RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 RAB4AP20338 218 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 TAGLN2P37802 199 aaKnown RBP4.47□□□□□ -1.69
GABPB1-211ENST00000561010 POLR2KP53803 58 aaKnown RBP4.47□□□□□ -1.69
GABPB1-211ENST00000561010 SYCNQ0VAF6 134 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 GAGE2BQ13066 116 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 MRAP2Q96G30 205 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 TMEM101Q96IK0 257 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 BTF3L4Q96K17 158 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 SMIM7Q9BQ49 75 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 CDC42SE2Q9NRR3 84 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 A0A1B0GUT8 65 aa4.46□□□□□ -1.7
GABPB1-211ENST00000561010 TMEM250H0YL14 139 aa4.46□□□□□ -1.7
GABPB1-211ENST00000561010 ADCYAP1P18509 176 aa4.46□□□□□ -1.7
GABPB1-211ENST00000561010 CAMPP49913 170 aa4.46□□□□□ -1.7
GABPB1-211ENST00000561010 RHEBQ15382 184 aa4.46□□□□□ -1.7
GABPB1-211ENST00000561010 SS18Q15532 418 aa4.46□□□□□ -1.7
GABPB1-211ENST00000561010 Q6ZUT4 128 aa4.46□□□□□ -1.7
GABPB1-211ENST00000561010 FAM231DQ6ZW35 169 aa4.46□□□□□ -1.7
GABPB1-211ENST00000561010 C5orf38Q86SI9 138 aa4.46□□□□□ -1.7
GABPB1-211ENST00000561010 LINC01551Q86U37 167 aa4.46□□□□□ -1.7
GABPB1-211ENST00000561010 ZNF664Q8N3J9 261 aa4.46□□□□□ -1.7
GABPB1-211ENST00000561010 NRACQ8N912 160 aa4.46□□□□□ -1.7
GABPB1-211ENST00000561010 OPRPNQ99935 248 aaPredicted RBP4.46□□□□□ -1.7
GABPB1-211ENST00000561010 TRAV13-1A0A0B4J241 112 aa4.45□□□□□ -1.7
GABPB1-211ENST00000561010 C7orf77A4D0Y5 90 aa4.45□□□□□ -1.7
GABPB1-211ENST00000561010 MT-ND4LP03901 98 aa4.45□□□□□ -1.7
GABPB1-211ENST00000561010 KRTAP10-8P60410 259 aa4.45□□□□□ -1.7
GABPB1-211ENST00000561010 SRSF9Q13242 221 aaKnown RBP eCLIP4.45□□□□□ -1.7
GABPB1-211ENST00000561010 FAM74A3Q4VXF1 159 aa4.45□□□□□ -1.7
GABPB1-211ENST00000561010 CD164L2Q6UWJ8 174 aa4.45□□□□□ -1.7
GABPB1-211ENST00000561010 MRPL52Q86TS9 123 aaKnown RBP4.45□□□□□ -1.7
GABPB1-211ENST00000561010 TSKUQ8WUA8 353 aa4.45□□□□□ -1.7
GABPB1-211ENST00000561010 BORCS7Q96B45 105 aa4.45□□□□□ -1.7
GABPB1-211ENST00000561010 TMEM191AQ9H0A3 160 aa4.45□□□□□ -1.7
GABPB1-211ENST00000561010 RPS10P5Q9NQ39 176 aa4.45□□□□□ -1.7
GABPB1-211ENST00000561010 V9GYV3 84 aa4.45□□□□□ -1.7
GABPB1-211ENST00000561010 IGLV5-39A0A0G2JS06 123 aa4.44□□□□□ -1.7
GABPB1-211ENST00000561010 TRBV27A0A0K0K1C4 114 aa4.44□□□□□ -1.7
GABPB1-211ENST00000561010 LOC107984640A0A0U1RRK4 108 aa4.44□□□□□ -1.7
GABPB1-211ENST00000561010 ZNF727A8MUV8 499 aa4.44□□□□□ -1.7
GABPB1-211ENST00000561010 C1orf196B1AJZ1 125 aa4.44□□□□□ -1.7
GABPB1-211ENST00000561010 SRP19P09132 144 aaKnown RBP4.44□□□□□ -1.7
GABPB1-211ENST00000561010 FCER1GP30273 86 aa4.44□□□□□ -1.7
GABPB1-211ENST00000561010 RAB5BP61020 215 aa4.44□□□□□ -1.7
GABPB1-211ENST00000561010 RPL39P62891 51 aaKnown RBP4.44□□□□□ -1.7
GABPB1-211ENST00000561010 RPL18AQ02543 176 aaKnown RBP4.44□□□□□ -1.7
GABPB1-211ENST00000561010 PNRC1Q12796 327 aaPredicted RBP4.44□□□□□ -1.7
GABPB1-211ENST00000561010 SPINK6Q6UWN8 80 aa4.44□□□□□ -1.7
GABPB1-211ENST00000561010 PHF5AQ7RTV0 110 aaKnown RBP4.44□□□□□ -1.7
GABPB1-211ENST00000561010 KRTAP11-1Q8IUC1 163 aa4.44□□□□□ -1.7
GABPB1-211ENST00000561010 NUP35Q8NFH5 326 aa4.44□□□□□ -1.7
GABPB1-211ENST00000561010 CAMK2N2Q96S95 79 aa4.44□□□□□ -1.7
GABPB1-211ENST00000561010 UBE2D4Q9Y2X8 147 aa4.44□□□□□ -1.7
GABPB1-211ENST00000561010 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
GABPB1-211ENST00000561010 FAM168BA1KXE4 195 aa4.43□□□□□ -1.7
GABPB1-211ENST00000561010 C9JQL5 133 aa4.43□□□□□ -1.7
GABPB1-211ENST00000561010 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.43□□□□□ -1.7
GABPB1-211ENST00000561010 COX7A2LO14548 114 aa4.43□□□□□ -1.7
GABPB1-211ENST00000561010 MRPL51Q4U2R6 128 aaKnown RBP4.43□□□□□ -1.7
GABPB1-211ENST00000561010 C9orf116Q5BN46 136 aaPredicted RBP4.43□□□□□ -1.7
GABPB1-211ENST00000561010 REG3GQ6UW15 175 aa4.43□□□□□ -1.7
GABPB1-211ENST00000561010 Q6ZRP5 223 aa4.43□□□□□ -1.7
GABPB1-211ENST00000561010 FAM104AQ969W3 186 aa4.43□□□□□ -1.7
GABPB1-211ENST00000561010 OSTCQ9NRP0 149 aa4.43□□□□□ -1.7
GABPB1-211ENST00000561010 LINC00474Q9P2X8 69 aa4.43□□□□□ -1.7
GABPB1-211ENST00000561010 PSORS1C2Q9UIG4 136 aa4.43□□□□□ -1.7
GABPB1-211ENST00000561010 COLCA2A8K830 154 aa4.42□□□□□ -1.7
GABPB1-211ENST00000561010 VCYO14598 125 aa4.42□□□□□ -1.7
GABPB1-211ENST00000561010 S100A6P06703 90 aa4.42□□□□□ -1.7
GABPB1-211ENST00000561010 SPAG11BQ08648 103 aa4.42□□□□□ -1.7
GABPB1-211ENST00000561010 RIGQ13278 110 aa4.42□□□□□ -1.7
GABPB1-211ENST00000561010 ADIRFQ15847 76 aa4.42□□□□□ -1.7
GABPB1-211ENST00000561010 CBLN2Q8IUK8 224 aa4.42□□□□□ -1.7
GABPB1-211ENST00000561010 ISOC2Q96AB3 205 aa4.42□□□□□ -1.7
GABPB1-211ENST00000561010 TCAPO15273 167 aa4.41□□□□□ -1.7
GABPB1-211ENST00000561010 APOMO95445 188 aa4.41□□□□□ -1.7
GABPB1-211ENST00000561010 MT-ND6P03923 174 aa4.41□□□□□ -1.7
GABPB1-211ENST00000561010 RPL23P62829 140 aaKnown RBP4.41□□□□□ -1.7
GABPB1-211ENST00000561010 C1orf137Q5JT78 98 aa4.41□□□□□ -1.7
GABPB1-211ENST00000561010 FAM104BQ5XKR9 115 aa4.41□□□□□ -1.7
GABPB1-211ENST00000561010 MRPL54Q6P161 138 aaKnown RBP4.41□□□□□ -1.7
GABPB1-211ENST00000561010 ORAOV1Q8WV07 137 aa4.41□□□□□ -1.7
GABPB1-211ENST00000561010 NPYP01303 97 aa4.4□□□□□ -1.71
GABPB1-211ENST00000561010 IGKV2-30P06310 120 aa4.4□□□□□ -1.71
GABPB1-211ENST00000561010 RAB5AP20339 215 aa4.4□□□□□ -1.71
GABPB1-211ENST00000561010 TMEM241Q24JQ0 296 aa4.4□□□□□ -1.71
GABPB1-211ENST00000561010 UNQ6190/PRO20217Q6UXQ8 127 aa4.4□□□□□ -1.71
GABPB1-211ENST00000561010 FAM19A5Q7Z5A7 132 aaPredicted RBP4.4□□□□□ -1.71
GABPB1-211ENST00000561010 PRR26Q8N8Z3 221 aa4.4□□□□□ -1.71
GABPB1-211ENST00000561010 KIR2DL4Q99706 377 aa4.4□□□□□ -1.71
GABPB1-211ENST00000561010 CSDC2Q9Y534 153 aaKnown RBP4.4□□□□□ -1.71
GABPB1-211ENST00000561010 LPAP08519 4548 aa4.4□□□□□ -1.71
GABPB1-211ENST00000561010 SMIM27A0A1W2PRY6 76 aa4.39□□□□□ -1.71
GABPB1-211ENST00000561010 D6R8Y8 96 aa4.39□□□□□ -1.71
GABPB1-211ENST00000561010 S100A8P05109 93 aa4.39□□□□□ -1.71
GABPB1-211ENST00000561010 CKS2P33552 79 aa4.39□□□□□ -1.71
GABPB1-211ENST00000561010 ZC2HC1BQ5TFG8 222 aa4.39□□□□□ -1.71
GABPB1-211ENST00000561010 KRTAP7-1Q8IUC3 87 aa4.39□□□□□ -1.71
GABPB1-211ENST00000561010 C2orf48Q96LS8 159 aa4.39□□□□□ -1.71
GABPB1-211ENST00000561010 TIMM21Q9BVV7 248 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms