RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 ADIRFQ15847 76 aa5.08□□□□□ -1.6
TRAF3-205ENST00000558700 CD164L2Q6UWJ8 174 aa5.08□□□□□ -1.6
TRAF3-205ENST00000558700 ZNF664Q8N3J9 261 aa5.08□□□□□ -1.6
TRAF3-205ENST00000558700 STPG4Q8N801 248 aa5.08□□□□□ -1.6
TRAF3-205ENST00000558700 PRR26Q8N8Z3 221 aa5.08□□□□□ -1.6
TRAF3-205ENST00000558700 NUP35Q8NFH5 326 aa5.08□□□□□ -1.6
TRAF3-205ENST00000558700 NAT8BQ9UHF3 227 aa5.08□□□□□ -1.6
TRAF3-205ENST00000558700 C1orf196B1AJZ1 125 aa5.07□□□□□ -1.6
TRAF3-205ENST00000558700 SMKR1H3BMG3 65 aa5.07□□□□□ -1.6
TRAF3-205ENST00000558700 TMEM241Q24JQ0 296 aa5.07□□□□□ -1.6
TRAF3-205ENST00000558700 CDC42SE2Q9NRR3 84 aa5.07□□□□□ -1.6
TRAF3-205ENST00000558700 NAT8Q9UHE5 227 aa5.07□□□□□ -1.6
TRAF3-205ENST00000558700 CSDC2Q9Y534 153 aaKnown RBP5.07□□□□□ -1.6
TRAF3-205ENST00000558700 HMCN2Q8NDA2 5059 aa5.06□□□□□ -1.6
TRAF3-205ENST00000558700 IGLV5-37A0A075B6J1 123 aa5.06□□□□□ -1.6
TRAF3-205ENST00000558700 A0A1B0GW15 77 aa5.06□□□□□ -1.6
TRAF3-205ENST00000558700 LINC00862A6NCI5 91 aa5.06□□□□□ -1.6
TRAF3-205ENST00000558700 COX7A2LO14548 114 aa5.06□□□□□ -1.6
TRAF3-205ENST00000558700 TCAPO15273 167 aa5.06□□□□□ -1.6
TRAF3-205ENST00000558700 MT1HL1P0DM35 61 aa5.06□□□□□ -1.6
TRAF3-205ENST00000558700 RPL23P62829 140 aaKnown RBP5.06□□□□□ -1.6
TRAF3-205ENST00000558700 SYCNQ0VAF6 134 aa5.06□□□□□ -1.6
TRAF3-205ENST00000558700 NRACQ8N912 160 aa5.06□□□□□ -1.6
TRAF3-205ENST00000558700 UBE2D4Q9Y2X8 147 aa5.06□□□□□ -1.6
TRAF3-205ENST00000558700 TRAV13-1A0A0B4J241 112 aa5.05□□□□□ -1.6
TRAF3-205ENST00000558700 SMIM27A0A1W2PRY6 76 aa5.05□□□□□ -1.6
TRAF3-205ENST00000558700 APOMO95445 188 aa5.05□□□□□ -1.6
TRAF3-205ENST00000558700 S100A8P05109 93 aa5.05□□□□□ -1.6
TRAF3-205ENST00000558700 RPL32P62910 135 aaKnown RBP5.05□□□□□ -1.6
TRAF3-205ENST00000558700 HBBP68871 147 aa5.05□□□□□ -1.6
TRAF3-205ENST00000558700 FAM104BQ5XKR9 115 aa5.05□□□□□ -1.6
TRAF3-205ENST00000558700 Q6ZUT4 128 aa5.05□□□□□ -1.6
TRAF3-205ENST00000558700 LINC00526Q96FQ7 95 aa5.05□□□□□ -1.6
TRAF3-205ENST00000558700 C20orf78Q9BR46 151 aa5.05□□□□□ -1.6
TRAF3-205ENST00000558700 TIMM21Q9BVV7 248 aa5.05□□□□□ -1.6
TRAF3-205ENST00000558700 IGLV4-69A0A075B6H9 119 aa5.04□□□□□ -1.6
TRAF3-205ENST00000558700 LOC107984640A0A0U1RRK4 108 aa5.04□□□□□ -1.6
TRAF3-205ENST00000558700 CKS2P33552 79 aa5.04□□□□□ -1.6
TRAF3-205ENST00000558700 PEA15Q15121 130 aa5.04□□□□□ -1.6
TRAF3-205ENST00000558700 MRPL51Q4U2R6 128 aaKnown RBP5.04□□□□□ -1.6
TRAF3-205ENST00000558700 RNASE13Q5GAN3 156 aaKnown RBP5.04□□□□□ -1.6
TRAF3-205ENST00000558700 CAMK2N2Q96S95 79 aa5.04□□□□□ -1.6
TRAF3-205ENST00000558700 SMIM2Q9BVW6 85 aa5.04□□□□□ -1.6
TRAF3-205ENST00000558700 SMDT1Q9H4I9 107 aa5.04□□□□□ -1.6
TRAF3-205ENST00000558700 TRBV24-1A0A075B6N3 115 aa5.03□□□□□ -1.6
TRAF3-205ENST00000558700 F8W036 122 aa5.03□□□□□ -1.6
TRAF3-205ENST00000558700 SPAG11BQ08648 103 aa5.03□□□□□ -1.6
TRAF3-205ENST00000558700 REG3GQ6UW15 175 aa5.03□□□□□ -1.6
TRAF3-205ENST00000558700 Q6ZRP5 223 aa5.03□□□□□ -1.6
TRAF3-205ENST00000558700 C2orf48Q96LS8 159 aa5.03□□□□□ -1.6
TRAF3-205ENST00000558700 SPANXA1Q9NS26 97 aa5.03□□□□□ -1.6
TRAF3-205ENST00000558700 D6R8Y8 96 aa5.02□□□□□ -1.61
TRAF3-205ENST00000558700 PPBPP02775 128 aa5.02□□□□□ -1.61
TRAF3-205ENST00000558700 RPL18AQ02543 176 aaKnown RBP5.02□□□□□ -1.61
TRAF3-205ENST00000558700 MRPL54Q6P161 138 aaKnown RBP5.02□□□□□ -1.61
TRAF3-205ENST00000558700 SPINK6Q6UWN8 80 aa5.02□□□□□ -1.61
TRAF3-205ENST00000558700 OR10D4PQ8NGN7 298 aa5.02□□□□□ -1.61
TRAF3-205ENST00000558700 LINC01600Q96MT4 127 aa5.02□□□□□ -1.61
TRAF3-205ENST00000558700 A0A1B0GXF2 115 aa5.01□□□□□ -1.61
TRAF3-205ENST00000558700 IFITM10A6NMD0 228 aa5.01□□□□□ -1.61
TRAF3-205ENST00000558700 C9JQL5 133 aa5.01□□□□□ -1.61
TRAF3-205ENST00000558700 F8WDY8 70 aa5.01□□□□□ -1.61
TRAF3-205ENST00000558700 NPYP01303 97 aa5.01□□□□□ -1.61
TRAF3-205ENST00000558700 RPL39P62891 51 aaKnown RBP5.01□□□□□ -1.61
TRAF3-205ENST00000558700 MRPS36P82909 103 aaKnown RBP5.01□□□□□ -1.61
TRAF3-205ENST00000558700 ATP5L2Q7Z4Y8 100 aa5.01□□□□□ -1.61
TRAF3-205ENST00000558700 C5orf38Q86SI9 138 aa5.01□□□□□ -1.61
TRAF3-205ENST00000558700 ORAOV1Q8WV07 137 aa5.01□□□□□ -1.61
TRAF3-205ENST00000558700 TGIF2-C20orf24A0A0A6YYL0 155 aa5□□□□□ -1.61
TRAF3-205ENST00000558700 A0A1B0GVG6 124 aa5□□□□□ -1.61
TRAF3-205ENST00000558700 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5□□□□□ -1.61
TRAF3-205ENST00000558700 IFI27P40305 119 aaPredicted RBP5□□□□□ -1.61
TRAF3-205ENST00000558700 ORMDL3Q8N138 153 aa5□□□□□ -1.61
TRAF3-205ENST00000558700 A0A0J9YXV3 536 aa4.99□□□□□ -1.61
TRAF3-205ENST00000558700 NDUFA1O15239 70 aa4.99□□□□□ -1.61
TRAF3-205ENST00000558700 MT-ND6P03923 174 aa4.99□□□□□ -1.61
TRAF3-205ENST00000558700 RAB5AP20339 215 aa4.99□□□□□ -1.61
TRAF3-205ENST00000558700 C9orf116Q5BN46 136 aaPredicted RBP4.99□□□□□ -1.61
TRAF3-205ENST00000558700 IMMP2LQ96T52 175 aa4.99□□□□□ -1.61
TRAF3-205ENST00000558700 ALKBH7Q9BT30 221 aaPredicted RBP4.99□□□□□ -1.61
TRAF3-205ENST00000558700 MRPL35Q9NZE8 188 aaKnown RBP4.99□□□□□ -1.61
TRAF3-205ENST00000558700 IGHV3OR16-9A0A0B4J2B5 98 aa4.98□□□□□ -1.61
TRAF3-205ENST00000558700 TMEM136Q6ZRR5 245 aa4.98□□□□□ -1.61
TRAF3-205ENST00000558700 PRELID3AQ96N28 172 aa4.98□□□□□ -1.61
TRAF3-205ENST00000558700 LAMTOR2Q9Y2Q5 125 aa4.98□□□□□ -1.61
TRAF3-205ENST00000558700 A0A1W2PNN7 141 aa4.97□□□□□ -1.61
TRAF3-205ENST00000558700 RPL24P83731 157 aaKnown RBP4.97□□□□□ -1.61
TRAF3-205ENST00000558700 FAM104AQ969W3 186 aa4.97□□□□□ -1.61
TRAF3-205ENST00000558700 TMEM141Q96I45 108 aa4.97□□□□□ -1.61
TRAF3-205ENST00000558700 OPRPNQ99935 248 aaPredicted RBP4.97□□□□□ -1.61
TRAF3-205ENST00000558700 MAP1LC3AQ9H492 121 aa4.97□□□□□ -1.61
TRAF3-205ENST00000558700 PYGO1Q9Y3Y4 419 aa4.97□□□□□ -1.61
TRAF3-205ENST00000558700 IGLV4-3A0A075B6K6 122 aa4.96□□□□□ -1.62
TRAF3-205ENST00000558700 IGLV5-45A0A087WSX0 123 aa4.96□□□□□ -1.62
TRAF3-205ENST00000558700 A0A087WZ39 114 aa4.96□□□□□ -1.62
TRAF3-205ENST00000558700 TLX1NBP0CAT3 122 aa4.96□□□□□ -1.62
TRAF3-205ENST00000558700 SRSF9Q13242 221 aaKnown RBP eCLIP4.96□□□□□ -1.62
TRAF3-205ENST00000558700 Q6ZN92 141 aa4.96□□□□□ -1.62
TRAF3-205ENST00000558700 TEX43Q6ZNM6 134 aa4.96□□□□□ -1.62
TRAF3-205ENST00000558700 C2orf88Q9BSF0 95 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms