RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 NDUFA5Q16718 116 aa6.61□□□□□ -1.35
VPS4B-207ENST00000591519 GAGE12HA6NDE8 117 aa6.6□□□□□ -1.35
VPS4B-207ENST00000591519 MT1HL1P0DM35 61 aa6.6□□□□□ -1.35
VPS4B-207ENST00000591519 RPL39P62891 51 aaKnown RBP6.6□□□□□ -1.35
VPS4B-207ENST00000591519 CFAP161Q6P656 301 aa6.6□□□□□ -1.35
VPS4B-207ENST00000591519 SLC7A5P1Q8MH63 180 aa6.6□□□□□ -1.35
VPS4B-207ENST00000591519 SPACA4Q8TDM5 124 aa6.6□□□□□ -1.35
VPS4B-207ENST00000591519 MAP1LC3AQ9H492 121 aa6.6□□□□□ -1.35
VPS4B-207ENST00000591519 A0A087WYN8 130 aa6.59□□□□□ -1.35
VPS4B-207ENST00000591519 TGIF2-C20orf24A0A0A6YYL0 155 aa6.59□□□□□ -1.35
VPS4B-207ENST00000591519 PHOX2AO14813 284 aa6.59□□□□□ -1.35
VPS4B-207ENST00000591519 ZNF25P17030 456 aaPredicted RBP6.59□□□□□ -1.35
VPS4B-207ENST00000591519 RAB5AP20339 215 aa6.59□□□□□ -1.35
VPS4B-207ENST00000591519 DPH3Q96FX2 82 aa6.59□□□□□ -1.35
VPS4B-207ENST00000591519 PLAC8Q9NZF1 115 aa6.59□□□□□ -1.35
VPS4B-207ENST00000591519 TRAV9-1A0A075B6T8 112 aa6.58□□□□□ -1.36
VPS4B-207ENST00000591519 SNAPINO95295 136 aa6.58□□□□□ -1.36
VPS4B-207ENST00000591519 XCL1P47992 114 aa6.58□□□□□ -1.36
VPS4B-207ENST00000591519 RPL32P62910 135 aaKnown RBP6.58□□□□□ -1.36
VPS4B-207ENST00000591519 Q6ZUT4 128 aa6.58□□□□□ -1.36
VPS4B-207ENST00000591519 SVBPQ8N300 66 aa6.58□□□□□ -1.36
VPS4B-207ENST00000591519 ZNF664Q8N3J9 261 aa6.58□□□□□ -1.36
VPS4B-207ENST00000591519 C15orf56Q8N910 161 aa6.58□□□□□ -1.36
VPS4B-207ENST00000591519 CHCHD10Q8WYQ3 142 aaPredicted RBP6.58□□□□□ -1.36
VPS4B-207ENST00000591519 TMEM18Q96B42 140 aa6.58□□□□□ -1.36
VPS4B-207ENST00000591519 CDC42SE2Q9NRR3 84 aa6.58□□□□□ -1.36
VPS4B-207ENST00000591519 UBE2D4Q9Y2X8 147 aa6.58□□□□□ -1.36
VPS4B-207ENST00000591519 PKHD1L1Q86WI1 4243 aa6.58□□□□□ -1.36
VPS4B-207ENST00000591519 LINC00959A0A1B0GUT2 108 aa6.57□□□□□ -1.36
VPS4B-207ENST00000591519 CCL25O15444 150 aa6.57□□□□□ -1.36
VPS4B-207ENST00000591519 CHTF8P0CG12 524 aa6.57□□□□□ -1.36
VPS4B-207ENST00000591519 FABP9Q0Z7S8 132 aa6.57□□□□□ -1.36
VPS4B-207ENST00000591519 MRPL52Q86TS9 123 aaKnown RBP6.57□□□□□ -1.36
VPS4B-207ENST00000591519 OPRPNQ99935 248 aaPredicted RBP6.57□□□□□ -1.36
VPS4B-207ENST00000591519 LAMTOR2Q9Y2Q5 125 aa6.57□□□□□ -1.36
VPS4B-207ENST00000591519 TRAV13-1A0A0B4J241 112 aa6.56□□□□□ -1.36
VPS4B-207ENST00000591519 IFI27P40305 119 aaPredicted RBP6.56□□□□□ -1.36
VPS4B-207ENST00000591519 SMAGPQ0VAQ4 97 aa6.56□□□□□ -1.36
VPS4B-207ENST00000591519 SS18Q15532 418 aa6.56□□□□□ -1.36
VPS4B-207ENST00000591519 HIGD2BQ4VC39 106 aa6.56□□□□□ -1.36
VPS4B-207ENST00000591519 GNB1LQ9BYB4 327 aa6.56□□□□□ -1.36
VPS4B-207ENST00000591519 UBR4Q5T4S7 5183 aa6.55□□□□□ -1.36
VPS4B-207ENST00000591519 GVQW2A0A096LPI5 108 aaPredicted RBP6.55□□□□□ -1.36
VPS4B-207ENST00000591519 COX6A2Q02221 97 aa6.55□□□□□ -1.36
VPS4B-207ENST00000591519 Q8N8P6 123 aa6.55□□□□□ -1.36
VPS4B-207ENST00000591519 FOXI1Q12951 378 aa6.54□□□□□ -1.36
VPS4B-207ENST00000591519 PRSS3P2Q8NHM4 247 aa6.54□□□□□ -1.36
VPS4B-207ENST00000591519 TIMM21Q9BVV7 248 aa6.54□□□□□ -1.36
VPS4B-207ENST00000591519 SPANXA1Q9NS26 97 aa6.54□□□□□ -1.36
VPS4B-207ENST00000591519 PRSS47A8MTI9 375 aa6.53□□□□□ -1.36
VPS4B-207ENST00000591519 COX19Q49B96 90 aa6.53□□□□□ -1.36
VPS4B-207ENST00000591519 ZC2HC1BQ5TFG8 222 aa6.53□□□□□ -1.36
VPS4B-207ENST00000591519 C2orf66Q6UXQ4 117 aa6.53□□□□□ -1.36
VPS4B-207ENST00000591519 C7orf33Q8WU49 177 aa6.53□□□□□ -1.36
VPS4B-207ENST00000591519 ALKBH7Q9BT30 221 aaPredicted RBP6.53□□□□□ -1.36
VPS4B-207ENST00000591519 NXT2Q9NPJ8 142 aaKnown RBP6.53□□□□□ -1.36
VPS4B-207ENST00000591519 CSDC2Q9Y534 153 aaKnown RBP6.53□□□□□ -1.36
VPS4B-207ENST00000591519 TRAPPC1Q9Y5R8 145 aa6.53□□□□□ -1.36
VPS4B-207ENST00000591519 IFITM10A6NMD0 228 aa6.52□□□□□ -1.37
VPS4B-207ENST00000591519 MT-ND6P03923 174 aa6.52□□□□□ -1.37
VPS4B-207ENST00000591519 MAJINQ3KP22 176 aa6.52□□□□□ -1.37
VPS4B-207ENST00000591519 ORMDL2Q53FV1 153 aa6.52□□□□□ -1.37
VPS4B-207ENST00000591519 C5orf38Q86SI9 138 aa6.52□□□□□ -1.37
VPS4B-207ENST00000591519 CBLN2Q8IUK8 224 aa6.52□□□□□ -1.37
VPS4B-207ENST00000591519 FAM104AQ969W3 186 aa6.52□□□□□ -1.37
VPS4B-207ENST00000591519 LINC00526Q96FQ7 95 aa6.52□□□□□ -1.37
VPS4B-207ENST00000591519 LINC01600Q96MT4 127 aa6.52□□□□□ -1.37
VPS4B-207ENST00000591519 CYSLTR1Q9Y271 337 aa6.52□□□□□ -1.37
VPS4B-207ENST00000591519 IGLV4-3A0A075B6K6 122 aa6.51□□□□□ -1.37
VPS4B-207ENST00000591519 C1orf196B1AJZ1 125 aa6.51□□□□□ -1.37
VPS4B-207ENST00000591519 MALP21145 153 aa6.51□□□□□ -1.37
VPS4B-207ENST00000591519 CD164L2Q6UWJ8 174 aa6.51□□□□□ -1.37
VPS4B-207ENST00000591519 STPG4Q8N801 248 aa6.51□□□□□ -1.37
VPS4B-207ENST00000591519 LINC00474Q9P2X8 69 aa6.51□□□□□ -1.37
VPS4B-207ENST00000591519 IGHV1-58A0A0C4DH39 117 aa6.5□□□□□ -1.37
VPS4B-207ENST00000591519 IGKV2-24A0A0C4DH68 120 aa6.5□□□□□ -1.37
VPS4B-207ENST00000591519 COX7A2LO14548 114 aa6.5□□□□□ -1.37
VPS4B-207ENST00000591519 PRR3P79522 188 aaKnown RBP6.5□□□□□ -1.37
VPS4B-207ENST00000591519 MRPS36P82909 103 aaKnown RBP6.5□□□□□ -1.37
VPS4B-207ENST00000591519 FA2HQ7L5A8 372 aa6.5□□□□□ -1.37
VPS4B-207ENST00000591519 TMEM141Q96I45 108 aa6.5□□□□□ -1.37
VPS4B-207ENST00000591519 SMCO4Q9NRQ5 59 aa6.5□□□□□ -1.37
VPS4B-207ENST00000591519 PKIGQ9Y2B9 76 aa6.5□□□□□ -1.37
VPS4B-207ENST00000591519 A0A096LNI7 61 aa6.49□□□□□ -1.37
VPS4B-207ENST00000591519 TEX43Q6ZNM6 134 aa6.49□□□□□ -1.37
VPS4B-207ENST00000591519 YPEL4Q96NS1 127 aa6.49□□□□□ -1.37
VPS4B-207ENST00000591519 KRTAP10-8P60410 259 aa6.48□□□□□ -1.37
VPS4B-207ENST00000591519 SRSF9Q13242 221 aaKnown RBP eCLIP6.48□□□□□ -1.37
VPS4B-207ENST00000591519 SPINK6Q6UWN8 80 aa6.48□□□□□ -1.37
VPS4B-207ENST00000591519 Q6ZN92 141 aa6.48□□□□□ -1.37
VPS4B-207ENST00000591519 SCGB3A1Q96QR1 104 aa6.48□□□□□ -1.37
VPS4B-207ENST00000591519 PYGO1Q9Y3Y4 419 aa6.48□□□□□ -1.37
VPS4B-207ENST00000591519 ZNF561-AS1K7EIQ3 104 aa6.47□□□□□ -1.37
VPS4B-207ENST00000591519 K7EMI3 77 aa6.47□□□□□ -1.37
VPS4B-207ENST00000591519 LINC00173Q6ZV60 143 aa6.47□□□□□ -1.37
VPS4B-207ENST00000591519 C18orf32Q8TCD1 76 aa6.47□□□□□ -1.37
VPS4B-207ENST00000591519 TOMM6Q96B49 74 aa6.47□□□□□ -1.37
VPS4B-207ENST00000591519 C2orf88Q9BSF0 95 aa6.47□□□□□ -1.37
VPS4B-207ENST00000591519 VCX2Q9H322 139 aa6.47□□□□□ -1.37
VPS4B-207ENST00000591519 IGLV4-69A0A075B6H9 119 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms