0.72
PNKP-210ENST00000597965 TNFRSF6BO95407 300 aa10.56□□□□□ -0.72
PNKP-210ENST00000597965 PTTG1IPP53801 180 aa10.56□□□□□ -0.72
PNKP-210ENST00000597965 JOSD1Q15040 202 aaPredicted RBP10.56□□□□□ -0.72
PNKP-210ENST00000597965 ZNF664Q8N3J9 261 aa10.56□□□□□ -0.72
PNKP-210ENST00000597965 NRACQ8N912 160 aa10.56□□□□□ -0.72
PNKP-210ENST00000597965 C12orf57Q99622 126 aa10.56□□□□□ -0.72
PNKP-210ENST00000597965 LOC389332A0A1B0GUA5 103 aa10.55□□□□□ -0.72
PNKP-210ENST00000597965 TSHBP01222 138 aa10.55□□□□□ -0.72
PNKP-210ENST00000597965 IFI27P40305 119 aaPredicted RBP10.55□□□□□ -0.72
PNKP-210ENST00000597965 TRBV27A0A0K0K1C4 114 aa10.54□□□□□ -0.72
PNKP-210ENST00000597965 LINC01546A6NGU7 62 aa10.54□□□□□ -0.72
PNKP-210ENST00000597965 PPP1R17O96001 155 aa10.54□□□□□ -0.72
PNKP-210ENST00000597965 FA2HQ7L5A8 372 aa10.54□□□□□ -0.72
PNKP-210ENST00000597965 LINC00526Q96FQ7 95 aa10.54□□□□□ -0.72
PNKP-210ENST00000597965 MAP1LC3AQ9H492 121 aa10.54□□□□□ -0.72
PNKP-210ENST00000597965 IGLV4-69A0A075B6H9 119 aa10.53□□□□□ -0.72
PNKP-210ENST00000597965 COX7A2LO14548 114 aa10.53□□□□□ -0.72
PNKP-210ENST00000597965 GAGE2BQ13066 116 aa10.53□□□□□ -0.72
PNKP-210ENST00000597965 CSDC2Q9Y534 153 aaKnown RBP10.53□□□□□ -0.72
PNKP-210ENST00000597965 FCER1GP30273 86 aa10.52□□□□□ -0.73
PNKP-210ENST00000597965 POLR2KP53803 58 aaKnown RBP10.52□□□□□ -0.73
PNKP-210ENST00000597965 CAMK2N2Q96S95 79 aa10.52□□□□□ -0.73
PNKP-210ENST00000597965 VCYO14598 125 aa10.51□□□□□ -0.73
PNKP-210ENST00000597965 APOMO95445 188 aa10.51□□□□□ -0.73
PNKP-210ENST00000597965 PMCHL1Q16048 86 aa10.51□□□□□ -0.73
PNKP-210ENST00000597965 Q8N8P6 123 aa10.51□□□□□ -0.73
PNKP-210ENST00000597965 NXT2Q9NPJ8 142 aaKnown RBP10.51□□□□□ -0.73
PNKP-210ENST00000597965 C2orf48Q96LS8 159 aa10.5□□□□□ -0.73
PNKP-210ENST00000597965 KIR2DL4Q99706 377 aa10.5□□□□□ -0.73
PNKP-210ENST00000597965 C20orf78Q9BR46 151 aa10.5□□□□□ -0.73
PNKP-210ENST00000597965 RNF213Q63HN8 5207 aa10.49□□□□□ -0.73
PNKP-210ENST00000597965 A0A096LNJ9 63 aa10.48□□□□□ -0.73
PNKP-210ENST00000597965 C3orf79P0CE67 100 aa10.48□□□□□ -0.73
PNKP-210ENST00000597965 ODF1Q14990 250 aa10.48□□□□□ -0.73
PNKP-210ENST00000597965 KRTDAPP60985 99 aa10.47□□□□□ -0.73
PNKP-210ENST00000597965 SUMO2P61956 95 aaKnown RBP10.47□□□□□ -0.73
PNKP-210ENST00000597965 RPL32P62910 135 aaKnown RBP10.47□□□□□ -0.73
PNKP-210ENST00000597965 RNF151Q2KHN1 245 aa10.47□□□□□ -0.73
PNKP-210ENST00000597965 LINC00173Q6ZV60 143 aa10.47□□□□□ -0.73
PNKP-210ENST00000597965 SMIM2Q9BVW6 85 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms