RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 PYGO1Q9Y3Y4 419 aa8.84□□□□□ -0.99
SMPD3-204ENST00000563396 APOMO95445 188 aa8.83□□□□□ -1
SMPD3-204ENST00000563396 ADCYAP1P18509 176 aa8.83□□□□□ -1
SMPD3-204ENST00000563396 Q6ZRU5 148 aa8.83□□□□□ -1
SMPD3-204ENST00000563396 OR10D4PQ8NGN7 298 aa8.83□□□□□ -1
SMPD3-204ENST00000563396 IFI27P40305 119 aaPredicted RBP8.82□□□□□ -1
SMPD3-204ENST00000563396 IFITM2Q01629 132 aa8.82□□□□□ -1
SMPD3-204ENST00000563396 UQCC3Q6UW78 93 aa8.82□□□□□ -1
SMPD3-204ENST00000563396 C5orf38Q86SI9 138 aa8.82□□□□□ -1
SMPD3-204ENST00000563396 DPH3Q96FX2 82 aa8.82□□□□□ -1
SMPD3-204ENST00000563396 IMMP2LQ96T52 175 aa8.82□□□□□ -1
SMPD3-204ENST00000563396 MAP1LC3AQ9H492 121 aa8.82□□□□□ -1
SMPD3-204ENST00000563396 IGLV4-3A0A075B6K6 122 aa8.81□□□□□ -1
SMPD3-204ENST00000563396 IFITM10A6NMD0 228 aa8.81□□□□□ -1
SMPD3-204ENST00000563396 RAB5AP20339 215 aa8.81□□□□□ -1
SMPD3-204ENST00000563396 PTTG1IPP53801 180 aa8.81□□□□□ -1
SMPD3-204ENST00000563396 PRR3P79522 188 aaKnown RBP8.81□□□□□ -1
SMPD3-204ENST00000563396 SPAG11BQ08648 103 aa8.81□□□□□ -1
SMPD3-204ENST00000563396 CAMK2N2Q96S95 79 aa8.81□□□□□ -1
SMPD3-204ENST00000563396 OPRPNQ99935 248 aaPredicted RBP8.81□□□□□ -1
SMPD3-204ENST00000563396 LOC107984640A0A0U1RRK4 108 aa8.8□□□□□ -1
SMPD3-204ENST00000563396 F8WDY8 70 aa8.8□□□□□ -1
SMPD3-204ENST00000563396 K7EMI3 77 aa8.8□□□□□ -1
SMPD3-204ENST00000563396 Q8N8P6 123 aa8.8□□□□□ -1
SMPD3-204ENST00000563396 HMCN2Q8NDA2 5059 aa8.79□□□□□ -1
SMPD3-204ENST00000563396 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.79□□□□□ -1
SMPD3-204ENST00000563396 RNF151Q2KHN1 245 aa8.79□□□□□ -1
SMPD3-204ENST00000563396 MRPL35Q9NZE8 188 aaKnown RBP8.79□□□□□ -1
SMPD3-204ENST00000563396 TRAV9-1A0A075B6T8 112 aa8.78□□□□□ -1
SMPD3-204ENST00000563396 TMEM218A2RU14 115 aa8.78□□□□□ -1
SMPD3-204ENST00000563396 NPSP0C0P6 89 aa8.78□□□□□ -1
SMPD3-204ENST00000563396 MT1HL1P0DM35 61 aa8.78□□□□□ -1
SMPD3-204ENST00000563396 ORAOV1Q8WV07 137 aa8.78□□□□□ -1
SMPD3-204ENST00000563396 TMEM141Q96I45 108 aa8.78□□□□□ -1
SMPD3-204ENST00000563396 CTDSP1Q9GZU7 261 aa8.78□□□□□ -1
SMPD3-204ENST00000563396 CYSLTR1Q9Y271 337 aa8.78□□□□□ -1
SMPD3-204ENST00000563396 A0A087WZ39 114 aa8.77□□□□□ -1.01
SMPD3-204ENST00000563396 LOC389332A0A1B0GUA5 103 aa8.77□□□□□ -1.01
SMPD3-204ENST00000563396 ORMDL2Q53FV1 153 aa8.77□□□□□ -1.01
SMPD3-204ENST00000563396 LINC00242Q5T6M2 205 aa8.77□□□□□ -1.01
SMPD3-204ENST00000563396 LINC00173Q6ZV60 143 aa8.77□□□□□ -1.01
SMPD3-204ENST00000563396 TGIF2-C20orf24A0A0A6YYL0 155 aa8.76□□□□□ -1.01
SMPD3-204ENST00000563396 UBE2D1P51668 147 aa8.76□□□□□ -1.01
SMPD3-204ENST00000563396 SERTAD4-AS1Q5TG53 156 aa8.76□□□□□ -1.01
SMPD3-204ENST00000563396 C2orf66Q6UXQ4 117 aa8.76□□□□□ -1.01
SMPD3-204ENST00000563396 AMELXQ99217 191 aa8.76□□□□□ -1.01
SMPD3-204ENST00000563396 SEC11CQ9BY50 192 aa8.76□□□□□ -1.01
SMPD3-204ENST00000563396 NXT2Q9NPJ8 142 aaKnown RBP8.76□□□□□ -1.01
SMPD3-204ENST00000563396 TLX1NBP0CAT3 122 aa8.75□□□□□ -1.01
SMPD3-204ENST00000563396 GAGE2BQ13066 116 aa8.75□□□□□ -1.01
SMPD3-204ENST00000563396 TEX43Q6ZNM6 134 aa8.75□□□□□ -1.01
SMPD3-204ENST00000563396 FAM19A3Q7Z5A8 133 aa8.75□□□□□ -1.01
SMPD3-204ENST00000563396 LINC01561Q8N1V8 128 aa8.75□□□□□ -1.01
SMPD3-204ENST00000563396 A0A1W2PNN7 141 aa8.74□□□□□ -1.01
SMPD3-204ENST00000563396 IGIPA6NJ69 53 aa8.74□□□□□ -1.01
SMPD3-204ENST00000563396 LCE2BO14633 110 aa8.74□□□□□ -1.01
SMPD3-204ENST00000563396 NDUFA1O15239 70 aa8.74□□□□□ -1.01
SMPD3-204ENST00000563396 RPL18AQ02543 176 aaKnown RBP8.74□□□□□ -1.01
SMPD3-204ENST00000563396 KIAA0087Q14695 138 aa8.74□□□□□ -1.01
SMPD3-204ENST00000563396 C2orf88Q9BSF0 95 aa8.74□□□□□ -1.01
SMPD3-204ENST00000563396 Q6ZN92 141 aa8.73□□□□□ -1.01
SMPD3-204ENST00000563396 A0A0J9YXV3 536 aa8.72□□□□□ -1.01
SMPD3-204ENST00000563396 C9orf116Q5BN46 136 aaPredicted RBP8.72□□□□□ -1.01
SMPD3-204ENST00000563396 C10orf91Q5T1B1 145 aa8.72□□□□□ -1.01
SMPD3-204ENST00000563396 C10orf25Q5T742 122 aa8.72□□□□□ -1.01
SMPD3-204ENST00000563396 Q6ZRP5 223 aa8.72□□□□□ -1.01
SMPD3-204ENST00000563396 TIMM17AQ99595 171 aa8.72□□□□□ -1.01
SMPD3-204ENST00000563396 C6orf48Q9UBA6 75 aa8.72□□□□□ -1.01
SMPD3-204ENST00000563396 TNXBP22105 4242 aa8.72□□□□□ -1.01
SMPD3-204ENST00000563396 GNB1LQ9BYB4 327 aa8.71□□□□□ -1.02
SMPD3-204ENST00000563396 TRBV30A0A0K0K1B3 111 aa8.7□□□□□ -1.02
SMPD3-204ENST00000563396 LINC01546A6NGU7 62 aa8.7□□□□□ -1.02
SMPD3-204ENST00000563396 G0S2P27469 103 aa8.7□□□□□ -1.02
SMPD3-204ENST00000563396 SPINK6Q6UWN8 80 aa8.7□□□□□ -1.02
SMPD3-204ENST00000563396 UNQ6190/PRO20217Q6UXQ8 127 aa8.7□□□□□ -1.02
SMPD3-204ENST00000563396 COMMD7Q86VX2 200 aa8.7□□□□□ -1.02
SMPD3-204ENST00000563396 TOMM6Q96B49 74 aa8.7□□□□□ -1.02
SMPD3-204ENST00000563396 CARHSP1Q9Y2V2 147 aaKnown RBP8.7□□□□□ -1.02
SMPD3-204ENST00000563396 S100PP25815 95 aa8.69□□□□□ -1.02
SMPD3-204ENST00000563396 SRSF9Q13242 221 aaKnown RBP eCLIP8.69□□□□□ -1.02
SMPD3-204ENST00000563396 RHEBQ15382 184 aa8.69□□□□□ -1.02
SMPD3-204ENST00000563396 KIAA1644Q3SXP7 199 aa8.69□□□□□ -1.02
SMPD3-204ENST00000563396 PAPPA-AS1Q5QFB9 102 aa8.69□□□□□ -1.02
SMPD3-204ENST00000563396 ZC2HC1BQ5TFG8 222 aa8.69□□□□□ -1.02
SMPD3-204ENST00000563396 LINC01600Q96MT4 127 aa8.69□□□□□ -1.02
SMPD3-204ENST00000563396 VCX2Q9H322 139 aa8.69□□□□□ -1.02
SMPD3-204ENST00000563396 MT-ND6P03923 174 aa8.68□□□□□ -1.02
SMPD3-204ENST00000563396 COX19Q49B96 90 aa8.68□□□□□ -1.02
SMPD3-204ENST00000563396 LINC01549A6NIU2 74 aa8.67□□□□□ -1.02
SMPD3-204ENST00000563396 HERVK_113P63121 156 aa8.67□□□□□ -1.02
SMPD3-204ENST00000563396 SEC11AP67812 179 aa8.67□□□□□ -1.02
SMPD3-204ENST00000563396 ALKBH7Q9BT30 221 aaPredicted RBP8.67□□□□□ -1.02
SMPD3-204ENST00000563396 C2orf82Q6UX34 121 aa8.66□□□□□ -1.02
SMPD3-204ENST00000563396 PHF5AQ7RTV0 110 aaKnown RBP8.66□□□□□ -1.02
SMPD3-204ENST00000563396 ERASQ7Z444 233 aa8.66□□□□□ -1.02
SMPD3-204ENST00000563396 Q8IZM0 81 aa8.66□□□□□ -1.02
SMPD3-204ENST00000563396 PSORS1C2Q9UIG4 136 aa8.66□□□□□ -1.02
SMPD3-204ENST00000563396 PLA2G2DQ9UNK4 145 aa8.66□□□□□ -1.02
SMPD3-204ENST00000563396 NDUFC2-KCTD14E9PQ53 114 aa8.65□□□□□ -1.02
SMPD3-204ENST00000563396 REG3GQ6UW15 175 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms