RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 MAJINQ3KP22 176 aa13.46□□□□□ -0.25
LRP3-202ENST00000590275 CTDSP1Q9GZU7 261 aa13.46□□□□□ -0.25
LRP3-202ENST00000590275 SYCNQ0VAF6 134 aa13.45□□□□□ -0.26
LRP3-202ENST00000590275 DPH3Q96FX2 82 aa13.45□□□□□ -0.26
LRP3-202ENST00000590275 PYGO1Q9Y3Y4 419 aa13.45□□□□□ -0.26
LRP3-202ENST00000590275 IFITM10A6NMD0 228 aa13.44□□□□□ -0.26
LRP3-202ENST00000590275 ZNF561-AS1K7EIQ3 104 aa13.44□□□□□ -0.26
LRP3-202ENST00000590275 MALP21145 153 aa13.44□□□□□ -0.26
LRP3-202ENST00000590275 KRTAP29-1A8MX34 341 aaPredicted RBP13.43□□□□□ -0.26
LRP3-202ENST00000590275 IFI27P40305 119 aaPredicted RBP13.43□□□□□ -0.26
LRP3-202ENST00000590275 LINC00173Q6ZV60 143 aa13.43□□□□□ -0.26
LRP3-202ENST00000590275 LINC00242Q5T6M2 205 aa13.41□□□□□ -0.26
LRP3-202ENST00000590275 C2orf66Q6UXQ4 117 aa13.41□□□□□ -0.26
LRP3-202ENST00000590275 STPG4Q8N801 248 aa13.41□□□□□ -0.26
LRP3-202ENST00000590275 CARHSP1Q9Y2V2 147 aaKnown RBP13.41□□□□□ -0.26
LRP3-202ENST00000590275 A0A0J9YXV3 536 aa13.4□□□□□ -0.26
LRP3-202ENST00000590275 SPAG11BQ08648 103 aa13.4□□□□□ -0.26
LRP3-202ENST00000590275 TRAV9-1A0A075B6T8 112 aa13.39□□□□□ -0.27
LRP3-202ENST00000590275 IGIPA6NJ69 53 aa13.39□□□□□ -0.27
LRP3-202ENST00000590275 C10orf25Q5T742 122 aa13.39□□□□□ -0.27
LRP3-202ENST00000590275 TMEM141Q96I45 108 aa13.39□□□□□ -0.27
LRP3-202ENST00000590275 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.38□□□□□ -0.27
LRP3-202ENST00000590275 UBE2D1P51668 147 aa13.38□□□□□ -0.27
LRP3-202ENST00000590275 C2orf48Q96LS8 159 aa13.38□□□□□ -0.27
LRP3-202ENST00000590275 CAMK2N2Q96S95 79 aa13.38□□□□□ -0.27
LRP3-202ENST00000590275 CYSLTR1Q9Y271 337 aa13.38□□□□□ -0.27
LRP3-202ENST00000590275 ORAOV1Q8WV07 137 aa13.37□□□□□ -0.27
LRP3-202ENST00000590275 AMELXQ99217 191 aa13.37□□□□□ -0.27
LRP3-202ENST00000590275 J3QL48 77 aa13.36□□□□□ -0.27
LRP3-202ENST00000590275 PTTG1IPP53801 180 aa13.36□□□□□ -0.27
LRP3-202ENST00000590275 KIAA0087Q14695 138 aa13.36□□□□□ -0.27
LRP3-202ENST00000590275 GNB1LQ9BYB4 327 aa13.36□□□□□ -0.27
LRP3-202ENST00000590275 NXT2Q9NPJ8 142 aaKnown RBP13.36□□□□□ -0.27
LRP3-202ENST00000590275 A0A1W2PNN7 141 aa13.35□□□□□ -0.27
LRP3-202ENST00000590275 APOMO95445 188 aa13.35□□□□□ -0.27
LRP3-202ENST00000590275 GAGE2BQ13066 116 aa13.35□□□□□ -0.27
LRP3-202ENST00000590275 ORMDL2Q53FV1 153 aa13.35□□□□□ -0.27
LRP3-202ENST00000590275 OR10D4PQ8NGN7 298 aa13.35□□□□□ -0.27
LRP3-202ENST00000590275 ALKBH7Q9BT30 221 aaPredicted RBP13.35□□□□□ -0.27
LRP3-202ENST00000590275 RPS10P5Q9NQ39 176 aa13.35□□□□□ -0.27
LRP3-202ENST00000590275 A0A087WZ39 114 aa13.34□□□□□ -0.27
LRP3-202ENST00000590275 LOC107984640A0A0U1RRK4 108 aa13.33□□□□□ -0.28
LRP3-202ENST00000590275 UNQ6190/PRO20217Q6UXQ8 127 aa13.33□□□□□ -0.28
LRP3-202ENST00000590275 TEX43Q6ZNM6 134 aa13.33□□□□□ -0.28
LRP3-202ENST00000590275 K7EMI3 77 aa13.32□□□□□ -0.28
LRP3-202ENST00000590275 S100PP25815 95 aa13.32□□□□□ -0.28
LRP3-202ENST00000590275 RHEBQ15382 184 aa13.32□□□□□ -0.28
LRP3-202ENST00000590275 TOMM6Q96B49 74 aa13.31□□□□□ -0.28
LRP3-202ENST00000590275 C6orf48Q9UBA6 75 aa13.31□□□□□ -0.28
LRP3-202ENST00000590275 TGIF2-C20orf24A0A0A6YYL0 155 aa13.3□□□□□ -0.28
LRP3-202ENST00000590275 LINC01546A6NGU7 62 aa13.3□□□□□ -0.28
LRP3-202ENST00000590275 MRPL18Q9H0U6 180 aaKnown RBP13.3□□□□□ -0.28
LRP3-202ENST00000590275 VCX2Q9H322 139 aa13.3□□□□□ -0.28
LRP3-202ENST00000590275 MRPL35Q9NZE8 188 aaKnown RBP13.3□□□□□ -0.28
LRP3-202ENST00000590275 LINC00474Q9P2X8 69 aa13.3□□□□□ -0.28
LRP3-202ENST00000590275 OXTP01178 125 aa13.29□□□□□ -0.28
LRP3-202ENST00000590275 PRR3P79522 188 aaKnown RBP13.29□□□□□ -0.28
LRP3-202ENST00000590275 RNF151Q2KHN1 245 aa13.29□□□□□ -0.28
LRP3-202ENST00000590275 FAM19A3Q7Z5A8 133 aa13.29□□□□□ -0.28
LRP3-202ENST00000590275 HMCN2Q8NDA2 5059 aa13.29□□□□□ -0.28
LRP3-202ENST00000590275 C2orf82Q6UX34 121 aa13.28□□□□□ -0.28
LRP3-202ENST00000590275 C7orf33Q8WU49 177 aa13.28□□□□□ -0.28
LRP3-202ENST00000590275 NPSP0C0P6 89 aa13.27□□□□□ -0.29
LRP3-202ENST00000590275 MT1HL1P0DM35 61 aa13.27□□□□□ -0.29
LRP3-202ENST00000590275 RPL18AQ02543 176 aaKnown RBP13.27□□□□□ -0.29
LRP3-202ENST00000590275 FABP9Q0Z7S8 132 aa13.27□□□□□ -0.29
LRP3-202ENST00000590275 TIMM17AQ99595 171 aa13.27□□□□□ -0.29
LRP3-202ENST00000590275 TNXBP22105 4242 aa13.26□□□□□ -0.29
LRP3-202ENST00000590275 NDUFA1O15239 70 aa13.26□□□□□ -0.29
LRP3-202ENST00000590275 APOC3P02656 99 aa13.26□□□□□ -0.29
LRP3-202ENST00000590275 C9orf116Q5BN46 136 aaPredicted RBP13.26□□□□□ -0.29
LRP3-202ENST00000590275 Q6ZN92 141 aa13.26□□□□□ -0.29
LRP3-202ENST00000590275 Q6ZRP5 223 aa13.26□□□□□ -0.29
LRP3-202ENST00000590275 URB1-AS1Q96HZ7 61 aa13.26□□□□□ -0.29
LRP3-202ENST00000590275 C2orf88Q9BSF0 95 aa13.26□□□□□ -0.29
LRP3-202ENST00000590275 PKIGQ9Y2B9 76 aa13.25□□□□□ -0.29
LRP3-202ENST00000590275 FAM168BA1KXE4 195 aa13.24□□□□□ -0.29
LRP3-202ENST00000590275 F8WDY8 70 aa13.24□□□□□ -0.29
LRP3-202ENST00000590275 ERASQ7Z444 233 aa13.24□□□□□ -0.29
LRP3-202ENST00000590275 KRTAP7-1Q8IUC3 87 aa13.24□□□□□ -0.29
LRP3-202ENST00000590275 LINC01561Q8N1V8 128 aa13.24□□□□□ -0.29
LRP3-202ENST00000590275 CDKN2A-AS1Q9UH64 79 aa13.24□□□□□ -0.29
LRP3-202ENST00000590275 MT-ND6P03923 174 aa13.23□□□□□ -0.29
LRP3-202ENST00000590275 TLX1NBP0CAT3 122 aa13.23□□□□□ -0.29
LRP3-202ENST00000590275 COX19Q49B96 90 aa13.23□□□□□ -0.29
LRP3-202ENST00000590275 YPEL4Q96NS1 127 aa13.23□□□□□ -0.29
LRP3-202ENST00000590275 SCGB3A1Q96QR1 104 aa13.23□□□□□ -0.29
LRP3-202ENST00000590275 A0A096LNJ9 63 aa13.22□□□□□ -0.29
LRP3-202ENST00000590275 PHF5AQ7RTV0 110 aaKnown RBP13.22□□□□□ -0.29
LRP3-202ENST00000590275 KRTAP11-1Q8IUC1 163 aa13.21□□□□□ -0.29
LRP3-202ENST00000590275 C18orf32Q8TCD1 76 aa13.19□□□□□ -0.3
LRP3-202ENST00000590275 TRAPPC1Q9Y5R8 145 aa13.19□□□□□ -0.3
LRP3-202ENST00000590275 G0S2P27469 103 aa13.18□□□□□ -0.3
LRP3-202ENST00000590275 SRSF9Q13242 221 aaKnown RBP eCLIP13.18□□□□□ -0.3
LRP3-202ENST00000590275 GAGE2EQ4V326 116 aa13.18□□□□□ -0.3
LRP3-202ENST00000590275 FA2HQ7L5A8 372 aa13.18□□□□□ -0.3
LRP3-202ENST00000590275 CST9LQ9H4G1 147 aa13.18□□□□□ -0.3
LRP3-202ENST00000590275 TOMM7Q9P0U1 55 aa13.18□□□□□ -0.3
LRP3-202ENST00000590275 GAGE2DQ9UEU5 116 aa13.18□□□□□ -0.3
LRP3-202ENST00000590275 HERVK_113P63121 156 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms