RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 ERC2-IT1O76042 136 aa1.8□□□□□ -2.12
SMG1-204ENST00000561940 APOC1P02654 83 aa1.8□□□□□ -2.12
SMG1-204ENST00000561940 LINC00032P0C843 101 aa1.8□□□□□ -2.12
SMG1-204ENST00000561940 RPL35P42766 123 aaKnown RBP1.8□□□□□ -2.12
SMG1-204ENST00000561940 HAMPP81172 84 aa1.8□□□□□ -2.12
SMG1-204ENST00000561940 DIAPH2-AS1Q14236 149 aa1.8□□□□□ -2.12
SMG1-204ENST00000561940 UNQ5815/PRO19632Q6UWF5 114 aa1.8□□□□□ -2.12
SMG1-204ENST00000561940 PHF5AQ7RTV0 110 aaKnown RBP1.8□□□□□ -2.12
SMG1-204ENST00000561940 BORCS5Q969J3 196 aa1.8□□□□□ -2.12
SMG1-204ENST00000561940 CDC42SE1Q9NRR8 79 aa1.8□□□□□ -2.12
SMG1-204ENST00000561940 ORMDL1Q9P0S3 153 aa1.8□□□□□ -2.12
SMG1-204ENST00000561940 LAMTOR2Q9Y2Q5 125 aa1.8□□□□□ -2.12
SMG1-204ENST00000561940 ODAMA1E959 279 aa1.79□□□□□ -2.12
SMG1-204ENST00000561940 LYRM1O43325 122 aa1.79□□□□□ -2.12
SMG1-204ENST00000561940 EMX2Q04743 252 aa1.79□□□□□ -2.12
SMG1-204ENST00000561940 MSMO1Q15800 293 aa1.79□□□□□ -2.12
SMG1-204ENST00000561940 FAM19A2Q8N3H0 131 aa1.79□□□□□ -2.12
SMG1-204ENST00000561940 BORCS8Q96FH0 119 aa1.79□□□□□ -2.12
SMG1-204ENST00000561940 LINC01600Q96MT4 127 aa1.79□□□□□ -2.12
SMG1-204ENST00000561940 ODF3Q96PU9 254 aa1.79□□□□□ -2.12
SMG1-204ENST00000561940 DPH3P1Q9H4G8 78 aa1.79□□□□□ -2.12
SMG1-204ENST00000561940 SMPXQ9UHP9 88 aa1.79□□□□□ -2.12
SMG1-204ENST00000561940 DNAJC15Q9Y5T4 150 aa1.79□□□□□ -2.12
SMG1-204ENST00000561940 FAT3Q8TDW7 4589 aa1.79□□□□□ -2.12
SMG1-204ENST00000561940 A0A087WSZ3 146 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 TRAV27A0A087WT01 109 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 C5orf58C9J3I9 102 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 K7EP13 123 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 TPST1O60507 370 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 NDUFA3O95167 84 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 FAM107AO95990 144 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 CD14P08571 375 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 S100A3P33764 101 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 ZNF137PP52743 207 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 DNAJB13P59910 316 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 GDF5OSQ5U4N7 250 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 RAB37Q96AX2 223 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 HYLS1Q96M11 299 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 TMEM14BQ9NUH8 114 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 ZFP30Q9Y2G7 519 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 MED31Q9Y3C7 131 aa1.78□□□□□ -2.12
SMG1-204ENST00000561940 FAM223BA6NKX1 122 aa1.77□□□□□ -2.13
SMG1-204ENST00000561940 RPL37AP61513 92 aaKnown RBP1.77□□□□□ -2.13
SMG1-204ENST00000561940 ZNF833PQ6ZTB9 187 aa1.77□□□□□ -2.13
SMG1-204ENST00000561940 TEN1Q86WV5 123 aa1.77□□□□□ -2.13
SMG1-204ENST00000561940 PRR15Q8IV56 129 aa1.77□□□□□ -2.13
SMG1-204ENST00000561940 FAM223AQ8IWN6 122 aa1.77□□□□□ -2.13
SMG1-204ENST00000561940 AMELYQ99218 206 aa1.77□□□□□ -2.13
SMG1-204ENST00000561940 RERGLQ9H628 205 aa1.77□□□□□ -2.13
SMG1-204ENST00000561940 TPT1P8Q9HAU6 139 aa1.77□□□□□ -2.13
SMG1-204ENST00000561940 TRBV6-4A0A1B0GX49 114 aa1.76□□□□□ -2.13
SMG1-204ENST00000561940 CPSF4LA6NMK7 179 aaKnown RBP1.76□□□□□ -2.13
SMG1-204ENST00000561940 K7ERJ3 54 aa1.76□□□□□ -2.13
SMG1-204ENST00000561940 CD2P06729 351 aa1.76□□□□□ -2.13
SMG1-204ENST00000561940 FXYD3Q14802 87 aa1.76□□□□□ -2.13
SMG1-204ENST00000561940 TDRG1Q3Y452 100 aa1.76□□□□□ -2.13
SMG1-204ENST00000561940 NAT8BQ9UHF3 227 aa1.76□□□□□ -2.13
SMG1-204ENST00000561940 TRDV1A0A1B0GX56 115 aa1.75□□□□□ -2.13
SMG1-204ENST00000561940 A0A1W2PRE2 83 aa1.75□□□□□ -2.13
SMG1-204ENST00000561940 hDV103S1A0JD37 113 aa1.75□□□□□ -2.13
SMG1-204ENST00000561940 F8W1H4 67 aa1.75□□□□□ -2.13
SMG1-204ENST00000561940 BCL2P10415 239 aa1.75□□□□□ -2.13
SMG1-204ENST00000561940 HTN3P15516 51 aa1.75□□□□□ -2.13
SMG1-204ENST00000561940 NDUFA6P56556 154 aa1.75□□□□□ -2.13
SMG1-204ENST00000561940 B2MP61769 119 aa1.75□□□□□ -2.13
SMG1-204ENST00000561940 PLGLAQ15195 96 aa1.75□□□□□ -2.13
SMG1-204ENST00000561940 ARPINQ7Z6K5 226 aa1.75□□□□□ -2.13
SMG1-204ENST00000561940 LEAP2Q969E1 77 aa1.75□□□□□ -2.13
SMG1-204ENST00000561940 LINC00052Q96N35 136 aa1.75□□□□□ -2.13
SMG1-204ENST00000561940 FAM103A1Q9BTL3 118 aaKnown RBP1.75□□□□□ -2.13
SMG1-204ENST00000561940 TMEM14CQ9P0S9 112 aa1.75□□□□□ -2.13
SMG1-204ENST00000561940 IGHV1-58A0A0C4DH39 117 aa1.74□□□□□ -2.13
SMG1-204ENST00000561940 H3BNG1 76 aa1.74□□□□□ -2.13
SMG1-204ENST00000561940 NUPR1O60356 82 aa1.74□□□□□ -2.13
SMG1-204ENST00000561940 OR2H2O95918 312 aa1.74□□□□□ -2.13
SMG1-204ENST00000561940 CYB5AP00167 134 aa1.74□□□□□ -2.13
SMG1-204ENST00000561940 DR1Q01658 176 aa1.74□□□□□ -2.13
SMG1-204ENST00000561940 CIRBPQ14011 172 aaKnown RBP1.74□□□□□ -2.13
SMG1-204ENST00000561940 CCDC153Q494R4 210 aa1.74□□□□□ -2.13
SMG1-204ENST00000561940 TOMM20LQ6UXN7 152 aa1.74□□□□□ -2.13
SMG1-204ENST00000561940 LZICQ8WZA0 190 aa1.74□□□□□ -2.13
SMG1-204ENST00000561940 OBSCN-AS1Q96MR7 158 aa1.74□□□□□ -2.13
SMG1-204ENST00000561940 GGACTQ9BVM4 153 aa1.74□□□□□ -2.13
SMG1-204ENST00000561940 OTORQ9NRC9 128 aa1.74□□□□□ -2.13
SMG1-204ENST00000561940 IER3IP1Q9Y5U9 82 aa1.74□□□□□ -2.13
SMG1-204ENST00000561940 TRAV2A0A0B4J234 112 aa1.73□□□□□ -2.13
SMG1-204ENST00000561940 H3BRM9 83 aa1.73□□□□□ -2.13
SMG1-204ENST00000561940 DEGS1O15121 323 aa1.73□□□□□ -2.13
SMG1-204ENST00000561940 CCL25O15444 150 aa1.73□□□□□ -2.13
SMG1-204ENST00000561940 DNAL4O96015 105 aa1.73□□□□□ -2.13
SMG1-204ENST00000561940 MT-ND6P03923 174 aa1.73□□□□□ -2.13
SMG1-204ENST00000561940 COX7CP15954 63 aa1.73□□□□□ -2.13
SMG1-204ENST00000561940 OR4B1Q8NGF8 309 aa1.73□□□□□ -2.13
SMG1-204ENST00000561940 OR10AG1Q8NH19 301 aa1.73□□□□□ -2.13
SMG1-204ENST00000561940 COA4Q9NYJ1 87 aa1.73□□□□□ -2.13
SMG1-204ENST00000561940 METTL1Q9UBP6 276 aaKnown RBP1.73□□□□□ -2.13
SMG1-204ENST00000561940 TNXBP22105 4242 aa1.73□□□□□ -2.13
SMG1-204ENST00000561940 SSPOA2VEC9 5147 aa1.73□□□□□ -2.13
SMG1-204ENST00000561940 TRBV7-1A0A0A6YYK4 115 aa1.72□□□□□ -2.13
SMG1-204ENST00000561940 H0YJX3 145 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms