RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 LRP1Q07954 4544 aaKnown RBP6.33□□□□□ -1.4
SKA2-208ENST00000583927 NPYP01303 97 aa6.32□□□□□ -1.4
SKA2-208ENST00000583927 XCL1P47992 114 aa6.32□□□□□ -1.4
SKA2-208ENST00000583927 SNRPEP62304 92 aaKnown RBP6.32□□□□□ -1.4
SKA2-208ENST00000583927 MRPS36P82909 103 aaKnown RBP6.32□□□□□ -1.4
SKA2-208ENST00000583927 TMEM136Q6ZRR5 245 aa6.32□□□□□ -1.4
SKA2-208ENST00000583927 SPANXA1Q9NS26 97 aa6.32□□□□□ -1.4
SKA2-208ENST00000583927 PKIGQ9Y2B9 76 aa6.32□□□□□ -1.4
SKA2-208ENST00000583927 PANO1I0J062 215 aa6.31□□□□□ -1.4
SKA2-208ENST00000583927 SPACA4Q8TDM5 124 aa6.31□□□□□ -1.4
SKA2-208ENST00000583927 PRELID3AQ96N28 172 aa6.31□□□□□ -1.4
SKA2-208ENST00000583927 PYGO1Q9Y3Y4 419 aa6.31□□□□□ -1.4
SKA2-208ENST00000583927 TRAV9-1A0A075B6T8 112 aa6.3□□□□□ -1.4
SKA2-208ENST00000583927 K7EMI3 77 aa6.3□□□□□ -1.4
SKA2-208ENST00000583927 HIGD2BQ4VC39 106 aa6.3□□□□□ -1.4
SKA2-208ENST00000583927 FAM104AQ969W3 186 aa6.3□□□□□ -1.4
SKA2-208ENST00000583927 CTDSP1Q9GZU7 261 aa6.3□□□□□ -1.4
SKA2-208ENST00000583927 PLAC8Q9NZF1 115 aa6.3□□□□□ -1.4
SKA2-208ENST00000583927 KRTAP29-1A8MX34 341 aaPredicted RBP6.29□□□□□ -1.4
SKA2-208ENST00000583927 RPL39P62891 51 aaKnown RBP6.29□□□□□ -1.4
SKA2-208ENST00000583927 FABP9Q0Z7S8 132 aa6.29□□□□□ -1.4
SKA2-208ENST00000583927 Q6ZUT4 128 aa6.29□□□□□ -1.4
SKA2-208ENST00000583927 C2orf88Q9BSF0 95 aa6.29□□□□□ -1.4
SKA2-208ENST00000583927 LINC00474Q9P2X8 69 aa6.29□□□□□ -1.4
SKA2-208ENST00000583927 A0A087WYN8 130 aa6.28□□□□□ -1.4
SKA2-208ENST00000583927 ZNF561-AS1K7EIQ3 104 aa6.28□□□□□ -1.4
SKA2-208ENST00000583927 COX7A2LO14548 114 aa6.28□□□□□ -1.4
SKA2-208ENST00000583927 NPSP0C0P6 89 aa6.28□□□□□ -1.4
SKA2-208ENST00000583927 RAB5AP20339 215 aa6.28□□□□□ -1.4
SKA2-208ENST00000583927 COX6A2Q02221 97 aa6.28□□□□□ -1.4
SKA2-208ENST00000583927 YPEL4Q96NS1 127 aa6.28□□□□□ -1.4
SKA2-208ENST00000583927 MAP1LC3AQ9H492 121 aa6.28□□□□□ -1.4
SKA2-208ENST00000583927 TRAV13-1A0A0B4J241 112 aa6.27□□□□□ -1.41
SKA2-208ENST00000583927 IGHV3OR16-9A0A0B4J2B5 98 aa6.27□□□□□ -1.41
SKA2-208ENST00000583927 F8WDY8 70 aa6.27□□□□□ -1.41
SKA2-208ENST00000583927 APOMO95445 188 aa6.27□□□□□ -1.41
SKA2-208ENST00000583927 RPL37AP61513 92 aaKnown RBP6.27□□□□□ -1.41
SKA2-208ENST00000583927 SYCNQ0VAF6 134 aa6.27□□□□□ -1.41
SKA2-208ENST00000583927 Q8N8P6 123 aa6.27□□□□□ -1.41
SKA2-208ENST00000583927 PRSS3P2Q8NHM4 247 aa6.27□□□□□ -1.41
SKA2-208ENST00000583927 C14orf144Q96I85 54 aa6.27□□□□□ -1.41
SKA2-208ENST00000583927 C2orf48Q96LS8 159 aa6.27□□□□□ -1.41
SKA2-208ENST00000583927 CARD19Q96LW7 228 aa6.27□□□□□ -1.41
SKA2-208ENST00000583927 IGLV4-69A0A075B6H9 119 aa6.26□□□□□ -1.41
SKA2-208ENST00000583927 OXTP01178 125 aa6.26□□□□□ -1.41
SKA2-208ENST00000583927 CHTF8P0CG12 524 aa6.26□□□□□ -1.41
SKA2-208ENST00000583927 MALP21145 153 aa6.26□□□□□ -1.41
SKA2-208ENST00000583927 IFI27P40305 119 aaPredicted RBP6.26□□□□□ -1.41
SKA2-208ENST00000583927 RHEBQ15382 184 aa6.26□□□□□ -1.41
SKA2-208ENST00000583927 RNF151Q2KHN1 245 aa6.26□□□□□ -1.41
SKA2-208ENST00000583927 ORMDL2Q53FV1 153 aa6.26□□□□□ -1.41
SKA2-208ENST00000583927 RNASE13Q5GAN3 156 aaKnown RBP6.26□□□□□ -1.41
SKA2-208ENST00000583927 OR10D4PQ8NGN7 298 aa6.26□□□□□ -1.41
SKA2-208ENST00000583927 IGLV4-3A0A075B6K6 122 aa6.25□□□□□ -1.41
SKA2-208ENST00000583927 G0S2P27469 103 aa6.25□□□□□ -1.41
SKA2-208ENST00000583927 COX19Q49B96 90 aa6.25□□□□□ -1.41
SKA2-208ENST00000583927 PYY3Q5JQD4 70 aa6.25□□□□□ -1.41
SKA2-208ENST00000583927 TMEM141Q96I45 108 aa6.25□□□□□ -1.41
SKA2-208ENST00000583927 NXT2Q9NPJ8 142 aaKnown RBP6.25□□□□□ -1.41
SKA2-208ENST00000583927 A0A096LNI7 61 aa6.24□□□□□ -1.41
SKA2-208ENST00000583927 IFITM10A6NMD0 228 aa6.24□□□□□ -1.41
SKA2-208ENST00000583927 MAJINQ3KP22 176 aa6.24□□□□□ -1.41
SKA2-208ENST00000583927 ANKRD39Q53RE8 183 aa6.24□□□□□ -1.41
SKA2-208ENST00000583927 C5orf38Q86SI9 138 aa6.24□□□□□ -1.41
SKA2-208ENST00000583927 LINC01561Q8N1V8 128 aa6.24□□□□□ -1.41
SKA2-208ENST00000583927 LINC00526Q96FQ7 95 aa6.24□□□□□ -1.41
SKA2-208ENST00000583927 DPH3Q96FX2 82 aa6.24□□□□□ -1.41
SKA2-208ENST00000583927 OPRPNQ99935 248 aaPredicted RBP6.24□□□□□ -1.41
SKA2-208ENST00000583927 GNB1LQ9BYB4 327 aa6.24□□□□□ -1.41
SKA2-208ENST00000583927 CYSLTR1Q9Y271 337 aa6.24□□□□□ -1.41
SKA2-208ENST00000583927 A0A087WZ39 114 aa6.23□□□□□ -1.41
SKA2-208ENST00000583927 IGKV2-24A0A0C4DH68 120 aa6.23□□□□□ -1.41
SKA2-208ENST00000583927 LOC107984640A0A0U1RRK4 108 aa6.23□□□□□ -1.41
SKA2-208ENST00000583927 LOC389332A0A1B0GUA5 103 aa6.23□□□□□ -1.41
SKA2-208ENST00000583927 C2orf66Q6UXQ4 117 aa6.23□□□□□ -1.41
SKA2-208ENST00000583927 Q6ZRU5 148 aa6.23□□□□□ -1.41
SKA2-208ENST00000583927 FAM19A3Q7Z5A8 133 aa6.23□□□□□ -1.41
SKA2-208ENST00000583927 STPG4Q8N801 248 aa6.23□□□□□ -1.41
SKA2-208ENST00000583927 C7orf33Q8WU49 177 aa6.23□□□□□ -1.41
SKA2-208ENST00000583927 CAMK2N2Q96S95 79 aa6.23□□□□□ -1.41
SKA2-208ENST00000583927 AMELXQ99217 191 aa6.23□□□□□ -1.41
SKA2-208ENST00000583927 MRPL35Q9NZE8 188 aaKnown RBP6.23□□□□□ -1.41
SKA2-208ENST00000583927 TGIF2-C20orf24A0A0A6YYL0 155 aa6.22□□□□□ -1.41
SKA2-208ENST00000583927 A0A1B0GV90 55 aa6.22□□□□□ -1.41
SKA2-208ENST00000583927 LINC01546A6NGU7 62 aa6.22□□□□□ -1.41
SKA2-208ENST00000583927 LINC01549A6NIU2 74 aa6.22□□□□□ -1.41
SKA2-208ENST00000583927 IGIPA6NJ69 53 aa6.22□□□□□ -1.41
SKA2-208ENST00000583927 DDTP30046 118 aa6.22□□□□□ -1.41
SKA2-208ENST00000583927 PTTG1IPP53801 180 aa6.22□□□□□ -1.41
SKA2-208ENST00000583927 SPAG11BQ08648 103 aa6.22□□□□□ -1.41
SKA2-208ENST00000583927 PAPPA-AS1Q5QFB9 102 aa6.22□□□□□ -1.41
SKA2-208ENST00000583927 LINC00242Q5T6M2 205 aa6.22□□□□□ -1.41
SKA2-208ENST00000583927 TEX43Q6ZNM6 134 aa6.22□□□□□ -1.41
SKA2-208ENST00000583927 TNXBP22105 4242 aa6.21□□□□□ -1.41
SKA2-208ENST00000583927 MT-ND6P03923 174 aa6.21□□□□□ -1.42
SKA2-208ENST00000583927 TLX1NBP0CAT3 122 aa6.21□□□□□ -1.42
SKA2-208ENST00000583927 S100A2P29034 98 aa6.21□□□□□ -1.42
SKA2-208ENST00000583927 UBE2D1P51668 147 aa6.21□□□□□ -1.42
SKA2-208ENST00000583927 HNRNPA3P51991 378 aaKnown RBP6.21□□□□□ -1.42
SKA2-208ENST00000583927 Q6ZN92 141 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 244.9 ms