RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 C7orf33Q8WU49 177 aa6.63□□□□□ -1.35
CCDC9-203ENST00000596938 C2orf48Q96LS8 159 aa6.63□□□□□ -1.35
CCDC9-203ENST00000596938 TMEM218A2RU14 115 aa6.62□□□□□ -1.35
CCDC9-203ENST00000596938 Q6ZRU5 148 aa6.62□□□□□ -1.35
CCDC9-203ENST00000596938 Q8N8P6 123 aa6.62□□□□□ -1.35
CCDC9-203ENST00000596938 OPRPNQ99935 248 aaPredicted RBP6.62□□□□□ -1.35
CCDC9-203ENST00000596938 MAP1LC3AQ9H492 121 aa6.62□□□□□ -1.35
CCDC9-203ENST00000596938 LOC389332A0A1B0GUA5 103 aa6.61□□□□□ -1.35
CCDC9-203ENST00000596938 F8WDY8 70 aa6.61□□□□□ -1.35
CCDC9-203ENST00000596938 K7EMI3 77 aa6.61□□□□□ -1.35
CCDC9-203ENST00000596938 IFI27P40305 119 aaPredicted RBP6.61□□□□□ -1.35
CCDC9-203ENST00000596938 RNF151Q2KHN1 245 aa6.61□□□□□ -1.35
CCDC9-203ENST00000596938 OR10D4PQ8NGN7 298 aa6.61□□□□□ -1.35
CCDC9-203ENST00000596938 CAMK2N2Q96S95 79 aa6.61□□□□□ -1.35
CCDC9-203ENST00000596938 CTDSP1Q9GZU7 261 aa6.61□□□□□ -1.35
CCDC9-203ENST00000596938 LOC107984640A0A0U1RRK4 108 aa6.6□□□□□ -1.35
CCDC9-203ENST00000596938 IFITM10A6NMD0 228 aa6.6□□□□□ -1.35
CCDC9-203ENST00000596938 ADCYAP1P18509 176 aa6.6□□□□□ -1.35
CCDC9-203ENST00000596938 PTTG1IPP53801 180 aa6.6□□□□□ -1.35
CCDC9-203ENST00000596938 HMCN2Q8NDA2 5059 aa6.59□□□□□ -1.35
CCDC9-203ENST00000596938 IGLV4-3A0A075B6K6 122 aa6.59□□□□□ -1.35
CCDC9-203ENST00000596938 TRAV9-1A0A075B6T8 112 aa6.59□□□□□ -1.35
CCDC9-203ENST00000596938 NPSP0C0P6 89 aa6.59□□□□□ -1.35
CCDC9-203ENST00000596938 ORMDL2Q53FV1 153 aa6.59□□□□□ -1.35
CCDC9-203ENST00000596938 TMEM141Q96I45 108 aa6.59□□□□□ -1.35
CCDC9-203ENST00000596938 SEC11CQ9BY50 192 aa6.59□□□□□ -1.35
CCDC9-203ENST00000596938 NXT2Q9NPJ8 142 aaKnown RBP6.59□□□□□ -1.35
CCDC9-203ENST00000596938 A0A087WZ39 114 aa6.58□□□□□ -1.36
CCDC9-203ENST00000596938 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.58□□□□□ -1.36
CCDC9-203ENST00000596938 G0S2P27469 103 aa6.58□□□□□ -1.36
CCDC9-203ENST00000596938 SPAG11BQ08648 103 aa6.58□□□□□ -1.36
CCDC9-203ENST00000596938 GAGE2BQ13066 116 aa6.58□□□□□ -1.36
CCDC9-203ENST00000596938 LINC00242Q5T6M2 205 aa6.58□□□□□ -1.36
CCDC9-203ENST00000596938 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
CCDC9-203ENST00000596938 C2orf66Q6UXQ4 117 aa6.58□□□□□ -1.36
CCDC9-203ENST00000596938 ORAOV1Q8WV07 137 aa6.58□□□□□ -1.36
CCDC9-203ENST00000596938 MRPL35Q9NZE8 188 aaKnown RBP6.58□□□□□ -1.36
CCDC9-203ENST00000596938 CYSLTR1Q9Y271 337 aa6.58□□□□□ -1.36
CCDC9-203ENST00000596938 TGIF2-C20orf24A0A0A6YYL0 155 aa6.57□□□□□ -1.36
CCDC9-203ENST00000596938 IGIPA6NJ69 53 aa6.57□□□□□ -1.36
CCDC9-203ENST00000596938 TEX43Q6ZNM6 134 aa6.57□□□□□ -1.36
CCDC9-203ENST00000596938 VCX2Q9H322 139 aa6.57□□□□□ -1.36
CCDC9-203ENST00000596938 UBE2D1P51668 147 aa6.56□□□□□ -1.36
CCDC9-203ENST00000596938 PRR3P79522 188 aaKnown RBP6.56□□□□□ -1.36
CCDC9-203ENST00000596938 Q6ZN92 141 aa6.56□□□□□ -1.36
CCDC9-203ENST00000596938 LINC01561Q8N1V8 128 aa6.56□□□□□ -1.36
CCDC9-203ENST00000596938 AMELXQ99217 191 aa6.56□□□□□ -1.36
CCDC9-203ENST00000596938 A0A0J9YXV3 536 aa6.55□□□□□ -1.36
CCDC9-203ENST00000596938 A0A1W2PNN7 141 aa6.55□□□□□ -1.36
CCDC9-203ENST00000596938 NDUFA1O15239 70 aa6.55□□□□□ -1.36
CCDC9-203ENST00000596938 TLX1NBP0CAT3 122 aa6.55□□□□□ -1.36
CCDC9-203ENST00000596938 S100PP25815 95 aa6.55□□□□□ -1.36
CCDC9-203ENST00000596938 KIAA0087Q14695 138 aa6.55□□□□□ -1.36
CCDC9-203ENST00000596938 C10orf91Q5T1B1 145 aa6.55□□□□□ -1.36
CCDC9-203ENST00000596938 FAM19A3Q7Z5A8 133 aa6.55□□□□□ -1.36
CCDC9-203ENST00000596938 C2orf88Q9BSF0 95 aa6.55□□□□□ -1.36
CCDC9-203ENST00000596938 GNB1LQ9BYB4 327 aa6.55□□□□□ -1.36
CCDC9-203ENST00000596938 MT1HL1P0DM35 61 aa6.54□□□□□ -1.36
CCDC9-203ENST00000596938 KIAA1644Q3SXP7 199 aa6.54□□□□□ -1.36
CCDC9-203ENST00000596938 COX19Q49B96 90 aa6.54□□□□□ -1.36
CCDC9-203ENST00000596938 C9orf116Q5BN46 136 aaPredicted RBP6.54□□□□□ -1.36
CCDC9-203ENST00000596938 PAPPA-AS1Q5QFB9 102 aa6.54□□□□□ -1.36
CCDC9-203ENST00000596938 C10orf25Q5T742 122 aa6.54□□□□□ -1.36
CCDC9-203ENST00000596938 UNQ6190/PRO20217Q6UXQ8 127 aa6.54□□□□□ -1.36
CCDC9-203ENST00000596938 Q6ZRP5 223 aa6.54□□□□□ -1.36
CCDC9-203ENST00000596938 LINC00173Q6ZV60 143 aa6.54□□□□□ -1.36
CCDC9-203ENST00000596938 COMMD7Q86VX2 200 aa6.54□□□□□ -1.36
CCDC9-203ENST00000596938 TOMM6Q96B49 74 aa6.54□□□□□ -1.36
CCDC9-203ENST00000596938 SEC11AP67812 179 aa6.53□□□□□ -1.36
CCDC9-203ENST00000596938 RPL18AQ02543 176 aaKnown RBP6.53□□□□□ -1.36
CCDC9-203ENST00000596938 SRSF9Q13242 221 aaKnown RBP eCLIP6.53□□□□□ -1.36
CCDC9-203ENST00000596938 ZC2HC1BQ5TFG8 222 aa6.53□□□□□ -1.36
CCDC9-203ENST00000596938 SPINK6Q6UWN8 80 aa6.53□□□□□ -1.36
CCDC9-203ENST00000596938 TIMM17AQ99595 171 aa6.53□□□□□ -1.36
CCDC9-203ENST00000596938 C6orf48Q9UBA6 75 aa6.53□□□□□ -1.36
CCDC9-203ENST00000596938 CARHSP1Q9Y2V2 147 aaKnown RBP6.53□□□□□ -1.36
CCDC9-203ENST00000596938 TNXBP22105 4242 aa6.53□□□□□ -1.36
CCDC9-203ENST00000596938 TRBV30A0A0K0K1B3 111 aa6.52□□□□□ -1.37
CCDC9-203ENST00000596938 LINC01546A6NGU7 62 aa6.52□□□□□ -1.37
CCDC9-203ENST00000596938 LINC01549A6NIU2 74 aa6.52□□□□□ -1.37
CCDC9-203ENST00000596938 RHEBQ15382 184 aa6.52□□□□□ -1.37
CCDC9-203ENST00000596938 ERASQ7Z444 233 aa6.52□□□□□ -1.37
CCDC9-203ENST00000596938 ALKBH7Q9BT30 221 aaPredicted RBP6.52□□□□□ -1.37
CCDC9-203ENST00000596938 MT-ND6P03923 174 aa6.51□□□□□ -1.37
CCDC9-203ENST00000596938 HERVK_113P63121 156 aa6.51□□□□□ -1.37
CCDC9-203ENST00000596938 LINC01600Q96MT4 127 aa6.51□□□□□ -1.37
CCDC9-203ENST00000596938 C2orf82Q6UX34 121 aa6.5□□□□□ -1.37
CCDC9-203ENST00000596938 SCGB3A1Q96QR1 104 aa6.5□□□□□ -1.37
CCDC9-203ENST00000596938 RPS10P5Q9NQ39 176 aa6.5□□□□□ -1.37
CCDC9-203ENST00000596938 NDUFC2-KCTD14E9PQ53 114 aa6.49□□□□□ -1.37
CCDC9-203ENST00000596938 PRSS2P07478 247 aa6.49□□□□□ -1.37
CCDC9-203ENST00000596938 FABP9Q0Z7S8 132 aa6.49□□□□□ -1.37
CCDC9-203ENST00000596938 C6orf226Q5I0X4 101 aa6.49□□□□□ -1.37
CCDC9-203ENST00000596938 Q8IZM0 81 aa6.49□□□□□ -1.37
CCDC9-203ENST00000596938 PACRGQ96M98 296 aaPredicted RBP6.49□□□□□ -1.37
CCDC9-203ENST00000596938 MRPL18Q9H0U6 180 aaKnown RBP6.49□□□□□ -1.37
CCDC9-203ENST00000596938 CDKN2A-AS1Q9UH64 79 aa6.49□□□□□ -1.37
CCDC9-203ENST00000596938 CKS1BP61024 79 aa6.48□□□□□ -1.37
CCDC9-203ENST00000596938 REG3GQ6UW15 175 aa6.48□□□□□ -1.37
CCDC9-203ENST00000596938 PHF5AQ7RTV0 110 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms