RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 IFI27P40305 119 aaPredicted RBP11.16□□□□□ -0.62
TPM4-206ENST00000587201 UQCC3Q6UW78 93 aa11.16□□□□□ -0.62
TPM4-206ENST00000587201 Q6ZRU5 148 aa11.16□□□□□ -0.62
TPM4-206ENST00000587201 CAMK2N2Q96S95 79 aa11.16□□□□□ -0.62
TPM4-206ENST00000587201 FAT3Q8TDW7 4589 aa11.15□□□□□ -0.62
TPM4-206ENST00000587201 ADCYAP1P18509 176 aa11.14□□□□□ -0.63
TPM4-206ENST00000587201 SPAG11BQ08648 103 aa11.14□□□□□ -0.63
TPM4-206ENST00000587201 C2orf48Q96LS8 159 aa11.14□□□□□ -0.63
TPM4-206ENST00000587201 LOC107984640A0A0U1RRK4 108 aa11.13□□□□□ -0.63
TPM4-206ENST00000587201 TMEM218A2RU14 115 aa11.13□□□□□ -0.63
TPM4-206ENST00000587201 Q8N8P6 123 aa11.13□□□□□ -0.63
TPM4-206ENST00000587201 IMMP2LQ96T52 175 aa11.13□□□□□ -0.63
TPM4-206ENST00000587201 CTDSP1Q9GZU7 261 aa11.13□□□□□ -0.63
TPM4-206ENST00000587201 PYGO1Q9Y3Y4 419 aa11.13□□□□□ -0.63
TPM4-206ENST00000587201 IGHV3OR16-9A0A0B4J2B5 98 aa11.12□□□□□ -0.63
TPM4-206ENST00000587201 GAGE2BQ13066 116 aa11.12□□□□□ -0.63
TPM4-206ENST00000587201 OR10D4PQ8NGN7 298 aa11.12□□□□□ -0.63
TPM4-206ENST00000587201 ORAOV1Q8WV07 137 aa11.12□□□□□ -0.63
TPM4-206ENST00000587201 IGLV4-3A0A075B6K6 122 aa11.11□□□□□ -0.63
TPM4-206ENST00000587201 PTTG1IPP53801 180 aa11.11□□□□□ -0.63
TPM4-206ENST00000587201 TMEM141Q96I45 108 aa11.11□□□□□ -0.63
TPM4-206ENST00000587201 TGIF2-C20orf24A0A0A6YYL0 155 aa11.1□□□□□ -0.63
TPM4-206ENST00000587201 C2orf66Q6UXQ4 117 aa11.1□□□□□ -0.63
TPM4-206ENST00000587201 CYSLTR1Q9Y271 337 aa11.1□□□□□ -0.63
TPM4-206ENST00000587201 ORMDL2Q53FV1 153 aa11.09□□□□□ -0.63
TPM4-206ENST00000587201 TEX43Q6ZNM6 134 aa11.09□□□□□ -0.63
TPM4-206ENST00000587201 A0A0J9YXV3 536 aa11.08□□□□□ -0.64
TPM4-206ENST00000587201 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.08□□□□□ -0.64
TPM4-206ENST00000587201 RPL18AQ02543 176 aaKnown RBP11.08□□□□□ -0.64
TPM4-206ENST00000587201 SEC11CQ9BY50 192 aa11.08□□□□□ -0.64
TPM4-206ENST00000587201 NXT2Q9NPJ8 142 aaKnown RBP11.08□□□□□ -0.64
TPM4-206ENST00000587201 K7EMI3 77 aa11.07□□□□□ -0.64
TPM4-206ENST00000587201 PRR3P79522 188 aaKnown RBP11.07□□□□□ -0.64
TPM4-206ENST00000587201 KIAA1644Q3SXP7 199 aa11.07□□□□□ -0.64
TPM4-206ENST00000587201 LINC00242Q5T6M2 205 aa11.07□□□□□ -0.64
TPM4-206ENST00000587201 Q6ZN92 141 aa11.07□□□□□ -0.64
TPM4-206ENST00000587201 C2orf88Q9BSF0 95 aa11.07□□□□□ -0.64
TPM4-206ENST00000587201 TRAV9-1A0A075B6T8 112 aa11.06□□□□□ -0.64
TPM4-206ENST00000587201 F8WDY8 70 aa11.06□□□□□ -0.64
TPM4-206ENST00000587201 NDUFA1O15239 70 aa11.06□□□□□ -0.64
TPM4-206ENST00000587201 S100PP25815 95 aa11.06□□□□□ -0.64
TPM4-206ENST00000587201 RNF151Q2KHN1 245 aa11.06□□□□□ -0.64
TPM4-206ENST00000587201 COMMD7Q86VX2 200 aa11.06□□□□□ -0.64
TPM4-206ENST00000587201 MRPL35Q9NZE8 188 aaKnown RBP11.06□□□□□ -0.64
TPM4-206ENST00000587201 A0A087WZ39 114 aa11.05□□□□□ -0.64
TPM4-206ENST00000587201 VCX2Q9H322 139 aa11.05□□□□□ -0.64
TPM4-206ENST00000587201 A0A1W2PNN7 141 aa11.04□□□□□ -0.64
TPM4-206ENST00000587201 UBE2D1P51668 147 aa11.04□□□□□ -0.64
TPM4-206ENST00000587201 ZC2HC1BQ5TFG8 222 aa11.04□□□□□ -0.64
TPM4-206ENST00000587201 C10orf25Q5T742 122 aa11.03□□□□□ -0.64
TPM4-206ENST00000587201 SERTAD4-AS1Q5TG53 156 aa11.03□□□□□ -0.64
TPM4-206ENST00000587201 UNQ6190/PRO20217Q6UXQ8 127 aa11.03□□□□□ -0.64
TPM4-206ENST00000587201 AMELXQ99217 191 aa11.03□□□□□ -0.64
TPM4-206ENST00000587201 IGIPA6NJ69 53 aa11.02□□□□□ -0.65
TPM4-206ENST00000587201 NPSP0C0P6 89 aa11.02□□□□□ -0.65
TPM4-206ENST00000587201 G0S2P27469 103 aa11.02□□□□□ -0.65
TPM4-206ENST00000587201 C9orf116Q5BN46 136 aaPredicted RBP11.02□□□□□ -0.65
TPM4-206ENST00000587201 LINC00173Q6ZV60 143 aa11.02□□□□□ -0.65
TPM4-206ENST00000587201 GNB1LQ9BYB4 327 aa11.02□□□□□ -0.65
TPM4-206ENST00000587201 KIAA0087Q14695 138 aa11.01□□□□□ -0.65
TPM4-206ENST00000587201 Q6ZRP5 223 aa11.01□□□□□ -0.65
TPM4-206ENST00000587201 C6orf48Q9UBA6 75 aa11.01□□□□□ -0.65
TPM4-206ENST00000587201 LINC01561Q8N1V8 128 aa11□□□□□ -0.65
TPM4-206ENST00000587201 PAPPA-AS1Q5QFB9 102 aa10.99□□□□□ -0.65
TPM4-206ENST00000587201 TOMM6Q96B49 74 aa10.99□□□□□ -0.65
TPM4-206ENST00000587201 TIMM17AQ99595 171 aa10.99□□□□□ -0.65
TPM4-206ENST00000587201 RPS10P5Q9NQ39 176 aa10.99□□□□□ -0.65
TPM4-206ENST00000587201 TLX1NBP0CAT3 122 aa10.98□□□□□ -0.65
TPM4-206ENST00000587201 MT1HL1P0DM35 61 aa10.98□□□□□ -0.65
TPM4-206ENST00000587201 COX19Q49B96 90 aa10.98□□□□□ -0.65
TPM4-206ENST00000587201 C10orf91Q5T1B1 145 aa10.98□□□□□ -0.65
TPM4-206ENST00000587201 RHEBQ15382 184 aa10.97□□□□□ -0.65
TPM4-206ENST00000587201 GAGE2EQ4V326 116 aa10.97□□□□□ -0.65
TPM4-206ENST00000587201 PHF5AQ7RTV0 110 aaKnown RBP10.97□□□□□ -0.65
TPM4-206ENST00000587201 FAM19A3Q7Z5A8 133 aa10.97□□□□□ -0.65
TPM4-206ENST00000587201 ALKBH7Q9BT30 221 aaPredicted RBP10.97□□□□□ -0.65
TPM4-206ENST00000587201 GAGE2DQ9UEU5 116 aa10.97□□□□□ -0.65
TPM4-206ENST00000587201 CARHSP1Q9Y2V2 147 aaKnown RBP10.97□□□□□ -0.65
TPM4-206ENST00000587201 TRBV30A0A0K0K1B3 111 aa10.96□□□□□ -0.65
TPM4-206ENST00000587201 PRSS2P07478 247 aa10.96□□□□□ -0.65
TPM4-206ENST00000587201 HERVK_113P63121 156 aa10.96□□□□□ -0.65
TPM4-206ENST00000587201 SEC11AP67812 179 aa10.96□□□□□ -0.65
TPM4-206ENST00000587201 SPINK6Q6UWN8 80 aa10.96□□□□□ -0.65
TPM4-206ENST00000587201 C2orf82Q6UX34 121 aa10.96□□□□□ -0.65
TPM4-206ENST00000587201 PACRGQ96M98 296 aaPredicted RBP10.96□□□□□ -0.65
TPM4-206ENST00000587201 SCGB3A1Q96QR1 104 aa10.96□□□□□ -0.65
TPM4-206ENST00000587201 MRPL18Q9H0U6 180 aaKnown RBP10.96□□□□□ -0.65
TPM4-206ENST00000587201 TOMM7Q9P0U1 55 aa10.96□□□□□ -0.65
TPM4-206ENST00000587201 MT-ND6P03923 174 aa10.95□□□□□ -0.66
TPM4-206ENST00000587201 FABP9Q0Z7S8 132 aa10.95□□□□□ -0.66
TPM4-206ENST00000587201 ERASQ7Z444 233 aa10.95□□□□□ -0.66
TPM4-206ENST00000587201 GEMIN7Q9H840 131 aaKnown RBP10.94□□□□□ -0.66
TPM4-206ENST00000587201 FAM168BA1KXE4 195 aa10.93□□□□□ -0.66
TPM4-206ENST00000587201 C6orf226Q5I0X4 101 aa10.93□□□□□ -0.66
TPM4-206ENST00000587201 CDKN2A-AS1Q9UH64 79 aa10.93□□□□□ -0.66
TPM4-206ENST00000587201 PSORS1C2Q9UIG4 136 aa10.93□□□□□ -0.66
TPM4-206ENST00000587201 LINC01546A6NGU7 62 aa10.92□□□□□ -0.66
TPM4-206ENST00000587201 LINC01549A6NIU2 74 aa10.92□□□□□ -0.66
TPM4-206ENST00000587201 CKS1BP61024 79 aa10.92□□□□□ -0.66
TPM4-206ENST00000587201 SRSF9Q13242 221 aaKnown RBP eCLIP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms