RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 CARD19Q96LW7 228 aa13.13□□□□□ -0.31
MBD3-205ENST00000589064 PRSS47A8MTI9 375 aa13.12□□□□□ -0.31
MBD3-205ENST00000589064 IGLV4-69A0A075B6H9 119 aa13.11□□□□□ -0.31
MBD3-205ENST00000589064 TRAV9-1A0A075B6T8 112 aa13.11□□□□□ -0.31
MBD3-205ENST00000589064 A0A096LNI7 61 aa13.11□□□□□ -0.31
MBD3-205ENST00000589064 HNRNPA3P51991 378 aaKnown RBP13.11□□□□□ -0.31
MBD3-205ENST00000589064 MRPS36P82909 103 aaKnown RBP13.11□□□□□ -0.31
MBD3-205ENST00000589064 LAMTOR2Q9Y2Q5 125 aa13.11□□□□□ -0.31
MBD3-205ENST00000589064 MAP1LC3AQ9H492 121 aa13.1□□□□□ -0.31
MBD3-205ENST00000589064 STPG4Q8N801 248 aa13.1□□□□□ -0.31
MBD3-205ENST00000589064 IFITM10A6NMD0 228 aa13.08□□□□□ -0.32
MBD3-205ENST00000589064 IFI27P40305 119 aaPredicted RBP13.08□□□□□ -0.32
MBD3-205ENST00000589064 Q6ZRU5 148 aa13.08□□□□□ -0.32
MBD3-205ENST00000589064 Q8N8P6 123 aa13.08□□□□□ -0.32
MBD3-205ENST00000589064 APOMO95445 188 aa13.07□□□□□ -0.32
MBD3-205ENST00000589064 CAMK2N2Q96S95 79 aa13.07□□□□□ -0.32
MBD3-205ENST00000589064 PYGO1Q9Y3Y4 419 aa13.07□□□□□ -0.32
MBD3-205ENST00000589064 LINC00474Q9P2X8 69 aa13.06□□□□□ -0.32
MBD3-205ENST00000589064 PKIGQ9Y2B9 76 aa13.06□□□□□ -0.32
MBD3-205ENST00000589064 IGHV3OR16-9A0A0B4J2B5 98 aa13.05□□□□□ -0.32
MBD3-205ENST00000589064 C2orf48Q96LS8 159 aa13.05□□□□□ -0.32
MBD3-205ENST00000589064 IGLV4-3A0A075B6K6 122 aa13.04□□□□□ -0.32
MBD3-205ENST00000589064 C7orf33Q8WU49 177 aa13.04□□□□□ -0.32
MBD3-205ENST00000589064 TGIF2-C20orf24A0A0A6YYL0 155 aa13.04□□□□□ -0.32
MBD3-205ENST00000589064 OXTP01178 125 aa13.04□□□□□ -0.32
MBD3-205ENST00000589064 SPAG11BQ08648 103 aa13.04□□□□□ -0.32
MBD3-205ENST00000589064 KIAA1644Q3SXP7 199 aa13.04□□□□□ -0.32
MBD3-205ENST00000589064 LRP1Q07954 4544 aaKnown RBP13.03□□□□□ -0.32
MBD3-205ENST00000589064 LOC107984640A0A0U1RRK4 108 aa13.03□□□□□ -0.32
MBD3-205ENST00000589064 GAGE2BQ13066 116 aa13.03□□□□□ -0.32
MBD3-205ENST00000589064 C2orf66Q6UXQ4 117 aa13.03□□□□□ -0.32
MBD3-205ENST00000589064 ORAOV1Q8WV07 137 aa13.03□□□□□ -0.32
MBD3-205ENST00000589064 TMEM141Q96I45 108 aa13.03□□□□□ -0.32
MBD3-205ENST00000589064 CYSLTR1Q9Y271 337 aa13.03□□□□□ -0.32
MBD3-205ENST00000589064 OR10D4PQ8NGN7 298 aa13.02□□□□□ -0.33
MBD3-205ENST00000589064 PTTG1IPP53801 180 aa13.01□□□□□ -0.33
MBD3-205ENST00000589064 ORMDL2Q53FV1 153 aa13.01□□□□□ -0.33
MBD3-205ENST00000589064 CBLN2Q8IUK8 224 aa13.01□□□□□ -0.33
MBD3-205ENST00000589064 GNB1LQ9BYB4 327 aa13.01□□□□□ -0.33
MBD3-205ENST00000589064 PKHD1L1Q86WI1 4243 aa13.01□□□□□ -0.33
MBD3-205ENST00000589064 A0A0J9YXV3 536 aa13□□□□□ -0.33
MBD3-205ENST00000589064 LINC00242Q5T6M2 205 aa13□□□□□ -0.33
MBD3-205ENST00000589064 ZC2HC1BQ5TFG8 222 aa13□□□□□ -0.33
MBD3-205ENST00000589064 YPEL4Q96NS1 127 aa13□□□□□ -0.33
MBD3-205ENST00000589064 NXT2Q9NPJ8 142 aaKnown RBP13□□□□□ -0.33
MBD3-205ENST00000589064 SMCO4Q9NRQ5 59 aa13□□□□□ -0.33
MBD3-205ENST00000589064 COX19Q49B96 90 aa12.99□□□□□ -0.33
MBD3-205ENST00000589064 TEX43Q6ZNM6 134 aa12.99□□□□□ -0.33
MBD3-205ENST00000589064 FAT3Q8TDW7 4589 aa12.99□□□□□ -0.33
MBD3-205ENST00000589064 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.98□□□□□ -0.33
MBD3-205ENST00000589064 K7EMI3 77 aa12.97□□□□□ -0.33
MBD3-205ENST00000589064 VCX2Q9H322 139 aa12.97□□□□□ -0.33
MBD3-205ENST00000589064 A0A087WZ39 114 aa12.97□□□□□ -0.33
MBD3-205ENST00000589064 UBE2D1P51668 147 aa12.97□□□□□ -0.33
MBD3-205ENST00000589064 RNF151Q2KHN1 245 aa12.97□□□□□ -0.33
MBD3-205ENST00000589064 Q6ZN92 141 aa12.97□□□□□ -0.33
MBD3-205ENST00000589064 IGIPA6NJ69 53 aa12.96□□□□□ -0.34
MBD3-205ENST00000589064 MT-ND6P03923 174 aa12.96□□□□□ -0.34
MBD3-205ENST00000589064 RPL18AQ02543 176 aaKnown RBP12.96□□□□□ -0.34
MBD3-205ENST00000589064 C10orf25Q5T742 122 aa12.96□□□□□ -0.34
MBD3-205ENST00000589064 LINC00173Q6ZV60 143 aa12.96□□□□□ -0.34
MBD3-205ENST00000589064 AMELXQ99217 191 aa12.96□□□□□ -0.34
MBD3-205ENST00000589064 A0A1W2PNN7 141 aa12.95□□□□□ -0.34
MBD3-205ENST00000589064 F8WDY8 70 aa12.95□□□□□ -0.34
MBD3-205ENST00000589064 UNQ6190/PRO20217Q6UXQ8 127 aa12.95□□□□□ -0.34
MBD3-205ENST00000589064 C2orf88Q9BSF0 95 aa12.95□□□□□ -0.34
MBD3-205ENST00000589064 MRPL18Q9H0U6 180 aaKnown RBP12.95□□□□□ -0.34
MBD3-205ENST00000589064 MRPL35Q9NZE8 188 aaKnown RBP12.95□□□□□ -0.34
MBD3-205ENST00000589064 NDUFA1O15239 70 aa12.94□□□□□ -0.34
MBD3-205ENST00000589064 PRR3P79522 188 aaKnown RBP12.94□□□□□ -0.34
MBD3-205ENST00000589064 FABP9Q0Z7S8 132 aa12.93□□□□□ -0.34
MBD3-205ENST00000589064 KIAA0087Q14695 138 aa12.93□□□□□ -0.34
MBD3-205ENST00000589064 TRAPPC1Q9Y5R8 145 aa12.93□□□□□ -0.34
MBD3-205ENST00000589064 ATP6V1G1O75348 118 aa12.92□□□□□ -0.34
MBD3-205ENST00000589064 SCO1O75880 301 aa12.92□□□□□ -0.34
MBD3-205ENST00000589064 NPSP0C0P6 89 aa12.92□□□□□ -0.34
MBD3-205ENST00000589064 G0S2P27469 103 aa12.92□□□□□ -0.34
MBD3-205ENST00000589064 C9orf116Q5BN46 136 aaPredicted RBP12.91□□□□□ -0.34
MBD3-205ENST00000589064 TOMM6Q96B49 74 aa12.91□□□□□ -0.34
MBD3-205ENST00000589064 ALKBH7Q9BT30 221 aaPredicted RBP12.91□□□□□ -0.34
MBD3-205ENST00000589064 C6orf48Q9UBA6 75 aa12.91□□□□□ -0.34
MBD3-205ENST00000589064 S100A1P23297 94 aa12.9□□□□□ -0.34
MBD3-205ENST00000589064 LINC01561Q8N1V8 128 aa12.9□□□□□ -0.34
MBD3-205ENST00000589064 PAPPA-AS1Q5QFB9 102 aa12.89□□□□□ -0.35
MBD3-205ENST00000589064 C2orf82Q6UX34 121 aa12.89□□□□□ -0.35
MBD3-205ENST00000589064 TIMM17AQ99595 171 aa12.89□□□□□ -0.35
MBD3-205ENST00000589064 Q6ZRP5 223 aa12.88□□□□□ -0.35
MBD3-205ENST00000589064 FAM19A3Q7Z5A8 133 aa12.88□□□□□ -0.35
MBD3-205ENST00000589064 SCGB3A1Q96QR1 104 aa12.88□□□□□ -0.35
MBD3-205ENST00000589064 COLCA2A8K830 154 aa12.86□□□□□ -0.35
MBD3-205ENST00000589064 ERASQ7Z444 233 aa12.86□□□□□ -0.35
MBD3-205ENST00000589064 LINC01546A6NGU7 62 aa12.85□□□□□ -0.35
MBD3-205ENST00000589064 TLX1NBP0CAT3 122 aa12.85□□□□□ -0.35
MBD3-205ENST00000589064 MT1HL1P0DM35 61 aa12.85□□□□□ -0.35
MBD3-205ENST00000589064 GAGE2EQ4V326 116 aa12.85□□□□□ -0.35
MBD3-205ENST00000589064 GAGE2DQ9UEU5 116 aa12.85□□□□□ -0.35
MBD3-205ENST00000589064 SERTAD4-AS1Q5TG53 156 aa12.85□□□□□ -0.35
MBD3-205ENST00000589064 PHF5AQ7RTV0 110 aaKnown RBP12.85□□□□□ -0.35
MBD3-205ENST00000589064 TOMM7Q9P0U1 55 aa12.85□□□□□ -0.35
MBD3-205ENST00000589064 HERVK_113P63121 156 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms