RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 F5H697 171 aa7.55□□□□□ -1.2
RTN1-208ENST00000557422 HSBP1O75506 76 aa7.55□□□□□ -1.2
RTN1-208ENST00000557422 FABP4P15090 132 aa7.55□□□□□ -1.2
RTN1-208ENST00000557422 PDZD11Q5EBL8 140 aa7.55□□□□□ -1.2
RTN1-208ENST00000557422 C15orf56Q8N910 161 aa7.55□□□□□ -1.2
RTN1-208ENST00000557422 C20orf78Q9BR46 151 aa7.55□□□□□ -1.2
RTN1-208ENST00000557422 MAP1LC3AQ9H492 121 aa7.55□□□□□ -1.2
RTN1-208ENST00000557422 A0A1B0GUV1 79 aa7.54□□□□□ -1.2
RTN1-208ENST00000557422 NUPR1O60356 82 aa7.54□□□□□ -1.2
RTN1-208ENST00000557422 TNFRSF6BO95407 300 aa7.54□□□□□ -1.2
RTN1-208ENST00000557422 SMIM6P0DI80 62 aa7.54□□□□□ -1.2
RTN1-208ENST00000557422 FA2HQ7L5A8 372 aa7.54□□□□□ -1.2
RTN1-208ENST00000557422 NXT2Q9NPJ8 142 aaKnown RBP7.54□□□□□ -1.2
RTN1-208ENST00000557422 LINC01546A6NGU7 62 aa7.53□□□□□ -1.2
RTN1-208ENST00000557422 K7EMI3 77 aa7.53□□□□□ -1.2
RTN1-208ENST00000557422 NPYP01303 97 aa7.53□□□□□ -1.2
RTN1-208ENST00000557422 AMTP48728 403 aa7.53□□□□□ -1.2
RTN1-208ENST00000557422 RPL32P62910 135 aaKnown RBP7.53□□□□□ -1.2
RTN1-208ENST00000557422 RNASEKQ6P5S7 137 aaKnown RBP7.53□□□□□ -1.2
RTN1-208ENST00000557422 CFAP161Q6P656 301 aa7.53□□□□□ -1.2
RTN1-208ENST00000557422 NRACQ8N912 160 aa7.53□□□□□ -1.2
RTN1-208ENST00000557422 OR10D4PQ8NGN7 298 aa7.53□□□□□ -1.2
RTN1-208ENST00000557422 A0A096LNI7 61 aa7.52□□□□□ -1.21
RTN1-208ENST00000557422 HIGD2BQ4VC39 106 aa7.52□□□□□ -1.21
RTN1-208ENST00000557422 Q6ZRP5 223 aa7.52□□□□□ -1.21
RTN1-208ENST00000557422 Q8N8P6 123 aa7.52□□□□□ -1.21
RTN1-208ENST00000557422 URB1-AS1Q96HZ7 61 aa7.52□□□□□ -1.21
RTN1-208ENST00000557422 KRTAP9-6A0A140TA67 174 aa7.51□□□□□ -1.21
RTN1-208ENST00000557422 GAGE12HA6NDE8 117 aa7.51□□□□□ -1.21
RTN1-208ENST00000557422 SMKR1H3BMG3 65 aa7.51□□□□□ -1.21
RTN1-208ENST00000557422 H7C1H1 209 aa7.51□□□□□ -1.21
RTN1-208ENST00000557422 NCR2O95944 276 aa7.51□□□□□ -1.21
RTN1-208ENST00000557422 MGPP08493 103 aa7.51□□□□□ -1.21
RTN1-208ENST00000557422 IFI27P40305 119 aaPredicted RBP7.51□□□□□ -1.21
RTN1-208ENST00000557422 LINC00518Q8N0U6 118 aa7.51□□□□□ -1.21
RTN1-208ENST00000557422 TMEM243Q9BU79 118 aa7.51□□□□□ -1.21
RTN1-208ENST00000557422 TRBV6-5A0A0K0K1A5 114 aa7.5□□□□□ -1.21
RTN1-208ENST00000557422 LOC389332A0A1B0GUA5 103 aa7.5□□□□□ -1.21
RTN1-208ENST00000557422 SUMO2P61956 95 aaKnown RBP7.5□□□□□ -1.21
RTN1-208ENST00000557422 JOSD1Q15040 202 aaPredicted RBP7.5□□□□□ -1.21
RTN1-208ENST00000557422 SUMO4Q6EEV6 95 aa7.5□□□□□ -1.21
RTN1-208ENST00000557422 TRAV26-2A0A0B4J265 109 aa7.49□□□□□ -1.21
RTN1-208ENST00000557422 M0QY20 66 aa7.49□□□□□ -1.21
RTN1-208ENST00000557422 TCAPO15273 167 aa7.49□□□□□ -1.21
RTN1-208ENST00000557422 G0S2P27469 103 aa7.49□□□□□ -1.21
RTN1-208ENST00000557422 ST20Q9HBF5 79 aa7.49□□□□□ -1.21
RTN1-208ENST00000557422 LINC00474Q9P2X8 69 aa7.49□□□□□ -1.21
RTN1-208ENST00000557422 HSPB8Q9UJY1 196 aa7.49□□□□□ -1.21
RTN1-208ENST00000557422 GVQW2A0A096LPI5 108 aaPredicted RBP7.48□□□□□ -1.21
RTN1-208ENST00000557422 LINC01549A6NIU2 74 aa7.48□□□□□ -1.21
RTN1-208ENST00000557422 VCYO14598 125 aa7.48□□□□□ -1.21
RTN1-208ENST00000557422 LEPROTL1O95214 131 aa7.48□□□□□ -1.21
RTN1-208ENST00000557422 HBDP02042 147 aa7.48□□□□□ -1.21
RTN1-208ENST00000557422 MUC2Q02817 5179 aa7.48□□□□□ -1.21
RTN1-208ENST00000557422 ORMDL2Q53FV1 153 aa7.48□□□□□ -1.21
RTN1-208ENST00000557422 PYY3Q5JQD4 70 aa7.48□□□□□ -1.21
RTN1-208ENST00000557422 FAM19A2Q8N3H0 131 aa7.48□□□□□ -1.21
RTN1-208ENST00000557422 SMIM2Q9BVW6 85 aa7.48□□□□□ -1.21
RTN1-208ENST00000557422 NIT2Q9NQR4 276 aa7.48□□□□□ -1.21
RTN1-208ENST00000557422 FCER1GP30273 86 aa7.47□□□□□ -1.21
RTN1-208ENST00000557422 POLR2KP53803 58 aaKnown RBP7.47□□□□□ -1.21
RTN1-208ENST00000557422 C12orf57Q99622 126 aa7.47□□□□□ -1.21
RTN1-208ENST00000557422 IGKV3OR2-268A0A0C4DH90 116 aa7.46□□□□□ -1.22
RTN1-208ENST00000557422 A0A0U1RQV1 116 aa7.46□□□□□ -1.22
RTN1-208ENST00000557422 CHCHD10Q8WYQ3 142 aaPredicted RBP7.46□□□□□ -1.22
RTN1-208ENST00000557422 TRBV27A0A0K0K1C4 114 aa7.45□□□□□ -1.22
RTN1-208ENST00000557422 UBE2L6O14933 153 aa7.45□□□□□ -1.22
RTN1-208ENST00000557422 ZNF664Q8N3J9 261 aa7.45□□□□□ -1.22
RTN1-208ENST00000557422 RPL39LQ96EH5 51 aaKnown RBP7.45□□□□□ -1.22
RTN1-208ENST00000557422 KIR2DL4Q99706 377 aa7.45□□□□□ -1.22
RTN1-208ENST00000557422 MAP1LC3CQ9BXW4 147 aa7.45□□□□□ -1.22
RTN1-208ENST00000557422 PSORS1C2Q9UIG4 136 aa7.45□□□□□ -1.22
RTN1-208ENST00000557422 SDHAF1A6NFY7 115 aa7.44□□□□□ -1.22
RTN1-208ENST00000557422 SCGB1D1O95968 90 aa7.44□□□□□ -1.22
RTN1-208ENST00000557422 C3orf79P0CE67 100 aa7.44□□□□□ -1.22
RTN1-208ENST00000557422 PET117Q6UWS5 81 aa7.44□□□□□ -1.22
RTN1-208ENST00000557422 PKIGQ9Y2B9 76 aa7.44□□□□□ -1.22
RTN1-208ENST00000557422 A0A096LNJ9 63 aa7.43□□□□□ -1.22
RTN1-208ENST00000557422 C20orf202A1L168 122 aa7.43□□□□□ -1.22
RTN1-208ENST00000557422 I3L3M4 83 aa7.43□□□□□ -1.22
RTN1-208ENST00000557422 ATP5LO75964 103 aa7.43□□□□□ -1.22
RTN1-208ENST00000557422 KRTDAPP60985 99 aa7.43□□□□□ -1.22
RTN1-208ENST00000557422 S100A12P80511 92 aa7.43□□□□□ -1.22
RTN1-208ENST00000557422 PMCHL1Q16048 86 aa7.43□□□□□ -1.22
RTN1-208ENST00000557422 PRR26Q8N8Z3 221 aa7.43□□□□□ -1.22
RTN1-208ENST00000557422 LINC00526Q96FQ7 95 aa7.43□□□□□ -1.22
RTN1-208ENST00000557422 SYS1-DBNDD2H3BUS1 97 aa7.42□□□□□ -1.22
RTN1-208ENST00000557422 FOXI1Q12951 378 aa7.42□□□□□ -1.22
RTN1-208ENST00000557422 COTL1Q14019 142 aa7.42□□□□□ -1.22
RTN1-208ENST00000557422 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
RTN1-208ENST00000557422 CARD19Q96LW7 228 aa7.42□□□□□ -1.22
RTN1-208ENST00000557422 TOMM6Q96B49 74 aa7.41□□□□□ -1.22
RTN1-208ENST00000557422 IFI27L1Q96BM0 104 aa7.41□□□□□ -1.22
RTN1-208ENST00000557422 A0A1W2PNN7 141 aa7.4□□□□□ -1.22
RTN1-208ENST00000557422 PTTG1IPP53801 180 aa7.4□□□□□ -1.22
RTN1-208ENST00000557422 TEX43Q6ZNM6 134 aa7.4□□□□□ -1.22
RTN1-208ENST00000557422 IGHV1-58A0A0C4DH39 117 aa7.39□□□□□ -1.23
RTN1-208ENST00000557422 SYCNQ0VAF6 134 aa7.39□□□□□ -1.23
RTN1-208ENST00000557422 PRR4Q16378 134 aa7.39□□□□□ -1.23
RTN1-208ENST00000557422 LINC01545Q5VT33 79 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms