RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 IGHV3-64A0A075B6Q5 118 aa5.8□□□□□ -1.48
GTF3C1-210ENST00000569394 IGHV1-58A0A0C4DH39 117 aa5.8□□□□□ -1.48
GTF3C1-210ENST00000569394 C1orf196B1AJZ1 125 aa5.8□□□□□ -1.48
GTF3C1-210ENST00000569394 COX7A2LO14548 114 aa5.8□□□□□ -1.48
GTF3C1-210ENST00000569394 SNAPINO95295 136 aa5.8□□□□□ -1.48
GTF3C1-210ENST00000569394 INAFM2P0DMQ5 153 aa5.8□□□□□ -1.48
GTF3C1-210ENST00000569394 C2orf66Q6UXQ4 117 aa5.8□□□□□ -1.48
GTF3C1-210ENST00000569394 CHAC1Q9BUX1 264 aa5.8□□□□□ -1.48
GTF3C1-210ENST00000569394 SPANXA1Q9NS26 97 aa5.8□□□□□ -1.48
GTF3C1-210ENST00000569394 IGLV4-69A0A075B6H9 119 aa5.79□□□□□ -1.48
GTF3C1-210ENST00000569394 IGLV4-3A0A075B6K6 122 aa5.79□□□□□ -1.48
GTF3C1-210ENST00000569394 TRAV9-1A0A075B6T8 112 aa5.79□□□□□ -1.48
GTF3C1-210ENST00000569394 SDIM1Q6ZPB5 146 aa5.79□□□□□ -1.48
GTF3C1-210ENST00000569394 Q6ZSA8 131 aa5.79□□□□□ -1.48
GTF3C1-210ENST00000569394 SVBPQ8N300 66 aa5.79□□□□□ -1.48
GTF3C1-210ENST00000569394 TIMM21Q9BVV7 248 aa5.79□□□□□ -1.48
GTF3C1-210ENST00000569394 GNB1LQ9BYB4 327 aa5.79□□□□□ -1.48
GTF3C1-210ENST00000569394 CYSLTR1Q9Y271 337 aa5.79□□□□□ -1.48
GTF3C1-210ENST00000569394 LAMTOR2Q9Y2Q5 125 aa5.79□□□□□ -1.48
GTF3C1-210ENST00000569394 CSDC2Q9Y534 153 aaKnown RBP5.79□□□□□ -1.48
GTF3C1-210ENST00000569394 TRAPPC1Q9Y5R8 145 aa5.79□□□□□ -1.48
GTF3C1-210ENST00000569394 GVQW2A0A096LPI5 108 aaPredicted RBP5.78□□□□□ -1.48
GTF3C1-210ENST00000569394 A0A0J9YXV3 536 aa5.78□□□□□ -1.48
GTF3C1-210ENST00000569394 PRSS47A8MTI9 375 aa5.78□□□□□ -1.48
GTF3C1-210ENST00000569394 CNBPP62633 177 aaKnown RBP5.78□□□□□ -1.48
GTF3C1-210ENST00000569394 MAJINQ3KP22 176 aa5.78□□□□□ -1.48
GTF3C1-210ENST00000569394 ORMDL2Q53FV1 153 aa5.78□□□□□ -1.48
GTF3C1-210ENST00000569394 ORAOV1Q8WV07 137 aa5.78□□□□□ -1.48
GTF3C1-210ENST00000569394 TMEM141Q96I45 108 aa5.78□□□□□ -1.48
GTF3C1-210ENST00000569394 ALKBH7Q9BT30 221 aaPredicted RBP5.78□□□□□ -1.48
GTF3C1-210ENST00000569394 NXT2Q9NPJ8 142 aaKnown RBP5.78□□□□□ -1.48
GTF3C1-210ENST00000569394 SMCO4Q9NRQ5 59 aa5.78□□□□□ -1.48
GTF3C1-210ENST00000569394 MRPS36P82909 103 aaKnown RBP5.77□□□□□ -1.49
GTF3C1-210ENST00000569394 GAGE2BQ13066 116 aa5.77□□□□□ -1.49
GTF3C1-210ENST00000569394 Q6ZN92 141 aa5.77□□□□□ -1.49
GTF3C1-210ENST00000569394 TEX43Q6ZNM6 134 aa5.77□□□□□ -1.49
GTF3C1-210ENST00000569394 FA2HQ7L5A8 372 aa5.77□□□□□ -1.49
GTF3C1-210ENST00000569394 CARD19Q96LW7 228 aa5.77□□□□□ -1.49
GTF3C1-210ENST00000569394 CAMK2N2Q96S95 79 aa5.77□□□□□ -1.49
GTF3C1-210ENST00000569394 VCX2Q9H322 139 aa5.77□□□□□ -1.49
GTF3C1-210ENST00000569394 A0A096LNI7 61 aa5.76□□□□□ -1.49
GTF3C1-210ENST00000569394 APOMO95445 188 aa5.76□□□□□ -1.49
GTF3C1-210ENST00000569394 SPAG11BQ08648 103 aa5.76□□□□□ -1.49
GTF3C1-210ENST00000569394 SYCNQ0VAF6 134 aa5.76□□□□□ -1.49
GTF3C1-210ENST00000569394 PMCHL1Q16048 86 aa5.76□□□□□ -1.49
GTF3C1-210ENST00000569394 Q6ZRU5 148 aa5.76□□□□□ -1.49
GTF3C1-210ENST00000569394 CBLN2Q8IUK8 224 aa5.76□□□□□ -1.49
GTF3C1-210ENST00000569394 SCGB3A1Q96QR1 104 aa5.76□□□□□ -1.49
GTF3C1-210ENST00000569394 C2orf88Q9BSF0 95 aa5.76□□□□□ -1.49
GTF3C1-210ENST00000569394 A0A087WYN8 130 aa5.75□□□□□ -1.49
GTF3C1-210ENST00000569394 MT-ND6P03923 174 aa5.75□□□□□ -1.49
GTF3C1-210ENST00000569394 UBE2D1P51668 147 aa5.75□□□□□ -1.49
GTF3C1-210ENST00000569394 NDUFA6P56556 154 aa5.75□□□□□ -1.49
GTF3C1-210ENST00000569394 LINC00242Q5T6M2 205 aa5.75□□□□□ -1.49
GTF3C1-210ENST00000569394 LINC00173Q6ZV60 143 aa5.75□□□□□ -1.49
GTF3C1-210ENST00000569394 TOMM7Q9P0U1 55 aa5.75□□□□□ -1.49
GTF3C1-210ENST00000569394 PYGO1Q9Y3Y4 419 aa5.75□□□□□ -1.49
GTF3C1-210ENST00000569394 IGHV3OR16-9A0A0B4J2B5 98 aa5.74□□□□□ -1.49
GTF3C1-210ENST00000569394 IGIPA6NJ69 53 aa5.74□□□□□ -1.49
GTF3C1-210ENST00000569394 RPL18AQ02543 176 aaKnown RBP5.74□□□□□ -1.49
GTF3C1-210ENST00000569394 RNF151Q2KHN1 245 aa5.74□□□□□ -1.49
GTF3C1-210ENST00000569394 COX19Q49B96 90 aa5.74□□□□□ -1.49
GTF3C1-210ENST00000569394 STPG4Q8N801 248 aa5.74□□□□□ -1.49
GTF3C1-210ENST00000569394 TOMM6Q96B49 74 aa5.74□□□□□ -1.49
GTF3C1-210ENST00000569394 RPL37AP61513 92 aaKnown RBP5.73□□□□□ -1.49
GTF3C1-210ENST00000569394 C10orf25Q5T742 122 aa5.73□□□□□ -1.49
GTF3C1-210ENST00000569394 C2orf82Q6UX34 121 aa5.73□□□□□ -1.49
GTF3C1-210ENST00000569394 C18orf32Q8TCD1 76 aa5.73□□□□□ -1.49
GTF3C1-210ENST00000569394 SPACA4Q8TDM5 124 aa5.73□□□□□ -1.49
GTF3C1-210ENST00000569394 K7EMI3 77 aa5.72□□□□□ -1.49
GTF3C1-210ENST00000569394 UNQ6190/PRO20217Q6UXQ8 127 aa5.72□□□□□ -1.49
GTF3C1-210ENST00000569394 ERASQ7Z444 233 aa5.72□□□□□ -1.49
GTF3C1-210ENST00000569394 URB1-AS1Q96HZ7 61 aa5.72□□□□□ -1.49
GTF3C1-210ENST00000569394 AMELXQ99217 191 aa5.72□□□□□ -1.49
GTF3C1-210ENST00000569394 GEMIN7Q9H840 131 aaKnown RBP5.72□□□□□ -1.49
GTF3C1-210ENST00000569394 LOC107984640A0A0U1RRK4 108 aa5.71□□□□□ -1.5
GTF3C1-210ENST00000569394 NDUFA1O15239 70 aa5.71□□□□□ -1.5
GTF3C1-210ENST00000569394 LINC00614P0C842 121 aa5.71□□□□□ -1.5
GTF3C1-210ENST00000569394 G0S2P27469 103 aa5.71□□□□□ -1.5
GTF3C1-210ENST00000569394 GAGE2EQ4V326 116 aa5.71□□□□□ -1.5
GTF3C1-210ENST00000569394 GAGE2DQ9UEU5 116 aa5.71□□□□□ -1.5
GTF3C1-210ENST00000569394 CDKN2A-AS1Q9UH64 79 aa5.71□□□□□ -1.5
GTF3C1-210ENST00000569394 A0A087WZ39 114 aa5.7□□□□□ -1.5
GTF3C1-210ENST00000569394 C9orf118A6NHY6 69 aa5.7□□□□□ -1.5
GTF3C1-210ENST00000569394 PRSS2P07478 247 aa5.7□□□□□ -1.5
GTF3C1-210ENST00000569394 C9orf116Q5BN46 136 aaPredicted RBP5.7□□□□□ -1.5
GTF3C1-210ENST00000569394 LINC00469Q8N7U9 141 aa5.7□□□□□ -1.5
GTF3C1-210ENST00000569394 OR10D4PQ8NGN7 298 aa5.7□□□□□ -1.5
GTF3C1-210ENST00000569394 C2orf48Q96LS8 159 aa5.7□□□□□ -1.5
GTF3C1-210ENST00000569394 PACRGQ96M98 296 aaPredicted RBP5.7□□□□□ -1.5
GTF3C1-210ENST00000569394 YPEL4Q96NS1 127 aa5.7□□□□□ -1.5
GTF3C1-210ENST00000569394 TIMM17AQ99595 171 aa5.7□□□□□ -1.5
GTF3C1-210ENST00000569394 C6orf48Q9UBA6 75 aa5.7□□□□□ -1.5
GTF3C1-210ENST00000569394 A0A1W2PNN7 141 aa5.69□□□□□ -1.5
GTF3C1-210ENST00000569394 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.69□□□□□ -1.5
GTF3C1-210ENST00000569394 SCO1O75880 301 aa5.69□□□□□ -1.5
GTF3C1-210ENST00000569394 TRGC2P03986 189 aa5.69□□□□□ -1.5
GTF3C1-210ENST00000569394 SPINK8P0C7L1 97 aa5.69□□□□□ -1.5
GTF3C1-210ENST00000569394 HNRNPA3P51991 378 aaKnown RBP5.69□□□□□ -1.5
GTF3C1-210ENST00000569394 PTTG1IPP53801 180 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms