RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 CHAC1Q9BUX1 264 aa8.98□□□□□ -0.97
VPS33B-206ENST00000557358 SPANXA1Q9NS26 97 aa8.98□□□□□ -0.97
VPS33B-206ENST00000557358 TMA7Q9Y2S6 64 aaKnown RBP8.98□□□□□ -0.97
VPS33B-206ENST00000557358 IGHV1-58A0A0C4DH39 117 aa8.97□□□□□ -0.97
VPS33B-206ENST00000557358 PLA2G1BP04054 148 aaKnown RBP8.97□□□□□ -0.97
VPS33B-206ENST00000557358 G0S2P27469 103 aa8.97□□□□□ -0.97
VPS33B-206ENST00000557358 DPH3Q96FX2 82 aa8.97□□□□□ -0.97
VPS33B-206ENST00000557358 TRAV13-1A0A0B4J241 112 aa8.96□□□□□ -0.98
VPS33B-206ENST00000557358 FOXI1Q12951 378 aa8.96□□□□□ -0.98
VPS33B-206ENST00000557358 ZNF561-AS1K7EIQ3 104 aa8.95□□□□□ -0.98
VPS33B-206ENST00000557358 COX7A2LO14548 114 aa8.95□□□□□ -0.98
VPS33B-206ENST00000557358 NUPR1O60356 82 aa8.95□□□□□ -0.98
VPS33B-206ENST00000557358 APOMO95445 188 aa8.95□□□□□ -0.98
VPS33B-206ENST00000557358 HBDP02042 147 aa8.95□□□□□ -0.98
VPS33B-206ENST00000557358 PMCHL1Q16048 86 aa8.95□□□□□ -0.98
VPS33B-206ENST00000557358 HIGD2BQ4VC39 106 aa8.95□□□□□ -0.98
VPS33B-206ENST00000557358 KRTAP4-5Q9BYR2 181 aa8.95□□□□□ -0.98
VPS33B-206ENST00000557358 CYSLTR1Q9Y271 337 aa8.95□□□□□ -0.98
VPS33B-206ENST00000557358 GVQW2A0A096LPI5 108 aaPredicted RBP8.94□□□□□ -0.98
VPS33B-206ENST00000557358 RPL39P62891 51 aaKnown RBP8.94□□□□□ -0.98
VPS33B-206ENST00000557358 C2orf66Q6UXQ4 117 aa8.94□□□□□ -0.98
VPS33B-206ENST00000557358 SCXQ7RTU7 201 aa8.94□□□□□ -0.98
VPS33B-206ENST00000557358 FAM19A2Q8N3H0 131 aa8.94□□□□□ -0.98
VPS33B-206ENST00000557358 C15orf56Q8N910 161 aa8.94□□□□□ -0.98
VPS33B-206ENST00000557358 A0A096LNJ9 63 aa8.93□□□□□ -0.98
VPS33B-206ENST00000557358 LINC01549A6NIU2 74 aa8.93□□□□□ -0.98
VPS33B-206ENST00000557358 INAFM2P0DMQ5 153 aa8.93□□□□□ -0.98
VPS33B-206ENST00000557358 MRPS36P82909 103 aaKnown RBP8.93□□□□□ -0.98
VPS33B-206ENST00000557358 RNASE13Q5GAN3 156 aaKnown RBP8.93□□□□□ -0.98
VPS33B-206ENST00000557358 Q6ZN92 141 aa8.93□□□□□ -0.98
VPS33B-206ENST00000557358 Q6ZUT4 128 aa8.93□□□□□ -0.98
VPS33B-206ENST00000557358 LINC00528Q8N1L1 170 aa8.93□□□□□ -0.98
VPS33B-206ENST00000557358 TOMM6Q96B49 74 aa8.93□□□□□ -0.98
VPS33B-206ENST00000557358 IFITM10A6NMD0 228 aa8.92□□□□□ -0.98
VPS33B-206ENST00000557358 SNRPEP62304 92 aaKnown RBP8.92□□□□□ -0.98
VPS33B-206ENST00000557358 PDZD11Q5EBL8 140 aa8.92□□□□□ -0.98
VPS33B-206ENST00000557358 CIRBP-AS1Q8TBR5 109 aa8.92□□□□□ -0.98
VPS33B-206ENST00000557358 PCLOQ9Y6V0 5065 aa8.92□□□□□ -0.98
VPS33B-206ENST00000557358 PAPPA-AS1Q5QFB9 102 aa8.91□□□□□ -0.98
VPS33B-206ENST00000557358 SDIM1Q6ZPB5 146 aa8.91□□□□□ -0.98
VPS33B-206ENST00000557358 HIST3H2BBQ8N257 126 aa8.91□□□□□ -0.98
VPS33B-206ENST00000557358 C2orf88Q9BSF0 95 aa8.91□□□□□ -0.98
VPS33B-206ENST00000557358 PYGO1Q9Y3Y4 419 aa8.91□□□□□ -0.98
VPS33B-206ENST00000557358 C5orf52A6NGY3 159 aa8.9□□□□□ -0.98
VPS33B-206ENST00000557358 TEX43Q6ZNM6 134 aa8.9□□□□□ -0.98
VPS33B-206ENST00000557358 TMEM141Q96I45 108 aa8.9□□□□□ -0.98
VPS33B-206ENST00000557358 CARD19Q96LW7 228 aa8.9□□□□□ -0.98
VPS33B-206ENST00000557358 LEPROTL1O95214 131 aa8.89□□□□□ -0.99
VPS33B-206ENST00000557358 S100A2P29034 98 aa8.89□□□□□ -0.99
VPS33B-206ENST00000557358 ERASQ7Z444 233 aa8.89□□□□□ -0.99
VPS33B-206ENST00000557358 SCGB3A1Q96QR1 104 aa8.89□□□□□ -0.99
VPS33B-206ENST00000557358 TIMM17AQ99595 171 aa8.89□□□□□ -0.99
VPS33B-206ENST00000557358 LINC00474Q9P2X8 69 aa8.89□□□□□ -0.99
VPS33B-206ENST00000557358 ATP5LO75964 103 aa8.88□□□□□ -0.99
VPS33B-206ENST00000557358 SYCNQ0VAF6 134 aa8.88□□□□□ -0.99
VPS33B-206ENST00000557358 C5orf38Q86SI9 138 aa8.88□□□□□ -0.99
VPS33B-206ENST00000557358 PACRGQ96M98 296 aaPredicted RBP8.88□□□□□ -0.99
VPS33B-206ENST00000557358 KRTAP17-1Q9BYP8 105 aa8.88□□□□□ -0.99
VPS33B-206ENST00000557358 VCX2Q9H322 139 aa8.88□□□□□ -0.99
VPS33B-206ENST00000557358 IGIPA6NJ69 53 aa8.87□□□□□ -0.99
VPS33B-206ENST00000557358 SLPIP03973 132 aa8.87□□□□□ -0.99
VPS33B-206ENST00000557358 NPSP0C0P6 89 aa8.87□□□□□ -0.99
VPS33B-206ENST00000557358 FABP4P15090 132 aa8.87□□□□□ -0.99
VPS33B-206ENST00000557358 COX6A2Q02221 97 aa8.87□□□□□ -0.99
VPS33B-206ENST00000557358 CAMK2N2Q96S95 79 aa8.87□□□□□ -0.99
VPS33B-206ENST00000557358 HSPB8Q9UJY1 196 aa8.87□□□□□ -0.99
VPS33B-206ENST00000557358 IGLV4-3A0A075B6K6 122 aa8.86□□□□□ -0.99
VPS33B-206ENST00000557358 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.86□□□□□ -0.99
VPS33B-206ENST00000557358 OR10D4PQ8NGN7 298 aa8.86□□□□□ -0.99
VPS33B-206ENST00000557358 OPRPNQ99935 248 aaPredicted RBP8.86□□□□□ -0.99
VPS33B-206ENST00000557358 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.86□□□□□ -0.99
VPS33B-206ENST00000557358 ABCA13Q86UQ4 5058 aa8.85□□□□□ -0.99
VPS33B-206ENST00000557358 IGLV4-69A0A075B6H9 119 aa8.85□□□□□ -0.99
VPS33B-206ENST00000557358 IGKV2-24A0A0C4DH68 120 aa8.85□□□□□ -0.99
VPS33B-206ENST00000557358 F8WDY8 70 aa8.85□□□□□ -0.99
VPS33B-206ENST00000557358 SEC11AP67812 179 aa8.85□□□□□ -0.99
VPS33B-206ENST00000557358 SPAG11BQ08648 103 aa8.85□□□□□ -0.99
VPS33B-206ENST00000557358 MAJINQ3KP22 176 aa8.85□□□□□ -0.99
VPS33B-206ENST00000557358 LINC00173Q6ZV60 143 aa8.85□□□□□ -0.99
VPS33B-206ENST00000557358 IFI27L1Q96BM0 104 aa8.85□□□□□ -0.99
VPS33B-206ENST00000557358 C2orf48Q96LS8 159 aa8.85□□□□□ -0.99
VPS33B-206ENST00000557358 HIST1H2BLQ99880 126 aa8.85□□□□□ -0.99
VPS33B-206ENST00000557358 DNAH8Q96JB1 4490 aa8.84□□□□□ -0.99
VPS33B-206ENST00000557358 RPL37AP61513 92 aaKnown RBP8.84□□□□□ -0.99
VPS33B-206ENST00000557358 CIRBPQ14011 172 aaKnown RBP8.84□□□□□ -0.99
VPS33B-206ENST00000557358 C7orf33Q8WU49 177 aa8.84□□□□□ -0.99
VPS33B-206ENST00000557358 ORAOV1Q8WV07 137 aa8.84□□□□□ -0.99
VPS33B-206ENST00000557358 LINC00526Q96FQ7 95 aa8.84□□□□□ -0.99
VPS33B-206ENST00000557358 LOC107984640A0A0U1RRK4 108 aa8.83□□□□□ -1
VPS33B-206ENST00000557358 SPACA4Q8TDM5 124 aa8.83□□□□□ -1
VPS33B-206ENST00000557358 FAM104AQ969W3 186 aa8.83□□□□□ -1
VPS33B-206ENST00000557358 MAP1LC3CQ9BXW4 147 aa8.83□□□□□ -1
VPS33B-206ENST00000557358 A0A087WYN8 130 aa8.82□□□□□ -1
VPS33B-206ENST00000557358 IGHV3OR16-9A0A0B4J2B5 98 aa8.82□□□□□ -1
VPS33B-206ENST00000557358 NDUFA1O15239 70 aa8.82□□□□□ -1
VPS33B-206ENST00000557358 CHTF8P0CG12 524 aa8.82□□□□□ -1
VPS33B-206ENST00000557358 AMELXQ99217 191 aa8.82□□□□□ -1
VPS33B-206ENST00000557358 FAT1Q14517 4588 aa8.81□□□□□ -1
VPS33B-206ENST00000557358 PMVKQ15126 192 aa8.81□□□□□ -1
VPS33B-206ENST00000557358 GEMIN7Q9H840 131 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms