RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 Q6ZRU5 148 aa13.55□□□□□ -0.24
CRNDE-205ENST00000558952 FAM104AQ969W3 186 aa13.55□□□□□ -0.24
CRNDE-205ENST00000558952 C2orf48Q96LS8 159 aa13.55□□□□□ -0.24
CRNDE-205ENST00000558952 IMMP2LQ96T52 175 aa13.55□□□□□ -0.24
CRNDE-205ENST00000558952 LOC107984640A0A0U1RRK4 108 aa13.54□□□□□ -0.24
CRNDE-205ENST00000558952 OR10D4PQ8NGN7 298 aa13.54□□□□□ -0.24
CRNDE-205ENST00000558952 CTDSP1Q9GZU7 261 aa13.54□□□□□ -0.24
CRNDE-205ENST00000558952 PYGO1Q9Y3Y4 419 aa13.54□□□□□ -0.24
CRNDE-205ENST00000558952 TMEM218A2RU14 115 aa13.53□□□□□ -0.24
CRNDE-205ENST00000558952 Q8N8P6 123 aa13.53□□□□□ -0.24
CRNDE-205ENST00000558952 IFITM2Q01629 132 aa13.52□□□□□ -0.25
CRNDE-205ENST00000558952 GAGE2BQ13066 116 aa13.52□□□□□ -0.25
CRNDE-205ENST00000558952 ORAOV1Q8WV07 137 aa13.52□□□□□ -0.25
CRNDE-205ENST00000558952 TGIF2-C20orf24A0A0A6YYL0 155 aa13.51□□□□□ -0.25
CRNDE-205ENST00000558952 IGHV3OR16-9A0A0B4J2B5 98 aa13.51□□□□□ -0.25
CRNDE-205ENST00000558952 ADCYAP1P18509 176 aa13.51□□□□□ -0.25
CRNDE-205ENST00000558952 PTTG1IPP53801 180 aa13.51□□□□□ -0.25
CRNDE-205ENST00000558952 ORMDL2Q53FV1 153 aa13.51□□□□□ -0.25
CRNDE-205ENST00000558952 TMEM141Q96I45 108 aa13.51□□□□□ -0.25
CRNDE-205ENST00000558952 CYSLTR1Q9Y271 337 aa13.51□□□□□ -0.25
CRNDE-205ENST00000558952 IGLV4-3A0A075B6K6 122 aa13.5□□□□□ -0.25
CRNDE-205ENST00000558952 K7EMI3 77 aa13.49□□□□□ -0.25
CRNDE-205ENST00000558952 C2orf66Q6UXQ4 117 aa13.49□□□□□ -0.25
CRNDE-205ENST00000558952 Q6ZN92 141 aa13.49□□□□□ -0.25
CRNDE-205ENST00000558952 TEX43Q6ZNM6 134 aa13.49□□□□□ -0.25
CRNDE-205ENST00000558952 NXT2Q9NPJ8 142 aaKnown RBP13.49□□□□□ -0.25
CRNDE-205ENST00000558952 F8WDY8 70 aa13.48□□□□□ -0.25
CRNDE-205ENST00000558952 RPL18AQ02543 176 aaKnown RBP13.48□□□□□ -0.25
CRNDE-205ENST00000558952 C2orf88Q9BSF0 95 aa13.48□□□□□ -0.25
CRNDE-205ENST00000558952 SEC11CQ9BY50 192 aa13.48□□□□□ -0.25
CRNDE-205ENST00000558952 TRAV9-1A0A075B6T8 112 aa13.47□□□□□ -0.25
CRNDE-205ENST00000558952 S100PP25815 95 aa13.47□□□□□ -0.25
CRNDE-205ENST00000558952 PKHD1L1Q86WI1 4243 aa13.47□□□□□ -0.25
CRNDE-205ENST00000558952 NDUFA1O15239 70 aa13.46□□□□□ -0.25
CRNDE-205ENST00000558952 RNF151Q2KHN1 245 aa13.46□□□□□ -0.25
CRNDE-205ENST00000558952 LRP1Q07954 4544 aaKnown RBP13.46□□□□□ -0.26
CRNDE-205ENST00000558952 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.45□□□□□ -0.26
CRNDE-205ENST00000558952 G0S2P27469 103 aa13.45□□□□□ -0.26
CRNDE-205ENST00000558952 PRR3P79522 188 aaKnown RBP13.45□□□□□ -0.26
CRNDE-205ENST00000558952 LINC00242Q5T6M2 205 aa13.45□□□□□ -0.26
CRNDE-205ENST00000558952 COMMD7Q86VX2 200 aa13.45□□□□□ -0.26
CRNDE-205ENST00000558952 MRPL35Q9NZE8 188 aaKnown RBP13.45□□□□□ -0.26
CRNDE-205ENST00000558952 A0A087WZ39 114 aa13.44□□□□□ -0.26
CRNDE-205ENST00000558952 A0A0J9YXV3 536 aa13.44□□□□□ -0.26
CRNDE-205ENST00000558952 VCX2Q9H322 139 aa13.44□□□□□ -0.26
CRNDE-205ENST00000558952 FAT3Q8TDW7 4589 aa13.44□□□□□ -0.26
CRNDE-205ENST00000558952 NPSP0C0P6 89 aa13.43□□□□□ -0.26
CRNDE-205ENST00000558952 KIAA1644Q3SXP7 199 aa13.43□□□□□ -0.26
CRNDE-205ENST00000558952 UBE2D1P51668 147 aa13.42□□□□□ -0.26
CRNDE-205ENST00000558952 SERTAD4-AS1Q5TG53 156 aa13.42□□□□□ -0.26
CRNDE-205ENST00000558952 PAPPA-AS1Q5QFB9 102 aa13.41□□□□□ -0.26
CRNDE-205ENST00000558952 Q6ZRP5 223 aa13.4□□□□□ -0.26
CRNDE-205ENST00000558952 AMELXQ99217 191 aa13.4□□□□□ -0.26
CRNDE-205ENST00000558952 GNB1LQ9BYB4 327 aa13.4□□□□□ -0.26
CRNDE-205ENST00000558952 A0A1W2PNN7 141 aa13.39□□□□□ -0.27
CRNDE-205ENST00000558952 IGIPA6NJ69 53 aa13.39□□□□□ -0.27
CRNDE-205ENST00000558952 C9orf116Q5BN46 136 aaPredicted RBP13.39□□□□□ -0.27
CRNDE-205ENST00000558952 ZC2HC1BQ5TFG8 222 aa13.39□□□□□ -0.27
CRNDE-205ENST00000558952 UNQ6190/PRO20217Q6UXQ8 127 aa13.39□□□□□ -0.27
CRNDE-205ENST00000558952 COX19Q49B96 90 aa13.38□□□□□ -0.27
CRNDE-205ENST00000558952 C10orf25Q5T742 122 aa13.38□□□□□ -0.27
CRNDE-205ENST00000558952 LINC00173Q6ZV60 143 aa13.38□□□□□ -0.27
CRNDE-205ENST00000558952 LINC01561Q8N1V8 128 aa13.38□□□□□ -0.27
CRNDE-205ENST00000558952 C6orf48Q9UBA6 75 aa13.37□□□□□ -0.27
CRNDE-205ENST00000558952 TLX1NBP0CAT3 122 aa13.36□□□□□ -0.27
CRNDE-205ENST00000558952 SEC11AP67812 179 aa13.36□□□□□ -0.27
CRNDE-205ENST00000558952 KIAA0087Q14695 138 aa13.36□□□□□ -0.27
CRNDE-205ENST00000558952 RHEBQ15382 184 aa13.36□□□□□ -0.27
CRNDE-205ENST00000558952 TOMM6Q96B49 74 aa13.36□□□□□ -0.27
CRNDE-205ENST00000558952 TIMM17AQ99595 171 aa13.36□□□□□ -0.27
CRNDE-205ENST00000558952 PRSS2P07478 247 aa13.35□□□□□ -0.27
CRNDE-205ENST00000558952 PACRGQ96M98 296 aaPredicted RBP13.35□□□□□ -0.27
CRNDE-205ENST00000558952 RPS10P5Q9NQ39 176 aa13.35□□□□□ -0.27
CRNDE-205ENST00000558952 TRBV30A0A0K0K1B3 111 aa13.34□□□□□ -0.27
CRNDE-205ENST00000558952 MT-ND6P03923 174 aa13.34□□□□□ -0.27
CRNDE-205ENST00000558952 C10orf91Q5T1B1 145 aa13.34□□□□□ -0.27
CRNDE-205ENST00000558952 CARHSP1Q9Y2V2 147 aaKnown RBP13.34□□□□□ -0.27
CRNDE-205ENST00000558952 HERVK_113P63121 156 aa13.33□□□□□ -0.28
CRNDE-205ENST00000558952 GAGE2EQ4V326 116 aa13.33□□□□□ -0.28
CRNDE-205ENST00000558952 SPINK6Q6UWN8 80 aa13.33□□□□□ -0.28
CRNDE-205ENST00000558952 ERASQ7Z444 233 aa13.33□□□□□ -0.28
CRNDE-205ENST00000558952 FAM19A3Q7Z5A8 133 aa13.33□□□□□ -0.28
CRNDE-205ENST00000558952 SCGB3A1Q96QR1 104 aa13.33□□□□□ -0.28
CRNDE-205ENST00000558952 ALKBH7Q9BT30 221 aaPredicted RBP13.33□□□□□ -0.28
CRNDE-205ENST00000558952 GEMIN7Q9H840 131 aaKnown RBP13.33□□□□□ -0.28
CRNDE-205ENST00000558952 TOMM7Q9P0U1 55 aa13.33□□□□□ -0.28
CRNDE-205ENST00000558952 GAGE2DQ9UEU5 116 aa13.33□□□□□ -0.28
CRNDE-205ENST00000558952 LINC01549A6NIU2 74 aa13.32□□□□□ -0.28
CRNDE-205ENST00000558952 FABP9Q0Z7S8 132 aa13.32□□□□□ -0.28
CRNDE-205ENST00000558952 C2orf82Q6UX34 121 aa13.32□□□□□ -0.28
CRNDE-205ENST00000558952 MT1HL1P0DM35 61 aa13.31□□□□□ -0.28
CRNDE-205ENST00000558952 CKS1BP61024 79 aa13.31□□□□□ -0.28
CRNDE-205ENST00000558952 MRPL18Q9H0U6 180 aaKnown RBP13.31□□□□□ -0.28
CRNDE-205ENST00000558952 C6orf226Q5I0X4 101 aa13.3□□□□□ -0.28
CRNDE-205ENST00000558952 REG3GQ6UW15 175 aa13.3□□□□□ -0.28
CRNDE-205ENST00000558952 PHF5AQ7RTV0 110 aaKnown RBP13.3□□□□□ -0.28
CRNDE-205ENST00000558952 SMCO4Q9NRQ5 59 aa13.3□□□□□ -0.28
CRNDE-205ENST00000558952 FA2HQ7L5A8 372 aa13.29□□□□□ -0.28
CRNDE-205ENST00000558952 NDUFC2-KCTD14E9PQ53 114 aa13.28□□□□□ -0.28
CRNDE-205ENST00000558952 Q8IZM0 81 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms