RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 SEC11AP67812 179 aa9.86□□□□□ -0.83
COMMD4-219ENST00000567399 URB1-AS1Q96HZ7 61 aa9.86□□□□□ -0.83
COMMD4-219ENST00000567399 GEMIN7Q9H840 131 aaKnown RBP9.86□□□□□ -0.83
COMMD4-219ENST00000567399 HSBP1O75506 76 aa9.85□□□□□ -0.83
COMMD4-219ENST00000567399 LINC00242Q5T6M2 205 aa9.85□□□□□ -0.83
COMMD4-219ENST00000567399 LINC00526Q96FQ7 95 aa9.85□□□□□ -0.83
COMMD4-219ENST00000567399 IGHV3OR16-9A0A0B4J2B5 98 aa9.84□□□□□ -0.83
COMMD4-219ENST00000567399 ATP5LO75964 103 aa9.84□□□□□ -0.83
COMMD4-219ENST00000567399 CNBPP62633 177 aaKnown RBP9.84□□□□□ -0.83
COMMD4-219ENST00000567399 COX6A2Q02221 97 aa9.84□□□□□ -0.83
COMMD4-219ENST00000567399 PMVKQ15126 192 aa9.84□□□□□ -0.83
COMMD4-219ENST00000567399 LINC00173Q6ZV60 143 aa9.84□□□□□ -0.83
COMMD4-219ENST00000567399 C9orf163Q8N9P6 203 aa9.84□□□□□ -0.83
COMMD4-219ENST00000567399 ORAOV1Q8WV07 137 aa9.84□□□□□ -0.83
COMMD4-219ENST00000567399 IGHV3-64A0A075B6Q5 118 aa9.83□□□□□ -0.84
COMMD4-219ENST00000567399 HERVK_113P63121 156 aa9.83□□□□□ -0.84
COMMD4-219ENST00000567399 DPH3Q96FX2 82 aa9.83□□□□□ -0.84
COMMD4-219ENST00000567399 IGLV4-69A0A075B6H9 119 aa9.82□□□□□ -0.84
COMMD4-219ENST00000567399 SPAG11BQ08648 103 aa9.82□□□□□ -0.84
COMMD4-219ENST00000567399 PACRGQ96M98 296 aaPredicted RBP9.82□□□□□ -0.84
COMMD4-219ENST00000567399 CST9LQ9H4G1 147 aa9.82□□□□□ -0.84
COMMD4-219ENST00000567399 A0A087WZ39 114 aa9.81□□□□□ -0.84
COMMD4-219ENST00000567399 A0A096LNJ9 63 aa9.81□□□□□ -0.84
COMMD4-219ENST00000567399 A0A0J9YXV3 536 aa9.81□□□□□ -0.84
COMMD4-219ENST00000567399 ATP6V1G1O75348 118 aa9.81□□□□□ -0.84
COMMD4-219ENST00000567399 SLPIP03973 132 aa9.81□□□□□ -0.84
COMMD4-219ENST00000567399 SYCNQ0VAF6 134 aa9.81□□□□□ -0.84
COMMD4-219ENST00000567399 OR10D4PQ8NGN7 298 aa9.81□□□□□ -0.84
COMMD4-219ENST00000567399 CARD19Q96LW7 228 aa9.81□□□□□ -0.84
COMMD4-219ENST00000567399 CAMK2N2Q96S95 79 aa9.81□□□□□ -0.84
COMMD4-219ENST00000567399 DNAH11Q96DT5 4516 aa9.81□□□□□ -0.84
COMMD4-219ENST00000567399 PDZD11Q5EBL8 140 aa9.8□□□□□ -0.84
COMMD4-219ENST00000567399 FAM30AQ9NZY2 134 aa9.8□□□□□ -0.84
COMMD4-219ENST00000567399 BIRC6Q9NR09 4857 aa9.8□□□□□ -0.84
COMMD4-219ENST00000567399 SERF1AO75920 110 aa9.79□□□□□ -0.84
COMMD4-219ENST00000567399 PRSS2P07478 247 aa9.79□□□□□ -0.84
COMMD4-219ENST00000567399 HAMPP81172 84 aa9.79□□□□□ -0.84
COMMD4-219ENST00000567399 FAM19A3Q7Z5A8 133 aa9.79□□□□□ -0.84
COMMD4-219ENST00000567399 FAM19A2Q8N3H0 131 aa9.79□□□□□ -0.84
COMMD4-219ENST00000567399 LINC00469Q8N7U9 141 aa9.79□□□□□ -0.84
COMMD4-219ENST00000567399 PKIGQ9Y2B9 76 aa9.79□□□□□ -0.84
COMMD4-219ENST00000567399 TINCRA0A1B0GVN0 87 aa9.78□□□□□ -0.84
COMMD4-219ENST00000567399 XGP55808 180 aa9.78□□□□□ -0.84
COMMD4-219ENST00000567399 LINC01561Q8N1V8 128 aa9.78□□□□□ -0.84
COMMD4-219ENST00000567399 C2orf48Q96LS8 159 aa9.78□□□□□ -0.84
COMMD4-219ENST00000567399 TOMM7Q9P0U1 55 aa9.78□□□□□ -0.84
COMMD4-219ENST00000567399 SDIM1Q6ZPB5 146 aa9.77□□□□□ -0.85
COMMD4-219ENST00000567399 IFI27L1Q96BM0 104 aa9.77□□□□□ -0.85
COMMD4-219ENST00000567399 CDKN2A-AS1Q9UH64 79 aa9.77□□□□□ -0.85
COMMD4-219ENST00000567399 F8WDY8 70 aa9.76□□□□□ -0.85
COMMD4-219ENST00000567399 H3BRM9 83 aa9.76□□□□□ -0.85
COMMD4-219ENST00000567399 NDUFA1O15239 70 aa9.76□□□□□ -0.85
COMMD4-219ENST00000567399 C6orf226Q5I0X4 101 aa9.76□□□□□ -0.85
COMMD4-219ENST00000567399 Q6ZRU5 148 aa9.76□□□□□ -0.85
COMMD4-219ENST00000567399 PKHD1P08F94 4074 aa9.75□□□□□ -0.85
COMMD4-219ENST00000567399 LEPROTL1O95214 131 aa9.75□□□□□ -0.85
COMMD4-219ENST00000567399 CHAC1Q9BUX1 264 aa9.75□□□□□ -0.85
COMMD4-219ENST00000567399 IGKV2-24A0A0C4DH68 120 aa9.74□□□□□ -0.85
COMMD4-219ENST00000567399 H0Y8G0 127 aa9.74□□□□□ -0.85
COMMD4-219ENST00000567399 SMR3BP02814 79 aaPredicted RBP9.74□□□□□ -0.85
COMMD4-219ENST00000567399 CKS1BP61024 79 aa9.74□□□□□ -0.85
COMMD4-219ENST00000567399 Q6ZSA8 131 aa9.74□□□□□ -0.85
COMMD4-219ENST00000567399 HSPB8Q9UJY1 196 aa9.74□□□□□ -0.85
COMMD4-219ENST00000567399 CHTOPQ9Y3Y2 248 aaKnown RBP9.74□□□□□ -0.85
COMMD4-219ENST00000567399 HIST1H2BKO60814 126 aa9.73□□□□□ -0.85
COMMD4-219ENST00000567399 HIST1H2BJP06899 126 aa9.73□□□□□ -0.85
COMMD4-219ENST00000567399 FABP4P15090 132 aa9.73□□□□□ -0.85
COMMD4-219ENST00000567399 HIST1H2BOP23527 126 aa9.73□□□□□ -0.85
COMMD4-219ENST00000567399 HIST1H2BBP33778 126 aa9.73□□□□□ -0.85
COMMD4-219ENST00000567399 HIST1H2BDP58876 126 aa9.73□□□□□ -0.85
COMMD4-219ENST00000567399 HIST1H2BCP62807 126 aa9.73□□□□□ -0.85
COMMD4-219ENST00000567399 HIST2H2BEQ16778 126 aa9.73□□□□□ -0.85
COMMD4-219ENST00000567399 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.73□□□□□ -0.85
COMMD4-219ENST00000567399 SCXQ7RTU7 201 aa9.73□□□□□ -0.85
COMMD4-219ENST00000567399 HIST1H2BHQ93079 126 aa9.73□□□□□ -0.85
COMMD4-219ENST00000567399 HIST1H2BNQ99877 126 aa9.73□□□□□ -0.85
COMMD4-219ENST00000567399 HIST1H2BMQ99879 126 aa9.73□□□□□ -0.85
COMMD4-219ENST00000567399 DYNC1H1Q14204 4646 aaKnown RBP9.73□□□□□ -0.85
COMMD4-219ENST00000567399 LOC107984640A0A0U1RRK4 108 aa9.72□□□□□ -0.85
COMMD4-219ENST00000567399 NUPR1O60356 82 aa9.72□□□□□ -0.85
COMMD4-219ENST00000567399 SPINK8P0C7L1 97 aa9.72□□□□□ -0.85
COMMD4-219ENST00000567399 IGLC3P0DOY3 106 aa9.72□□□□□ -0.85
COMMD4-219ENST00000567399 GAGE2BQ13066 116 aa9.72□□□□□ -0.85
COMMD4-219ENST00000567399 MAJINQ3KP22 176 aa9.72□□□□□ -0.85
COMMD4-219ENST00000567399 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.72□□□□□ -0.85
COMMD4-219ENST00000567399 CHTF8P0CG12 524 aa9.71□□□□□ -0.86
COMMD4-219ENST00000567399 RPL18AQ02543 176 aaKnown RBP9.71□□□□□ -0.86
COMMD4-219ENST00000567399 TMEM170BQ5T4T1 132 aa9.71□□□□□ -0.86
COMMD4-219ENST00000567399 UNQ6190/PRO20217Q6UXQ8 127 aa9.71□□□□□ -0.86
COMMD4-219ENST00000567399 CIRBP-AS1Q8TBR5 109 aa9.71□□□□□ -0.86
COMMD4-219ENST00000567399 MRPL35Q9NZE8 188 aaKnown RBP9.71□□□□□ -0.86
COMMD4-219ENST00000567399 LINC00474Q9P2X8 69 aa9.71□□□□□ -0.86
COMMD4-219ENST00000567399 IGLV5-45A0A087WSX0 123 aa9.7□□□□□ -0.86
COMMD4-219ENST00000567399 TRAV12-1A0A0B4J245 112 aa9.7□□□□□ -0.86
COMMD4-219ENST00000567399 FAM229AH3BQW9 127 aa9.7□□□□□ -0.86
COMMD4-219ENST00000567399 LINC00310P59036 64 aa9.7□□□□□ -0.86
COMMD4-219ENST00000567399 KIAA0087Q14695 138 aa9.7□□□□□ -0.86
COMMD4-219ENST00000567399 RNF151Q2KHN1 245 aa9.7□□□□□ -0.86
COMMD4-219ENST00000567399 C2orf82Q6UX34 121 aa9.7□□□□□ -0.86
COMMD4-219ENST00000567399 Q8IZM0 81 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms