RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 MAP1LC3AQ9H492 121 aa8.01□□□□□ -1.13
LRRC28-214ENST00000559433 KRTAP29-1A8MX34 341 aaPredicted RBP8□□□□□ -1.13
LRRC28-214ENST00000559433 MRPS36P82909 103 aaKnown RBP8□□□□□ -1.13
LRRC28-214ENST00000559433 COMMD7Q86VX2 200 aa8□□□□□ -1.13
LRRC28-214ENST00000559433 C7orf33Q8WU49 177 aa8□□□□□ -1.13
LRRC28-214ENST00000559433 FAM104AQ969W3 186 aa8□□□□□ -1.13
LRRC28-214ENST00000559433 IMMP2LQ96T52 175 aa8□□□□□ -1.13
LRRC28-214ENST00000559433 OPRPNQ99935 248 aaPredicted RBP8□□□□□ -1.13
LRRC28-214ENST00000559433 LINC00474Q9P2X8 69 aa8□□□□□ -1.13
LRRC28-214ENST00000559433 IFITM10A6NMD0 228 aa7.99□□□□□ -1.13
LRRC28-214ENST00000559433 PRSS47A8MTI9 375 aa7.99□□□□□ -1.13
LRRC28-214ENST00000559433 IFI27P40305 119 aaPredicted RBP7.99□□□□□ -1.13
LRRC28-214ENST00000559433 SYCNQ0VAF6 134 aa7.99□□□□□ -1.13
LRRC28-214ENST00000559433 C5orf38Q86SI9 138 aa7.99□□□□□ -1.13
LRRC28-214ENST00000559433 CTDSP1Q9GZU7 261 aa7.99□□□□□ -1.13
LRRC28-214ENST00000559433 IGLV4-69A0A075B6H9 119 aa7.98□□□□□ -1.13
LRRC28-214ENST00000559433 A0A096LNI7 61 aa7.98□□□□□ -1.13
LRRC28-214ENST00000559433 APOMO95445 188 aa7.98□□□□□ -1.13
LRRC28-214ENST00000559433 OXTP01178 125 aa7.98□□□□□ -1.13
LRRC28-214ENST00000559433 Q8N8P6 123 aa7.98□□□□□ -1.13
LRRC28-214ENST00000559433 SEC11CQ9BY50 192 aa7.98□□□□□ -1.13
LRRC28-214ENST00000559433 PLAC8Q9NZF1 115 aa7.98□□□□□ -1.13
LRRC28-214ENST00000559433 STPG4Q8N801 248 aa7.97□□□□□ -1.13
LRRC28-214ENST00000559433 PKHD1L1Q86WI1 4243 aa7.97□□□□□ -1.13
LRRC28-214ENST00000559433 IGLV4-3A0A075B6K6 122 aa7.96□□□□□ -1.14
LRRC28-214ENST00000559433 TRAV9-1A0A075B6T8 112 aa7.96□□□□□ -1.14
LRRC28-214ENST00000559433 S100PP25815 95 aa7.96□□□□□ -1.14
LRRC28-214ENST00000559433 SPAG11BQ08648 103 aa7.96□□□□□ -1.14
LRRC28-214ENST00000559433 Q6ZRU5 148 aa7.96□□□□□ -1.14
LRRC28-214ENST00000559433 CAMK2N2Q96S95 79 aa7.96□□□□□ -1.14
LRRC28-214ENST00000559433 PYGO1Q9Y3Y4 419 aa7.96□□□□□ -1.14
LRRC28-214ENST00000559433 ORMDL2Q53FV1 153 aa7.95□□□□□ -1.14
LRRC28-214ENST00000559433 C2orf66Q6UXQ4 117 aa7.95□□□□□ -1.14
LRRC28-214ENST00000559433 OR10D4PQ8NGN7 298 aa7.95□□□□□ -1.14
LRRC28-214ENST00000559433 ORAOV1Q8WV07 137 aa7.95□□□□□ -1.14
LRRC28-214ENST00000559433 TMEM141Q96I45 108 aa7.95□□□□□ -1.14
LRRC28-214ENST00000559433 C2orf48Q96LS8 159 aa7.95□□□□□ -1.14
LRRC28-214ENST00000559433 NXT2Q9NPJ8 142 aaKnown RBP7.95□□□□□ -1.14
LRRC28-214ENST00000559433 CYSLTR1Q9Y271 337 aa7.95□□□□□ -1.14
LRRC28-214ENST00000559433 TGIF2-C20orf24A0A0A6YYL0 155 aa7.94□□□□□ -1.14
LRRC28-214ENST00000559433 IGHV3OR16-9A0A0B4J2B5 98 aa7.94□□□□□ -1.14
LRRC28-214ENST00000559433 LOC107984640A0A0U1RRK4 108 aa7.94□□□□□ -1.14
LRRC28-214ENST00000559433 HNRNPA3P51991 378 aaKnown RBP7.94□□□□□ -1.14
LRRC28-214ENST00000559433 KIAA1644Q3SXP7 199 aa7.94□□□□□ -1.14
LRRC28-214ENST00000559433 TEX43Q6ZNM6 134 aa7.94□□□□□ -1.14
LRRC28-214ENST00000559433 H3BS24 57 aa7.93□□□□□ -1.14
LRRC28-214ENST00000559433 K7EMI3 77 aa7.93□□□□□ -1.14
LRRC28-214ENST00000559433 GAGE2BQ13066 116 aa7.93□□□□□ -1.14
LRRC28-214ENST00000559433 Q6ZN92 141 aa7.93□□□□□ -1.14
LRRC28-214ENST00000559433 C2orf88Q9BSF0 95 aa7.93□□□□□ -1.14
LRRC28-214ENST00000559433 LRP1Q07954 4544 aaKnown RBP7.93□□□□□ -1.14
LRRC28-214ENST00000559433 PTTG1IPP53801 180 aa7.92□□□□□ -1.14
LRRC28-214ENST00000559433 RHEBQ15382 184 aa7.92□□□□□ -1.14
LRRC28-214ENST00000559433 C10orf91Q5T1B1 145 aa7.92□□□□□ -1.14
LRRC28-214ENST00000559433 LINC00242Q5T6M2 205 aa7.92□□□□□ -1.14
LRRC28-214ENST00000559433 FAT3Q8TDW7 4589 aa7.91□□□□□ -1.14
LRRC28-214ENST00000559433 UBE2D1P51668 147 aa7.91□□□□□ -1.14
LRRC28-214ENST00000559433 RPL18AQ02543 176 aaKnown RBP7.91□□□□□ -1.14
LRRC28-214ENST00000559433 GNB1LQ9BYB4 327 aa7.91□□□□□ -1.14
LRRC28-214ENST00000559433 RPS10P5Q9NQ39 176 aa7.91□□□□□ -1.14
LRRC28-214ENST00000559433 CARHSP1Q9Y2V2 147 aaKnown RBP7.91□□□□□ -1.14
LRRC28-214ENST00000559433 A0A087WZ39 114 aa7.9□□□□□ -1.14
LRRC28-214ENST00000559433 A0A0J9YXV3 536 aa7.9□□□□□ -1.14
LRRC28-214ENST00000559433 F8WDY8 70 aa7.9□□□□□ -1.14
LRRC28-214ENST00000559433 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.9□□□□□ -1.14
LRRC28-214ENST00000559433 NDUFA1O15239 70 aa7.9□□□□□ -1.14
LRRC28-214ENST00000559433 NPSP0C0P6 89 aa7.9□□□□□ -1.14
LRRC28-214ENST00000559433 G0S2P27469 103 aa7.9□□□□□ -1.14
LRRC28-214ENST00000559433 ZC2HC1BQ5TFG8 222 aa7.9□□□□□ -1.14
LRRC28-214ENST00000559433 SERTAD4-AS1Q5TG53 156 aa7.9□□□□□ -1.14
LRRC28-214ENST00000559433 LINC00173Q6ZV60 143 aa7.9□□□□□ -1.14
LRRC28-214ENST00000559433 VCX2Q9H322 139 aa7.9□□□□□ -1.14
LRRC28-214ENST00000559433 IGIPA6NJ69 53 aa7.89□□□□□ -1.15
LRRC28-214ENST00000559433 PRR3P79522 188 aaKnown RBP7.89□□□□□ -1.15
LRRC28-214ENST00000559433 RNF151Q2KHN1 245 aa7.89□□□□□ -1.15
LRRC28-214ENST00000559433 COX19Q49B96 90 aa7.89□□□□□ -1.15
LRRC28-214ENST00000559433 AMELXQ99217 191 aa7.89□□□□□ -1.15
LRRC28-214ENST00000559433 MT-ND6P03923 174 aa7.88□□□□□ -1.15
LRRC28-214ENST00000559433 TOMM6Q96B49 74 aa7.88□□□□□ -1.15
LRRC28-214ENST00000559433 ALKBH7Q9BT30 221 aaPredicted RBP7.88□□□□□ -1.15
LRRC28-214ENST00000559433 MRPL35Q9NZE8 188 aaKnown RBP7.88□□□□□ -1.15
LRRC28-214ENST00000559433 FABP9Q0Z7S8 132 aa7.87□□□□□ -1.15
LRRC28-214ENST00000559433 PAPPA-AS1Q5QFB9 102 aa7.87□□□□□ -1.15
LRRC28-214ENST00000559433 C10orf25Q5T742 122 aa7.87□□□□□ -1.15
LRRC28-214ENST00000559433 UNQ6190/PRO20217Q6UXQ8 127 aa7.87□□□□□ -1.15
LRRC28-214ENST00000559433 TIMM17AQ99595 171 aa7.87□□□□□ -1.15
LRRC28-214ENST00000559433 KIAA0087Q14695 138 aa7.86□□□□□ -1.15
LRRC28-214ENST00000559433 Q6ZRP5 223 aa7.86□□□□□ -1.15
LRRC28-214ENST00000559433 LINC01561Q8N1V8 128 aa7.86□□□□□ -1.15
LRRC28-214ENST00000559433 C6orf48Q9UBA6 75 aa7.86□□□□□ -1.15
LRRC28-214ENST00000559433 A0A1W2PNN7 141 aa7.85□□□□□ -1.15
LRRC28-214ENST00000559433 APOC3P02656 99 aa7.85□□□□□ -1.15
LRRC28-214ENST00000559433 C9orf116Q5BN46 136 aaPredicted RBP7.85□□□□□ -1.15
LRRC28-214ENST00000559433 FA2HQ7L5A8 372 aa7.85□□□□□ -1.15
LRRC28-214ENST00000559433 ERASQ7Z444 233 aa7.85□□□□□ -1.15
LRRC28-214ENST00000559433 FAM19A3Q7Z5A8 133 aa7.85□□□□□ -1.15
LRRC28-214ENST00000559433 SCGB3A1Q96QR1 104 aa7.85□□□□□ -1.15
LRRC28-214ENST00000559433 LINC01546A6NGU7 62 aa7.84□□□□□ -1.15
LRRC28-214ENST00000559433 PRSS2P07478 247 aa7.84□□□□□ -1.15
LRRC28-214ENST00000559433 HERVK_113P63121 156 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms