RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 ORMDL3Q8N138 153 aa6.43□□□□□ -1.38
GTF3C1-206ENST00000566779 STPG4Q8N801 248 aa6.43□□□□□ -1.38
GTF3C1-206ENST00000566779 C7orf33Q8WU49 177 aa6.43□□□□□ -1.38
GTF3C1-206ENST00000566779 OPRPNQ99935 248 aaPredicted RBP6.43□□□□□ -1.38
GTF3C1-206ENST00000566779 MYCBP2O75592 4640 aa6.42□□□□□ -1.38
GTF3C1-206ENST00000566779 IGLV4-69A0A075B6H9 119 aa6.42□□□□□ -1.38
GTF3C1-206ENST00000566779 IFITM10A6NMD0 228 aa6.42□□□□□ -1.38
GTF3C1-206ENST00000566779 SYCNQ0VAF6 134 aa6.42□□□□□ -1.38
GTF3C1-206ENST00000566779 PNRC1Q12796 327 aaPredicted RBP6.42□□□□□ -1.38
GTF3C1-206ENST00000566779 TMEM136Q6ZRR5 245 aa6.42□□□□□ -1.38
GTF3C1-206ENST00000566779 ATP5L2Q7Z4Y8 100 aa6.42□□□□□ -1.38
GTF3C1-206ENST00000566779 CAMK2N2Q96S95 79 aa6.42□□□□□ -1.38
GTF3C1-206ENST00000566779 CTDSP1Q9GZU7 261 aa6.42□□□□□ -1.38
GTF3C1-206ENST00000566779 TRBV24-1A0A075B6N3 115 aa6.41□□□□□ -1.38
GTF3C1-206ENST00000566779 PHOX2AO14813 284 aa6.41□□□□□ -1.38
GTF3C1-206ENST00000566779 PPBPP02775 128 aa6.41□□□□□ -1.38
GTF3C1-206ENST00000566779 SPAG11BQ08648 103 aa6.41□□□□□ -1.38
GTF3C1-206ENST00000566779 GAGE2BQ13066 116 aa6.41□□□□□ -1.38
GTF3C1-206ENST00000566779 CIRBPQ14011 172 aaKnown RBP6.41□□□□□ -1.38
GTF3C1-206ENST00000566779 MAP1LC3AQ9H492 121 aa6.41□□□□□ -1.38
GTF3C1-206ENST00000566779 KRTAP29-1A8MX34 341 aaPredicted RBP6.4□□□□□ -1.38
GTF3C1-206ENST00000566779 IFI27P40305 119 aaPredicted RBP6.4□□□□□ -1.38
GTF3C1-206ENST00000566779 RPL18AQ02543 176 aaKnown RBP6.4□□□□□ -1.38
GTF3C1-206ENST00000566779 Q6ZRU5 148 aa6.4□□□□□ -1.38
GTF3C1-206ENST00000566779 ORAOV1Q8WV07 137 aa6.4□□□□□ -1.38
GTF3C1-206ENST00000566779 TIMM21Q9BVV7 248 aa6.4□□□□□ -1.38
GTF3C1-206ENST00000566779 SPANXA1Q9NS26 97 aa6.4□□□□□ -1.38
GTF3C1-206ENST00000566779 PKIGQ9Y2B9 76 aa6.4□□□□□ -1.38
GTF3C1-206ENST00000566779 CSDC2Q9Y534 153 aaKnown RBP6.4□□□□□ -1.38
GTF3C1-206ENST00000566779 GAGE10A6NGK3 116 aa6.39□□□□□ -1.39
GTF3C1-206ENST00000566779 PRYO14603 147 aa6.39□□□□□ -1.39
GTF3C1-206ENST00000566779 APOMO95445 188 aa6.39□□□□□ -1.39
GTF3C1-206ENST00000566779 SCGB1D1O95968 90 aa6.39□□□□□ -1.39
GTF3C1-206ENST00000566779 RPL32P62910 135 aaKnown RBP6.39□□□□□ -1.39
GTF3C1-206ENST00000566779 CLLU1Q5K131 121 aa6.39□□□□□ -1.39
GTF3C1-206ENST00000566779 PLAC8Q9NZF1 115 aa6.39□□□□□ -1.39
GTF3C1-206ENST00000566779 HERC1Q15751 4861 aa6.39□□□□□ -1.39
GTF3C1-206ENST00000566779 TGIF2-C20orf24A0A0A6YYL0 155 aa6.38□□□□□ -1.39
GTF3C1-206ENST00000566779 A0A0J9YXV3 536 aa6.38□□□□□ -1.39
GTF3C1-206ENST00000566779 LOC107984640A0A0U1RRK4 108 aa6.37□□□□□ -1.39
GTF3C1-206ENST00000566779 ADCYAP1P18509 176 aa6.37□□□□□ -1.39
GTF3C1-206ENST00000566779 KIAA1644Q3SXP7 199 aa6.37□□□□□ -1.39
GTF3C1-206ENST00000566779 COMMD7Q86VX2 200 aa6.37□□□□□ -1.39
GTF3C1-206ENST00000566779 ZC2HC1BQ5TFG8 222 aa6.36□□□□□ -1.39
GTF3C1-206ENST00000566779 C2orf66Q6UXQ4 117 aa6.36□□□□□ -1.39
GTF3C1-206ENST00000566779 Q6ZN92 141 aa6.36□□□□□ -1.39
GTF3C1-206ENST00000566779 TEX43Q6ZNM6 134 aa6.36□□□□□ -1.39
GTF3C1-206ENST00000566779 TMEM141Q96I45 108 aa6.36□□□□□ -1.39
GTF3C1-206ENST00000566779 C2orf88Q9BSF0 95 aa6.36□□□□□ -1.39
GTF3C1-206ENST00000566779 LINC00474Q9P2X8 69 aa6.36□□□□□ -1.39
GTF3C1-206ENST00000566779 CYSLTR1Q9Y271 337 aa6.36□□□□□ -1.39
GTF3C1-206ENST00000566779 IGLV4-3A0A075B6K6 122 aa6.35□□□□□ -1.39
GTF3C1-206ENST00000566779 OXTP01178 125 aa6.35□□□□□ -1.39
GTF3C1-206ENST00000566779 PRR3P79522 188 aaKnown RBP6.35□□□□□ -1.39
GTF3C1-206ENST00000566779 MRPS36P82909 103 aaKnown RBP6.35□□□□□ -1.39
GTF3C1-206ENST00000566779 IFITM2Q01629 132 aa6.35□□□□□ -1.39
GTF3C1-206ENST00000566779 Q8N8P6 123 aa6.35□□□□□ -1.39
GTF3C1-206ENST00000566779 FAM104AQ969W3 186 aa6.35□□□□□ -1.39
GTF3C1-206ENST00000566779 LAMTOR2Q9Y2Q5 125 aa6.35□□□□□ -1.39
GTF3C1-206ENST00000566779 TMEM218A2RU14 115 aa6.34□□□□□ -1.39
GTF3C1-206ENST00000566779 NDUFA1O15239 70 aa6.34□□□□□ -1.39
GTF3C1-206ENST00000566779 S100PP25815 95 aa6.34□□□□□ -1.39
GTF3C1-206ENST00000566779 ORMDL2Q53FV1 153 aa6.34□□□□□ -1.39
GTF3C1-206ENST00000566779 UQCC3Q6UW78 93 aa6.34□□□□□ -1.39
GTF3C1-206ENST00000566779 OR10D4PQ8NGN7 298 aa6.34□□□□□ -1.39
GTF3C1-206ENST00000566779 C2orf48Q96LS8 159 aa6.34□□□□□ -1.39
GTF3C1-206ENST00000566779 IMMP2LQ96T52 175 aa6.34□□□□□ -1.39
GTF3C1-206ENST00000566779 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.33□□□□□ -1.4
GTF3C1-206ENST00000566779 GAGE2EQ4V326 116 aa6.33□□□□□ -1.4
GTF3C1-206ENST00000566779 VCX2Q9H322 139 aa6.33□□□□□ -1.4
GTF3C1-206ENST00000566779 TOMM7Q9P0U1 55 aa6.33□□□□□ -1.4
GTF3C1-206ENST00000566779 GAGE2DQ9UEU5 116 aa6.33□□□□□ -1.4
GTF3C1-206ENST00000566779 IGHV3OR16-9A0A0B4J2B5 98 aa6.32□□□□□ -1.4
GTF3C1-206ENST00000566779 C9orf116Q5BN46 136 aaPredicted RBP6.32□□□□□ -1.4
GTF3C1-206ENST00000566779 LINC00242Q5T6M2 205 aa6.32□□□□□ -1.4
GTF3C1-206ENST00000566779 C10orf25Q5T742 122 aa6.32□□□□□ -1.4
GTF3C1-206ENST00000566779 C2orf82Q6UX34 121 aa6.32□□□□□ -1.4
GTF3C1-206ENST00000566779 UNQ6190/PRO20217Q6UXQ8 127 aa6.32□□□□□ -1.4
GTF3C1-206ENST00000566779 FAM19A5Q7Z5A7 132 aaPredicted RBP6.32□□□□□ -1.4
GTF3C1-206ENST00000566779 NXT2Q9NPJ8 142 aaKnown RBP6.32□□□□□ -1.4
GTF3C1-206ENST00000566779 PYGO1Q9Y3Y4 419 aa6.32□□□□□ -1.4
GTF3C1-206ENST00000566779 LRP1Q07954 4544 aaKnown RBP6.31□□□□□ -1.4
GTF3C1-206ENST00000566779 A0A1W2PNN7 141 aa6.31□□□□□ -1.4
GTF3C1-206ENST00000566779 PRSS2P07478 247 aa6.31□□□□□ -1.4
GTF3C1-206ENST00000566779 RPS10P5Q9NQ39 176 aa6.31□□□□□ -1.4
GTF3C1-206ENST00000566779 A0A087WZ39 114 aa6.3□□□□□ -1.4
GTF3C1-206ENST00000566779 FAM168BA1KXE4 195 aa6.3□□□□□ -1.4
GTF3C1-206ENST00000566779 MT-ND6P03923 174 aa6.3□□□□□ -1.4
GTF3C1-206ENST00000566779 UBE2D1P51668 147 aa6.3□□□□□ -1.4
GTF3C1-206ENST00000566779 LINC00173Q6ZV60 143 aa6.3□□□□□ -1.4
GTF3C1-206ENST00000566779 PHF5AQ7RTV0 110 aaKnown RBP6.3□□□□□ -1.4
GTF3C1-206ENST00000566779 PACRGQ96M98 296 aaPredicted RBP6.3□□□□□ -1.4
GTF3C1-206ENST00000566779 SEC11CQ9BY50 192 aa6.3□□□□□ -1.4
GTF3C1-206ENST00000566779 MRPL35Q9NZE8 188 aaKnown RBP6.3□□□□□ -1.4
GTF3C1-206ENST00000566779 C6orf48Q9UBA6 75 aa6.3□□□□□ -1.4
GTF3C1-206ENST00000566779 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
GTF3C1-206ENST00000566779 FABP9Q0Z7S8 132 aa6.29□□□□□ -1.4
GTF3C1-206ENST00000566779 Q6ZRP5 223 aa6.29□□□□□ -1.4
GTF3C1-206ENST00000566779 SCGB3A1Q96QR1 104 aa6.29□□□□□ -1.4
GTF3C1-206ENST00000566779 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms