RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 TRBV6-5A0A0K0K1A5 114 aa5.99□□□□□ -1.45
CTDNEP1-202ENST00000570380 F8WDY8 70 aa5.99□□□□□ -1.45
CTDNEP1-202ENST00000570380 TAGLN2P37802 199 aaKnown RBP5.99□□□□□ -1.45
CTDNEP1-202ENST00000570380 GNG4P50150 75 aa5.99□□□□□ -1.45
CTDNEP1-202ENST00000570380 TMEM241Q24JQ0 296 aa5.99□□□□□ -1.45
CTDNEP1-202ENST00000570380 LCE2CQ5TA81 110 aa5.99□□□□□ -1.45
CTDNEP1-202ENST00000570380 LINC00304Q8N9R0 145 aa5.99□□□□□ -1.45
CTDNEP1-202ENST00000570380 ORAOV1Q8WV07 137 aa5.99□□□□□ -1.45
CTDNEP1-202ENST00000570380 RNASE7Q9H1E1 156 aaKnown RBP5.99□□□□□ -1.45
CTDNEP1-202ENST00000570380 C7orf77A4D0Y5 90 aa5.98□□□□□ -1.45
CTDNEP1-202ENST00000570380 K7EN84 100 aa5.98□□□□□ -1.45
CTDNEP1-202ENST00000570380 NUPR1O60356 82 aa5.98□□□□□ -1.45
CTDNEP1-202ENST00000570380 CEBPGP53567 150 aa5.98□□□□□ -1.45
CTDNEP1-202ENST00000570380 CLLU1Q5K131 121 aa5.98□□□□□ -1.45
CTDNEP1-202ENST00000570380 C9orf129Q5T035 196 aaKnown RBP5.98□□□□□ -1.45
CTDNEP1-202ENST00000570380 FAM210AQ96ND0 272 aa5.98□□□□□ -1.45
CTDNEP1-202ENST00000570380 CTDSP1Q9GZU7 261 aa5.98□□□□□ -1.45
CTDNEP1-202ENST00000570380 TMEM250H0YL14 139 aa5.97□□□□□ -1.45
CTDNEP1-202ENST00000570380 SRP19P09132 144 aaKnown RBP5.97□□□□□ -1.45
CTDNEP1-202ENST00000570380 OCC1Q8TAD7 63 aa5.97□□□□□ -1.45
CTDNEP1-202ENST00000570380 EIF5A2Q9GZV4 153 aaKnown RBP5.97□□□□□ -1.45
CTDNEP1-202ENST00000570380 UBE2D4Q9Y2X8 147 aa5.97□□□□□ -1.45
CTDNEP1-202ENST00000570380 CSDC2Q9Y534 153 aaKnown RBP5.97□□□□□ -1.45
CTDNEP1-202ENST00000570380 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.96□□□□□ -1.46
CTDNEP1-202ENST00000570380 C9JQL5 133 aa5.96□□□□□ -1.46
CTDNEP1-202ENST00000570380 POLR2KP53803 58 aaKnown RBP5.96□□□□□ -1.46
CTDNEP1-202ENST00000570380 IFITM2Q01629 132 aa5.96□□□□□ -1.46
CTDNEP1-202ENST00000570380 SMIM12Q96EX1 92 aa5.96□□□□□ -1.46
CTDNEP1-202ENST00000570380 ST20Q9HBF5 79 aa5.96□□□□□ -1.46
CTDNEP1-202ENST00000570380 IGHV3OR16-9A0A0B4J2B5 98 aa5.95□□□□□ -1.46
CTDNEP1-202ENST00000570380 RPL28P46779 137 aaKnown RBP5.95□□□□□ -1.46
CTDNEP1-202ENST00000570380 LINC00242Q5T6M2 205 aa5.95□□□□□ -1.46
CTDNEP1-202ENST00000570380 Q6ZUT4 128 aa5.95□□□□□ -1.46
CTDNEP1-202ENST00000570380 COMMD7Q86VX2 200 aa5.95□□□□□ -1.46
CTDNEP1-202ENST00000570380 NUDT10Q8NFP7 164 aa5.95□□□□□ -1.46
CTDNEP1-202ENST00000570380 NUDT11Q96G61 164 aa5.95□□□□□ -1.46
CTDNEP1-202ENST00000570380 TRBV27A0A0K0K1C4 114 aa5.94□□□□□ -1.46
CTDNEP1-202ENST00000570380 NDUFC2-KCTD14E9PQ53 114 aa5.94□□□□□ -1.46
CTDNEP1-202ENST00000570380 KIAA0087Q14695 138 aa5.94□□□□□ -1.46
CTDNEP1-202ENST00000570380 SMIM15Q7Z3B0 74 aa5.94□□□□□ -1.46
CTDNEP1-202ENST00000570380 LINC00337Q8N6G1 96 aa5.94□□□□□ -1.46
CTDNEP1-202ENST00000570380 SMIM7Q9BQ49 75 aa5.94□□□□□ -1.46
CTDNEP1-202ENST00000570380 C22orf24Q9Y442 160 aa5.94□□□□□ -1.46
CTDNEP1-202ENST00000570380 LINC00862A6NCI5 91 aa5.93□□□□□ -1.46
CTDNEP1-202ENST00000570380 BCE1O60756 84 aa5.93□□□□□ -1.46
CTDNEP1-202ENST00000570380 CTAG1AP78358 180 aa5.93□□□□□ -1.46
CTDNEP1-202ENST00000570380 MT1HP80294 61 aa5.93□□□□□ -1.46
CTDNEP1-202ENST00000570380 KRTAP13-3Q3SY46 172 aa5.93□□□□□ -1.46
CTDNEP1-202ENST00000570380 ZNF727A8MUV8 499 aa5.92□□□□□ -1.46
CTDNEP1-202ENST00000570380 SEC61BP60468 96 aaKnown RBP5.92□□□□□ -1.46
CTDNEP1-202ENST00000570380 FAM229BQ4G0N7 80 aa5.92□□□□□ -1.46
CTDNEP1-202ENST00000570380 UQCC3Q6UW78 93 aa5.92□□□□□ -1.46
CTDNEP1-202ENST00000570380 LINC01551Q86U37 167 aa5.92□□□□□ -1.46
CTDNEP1-202ENST00000570380 BIN3Q9NQY0 253 aa5.92□□□□□ -1.46
CTDNEP1-202ENST00000570380 TRBV30A0A0K0K1B3 111 aa5.91□□□□□ -1.46
CTDNEP1-202ENST00000570380 TMEM238LA0A1B0GVL6 79 aa5.91□□□□□ -1.46
CTDNEP1-202ENST00000570380 GATCO43716 136 aaKnown RBP5.91□□□□□ -1.46
CTDNEP1-202ENST00000570380 LORP23490 312 aaPredicted RBP5.91□□□□□ -1.46
CTDNEP1-202ENST00000570380 SMAGPQ0VAQ4 97 aa5.91□□□□□ -1.46
CTDNEP1-202ENST00000570380 KRTAP19-2Q3LHN2 52 aa5.91□□□□□ -1.46
CTDNEP1-202ENST00000570380 LBHQ53QV2 105 aaPredicted RBP5.91□□□□□ -1.46
CTDNEP1-202ENST00000570380 C2orf82Q6UX34 121 aa5.91□□□□□ -1.46
CTDNEP1-202ENST00000570380 FAM231DQ6ZW35 169 aa5.91□□□□□ -1.46
CTDNEP1-202ENST00000570380 FAM104AQ969W3 186 aa5.91□□□□□ -1.46
CTDNEP1-202ENST00000570380 ANAPC16Q96DE5 110 aa5.91□□□□□ -1.46
CTDNEP1-202ENST00000570380 IGKV2D-26A0A0A0MRZ7 120 aa5.9□□□□□ -1.46
CTDNEP1-202ENST00000570380 CFC1BP0CG36 223 aa5.9□□□□□ -1.46
CTDNEP1-202ENST00000570380 FCER1GP30273 86 aa5.9□□□□□ -1.46
CTDNEP1-202ENST00000570380 RPL23P62829 140 aaKnown RBP5.9□□□□□ -1.46
CTDNEP1-202ENST00000570380 PEA15Q15121 130 aa5.9□□□□□ -1.46
CTDNEP1-202ENST00000570380 FP248Q71RG6 208 aaPredicted RBP5.9□□□□□ -1.46
CTDNEP1-202ENST00000570380 SLC7A5P1Q8MH63 180 aa5.9□□□□□ -1.46
CTDNEP1-202ENST00000570380 TIMM21Q9BVV7 248 aa5.9□□□□□ -1.46
CTDNEP1-202ENST00000570380 VCYO14598 125 aa5.89□□□□□ -1.47
CTDNEP1-202ENST00000570380 KRTAP10-6P60371 365 aaPredicted RBP5.89□□□□□ -1.47
CTDNEP1-202ENST00000570380 KRTAP13-1Q8IUC0 172 aa5.89□□□□□ -1.47
CTDNEP1-202ENST00000570380 LINC00469Q8N7U9 141 aa5.89□□□□□ -1.47
CTDNEP1-202ENST00000570380 PACRGQ96M98 296 aaPredicted RBP5.89□□□□□ -1.47
CTDNEP1-202ENST00000570380 ADIRFQ15847 76 aa5.88□□□□□ -1.47
CTDNEP1-202ENST00000570380 FAM74A3Q4VXF1 159 aa5.88□□□□□ -1.47
CTDNEP1-202ENST00000570380 MRPL55Q7Z7F7 128 aaKnown RBP5.88□□□□□ -1.47
CTDNEP1-202ENST00000570380 XAGE1AQ9HD64 81 aa5.88□□□□□ -1.47
CTDNEP1-202ENST00000570380 OSTCQ9NRP0 149 aa5.88□□□□□ -1.47
CTDNEP1-202ENST00000570380 NAT8Q9UHE5 227 aa5.88□□□□□ -1.47
CTDNEP1-202ENST00000570380 V9GYV3 84 aa5.88□□□□□ -1.47
CTDNEP1-202ENST00000570380 A8MWL6 223 aa5.87□□□□□ -1.47
CTDNEP1-202ENST00000570380 RAB4AP20338 218 aa5.87□□□□□ -1.47
CTDNEP1-202ENST00000570380 CT83Q5H943 113 aa5.87□□□□□ -1.47
CTDNEP1-202ENST00000570380 TP73-AS1Q9UF72 201 aa5.87□□□□□ -1.47
CTDNEP1-202ENST00000570380 RPL37AP8A6NKH3 93 aa5.86□□□□□ -1.47
CTDNEP1-202ENST00000570380 HIGD1CA8MV81 97 aa5.86□□□□□ -1.47
CTDNEP1-202ENST00000570380 SMKR1H3BMG3 65 aa5.86□□□□□ -1.47
CTDNEP1-202ENST00000570380 RPL39P62891 51 aaKnown RBP5.86□□□□□ -1.47
CTDNEP1-202ENST00000570380 LINC00167Q96N53 147 aa5.86□□□□□ -1.47
CTDNEP1-202ENST00000570380 SUMO2P61956 95 aaKnown RBP5.85□□□□□ -1.47
CTDNEP1-202ENST00000570380 AMN1Q8IY45 258 aa5.85□□□□□ -1.47
CTDNEP1-202ENST00000570380 SVBPQ8N300 66 aa5.85□□□□□ -1.47
CTDNEP1-202ENST00000570380 C3orf22Q8N5N4 141 aa5.85□□□□□ -1.47
CTDNEP1-202ENST00000570380 NRACQ8N912 160 aa5.85□□□□□ -1.47
CTDNEP1-202ENST00000570380 TMEM18Q96B42 140 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms