RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 ADIRFQ15847 76 aa3.41□□□□□ -1.86
PRPF39-211ENST00000556782 MRPL52Q86TS9 123 aaKnown RBP3.41□□□□□ -1.86
PRPF39-211ENST00000556782 SPACA4Q8TDM5 124 aa3.41□□□□□ -1.86
PRPF39-211ENST00000556782 NAT8Q9UHE5 227 aa3.41□□□□□ -1.86
PRPF39-211ENST00000556782 NAT8BQ9UHF3 227 aa3.41□□□□□ -1.86
PRPF39-211ENST00000556782 SMIM27A0A1W2PRY6 76 aa3.4□□□□□ -1.87
PRPF39-211ENST00000556782 VCYO14598 125 aa3.4□□□□□ -1.87
PRPF39-211ENST00000556782 PPP1R2P9O14990 202 aa3.4□□□□□ -1.87
PRPF39-211ENST00000556782 CCL25O15444 150 aa3.4□□□□□ -1.87
PRPF39-211ENST00000556782 PPP1R17O96001 155 aa3.4□□□□□ -1.87
PRPF39-211ENST00000556782 OXTP01178 125 aa3.4□□□□□ -1.87
PRPF39-211ENST00000556782 FCER1GP30273 86 aa3.4□□□□□ -1.87
PRPF39-211ENST00000556782 XCL1P47992 114 aa3.4□□□□□ -1.87
PRPF39-211ENST00000556782 PEA15Q15121 130 aa3.4□□□□□ -1.87
PRPF39-211ENST00000556782 MRPL51Q4U2R6 128 aaKnown RBP3.4□□□□□ -1.87
PRPF39-211ENST00000556782 FAM104BQ5XKR9 115 aa3.4□□□□□ -1.87
PRPF39-211ENST00000556782 ZNF664Q8N3J9 261 aa3.4□□□□□ -1.87
PRPF39-211ENST00000556782 SMDT1Q9H4I9 107 aa3.4□□□□□ -1.87
PRPF39-211ENST00000556782 CDC42SE2Q9NRR3 84 aa3.4□□□□□ -1.87
PRPF39-211ENST00000556782 PLAC8Q9NZF1 115 aa3.4□□□□□ -1.87
PRPF39-211ENST00000556782 FLG2Q5D862 2391 aaPredicted RBP3.4□□□□□ -1.87
PRPF39-211ENST00000556782 IGHV1-58A0A0C4DH39 117 aa3.39□□□□□ -1.87
PRPF39-211ENST00000556782 A0A1B0GW15 77 aa3.39□□□□□ -1.87
PRPF39-211ENST00000556782 CAMPP49913 170 aa3.39□□□□□ -1.87
PRPF39-211ENST00000556782 COX6A2Q02221 97 aa3.39□□□□□ -1.87
PRPF39-211ENST00000556782 SS18Q15532 418 aa3.39□□□□□ -1.87
PRPF39-211ENST00000556782 SERTAD4-AS1Q5TG53 156 aa3.39□□□□□ -1.87
PRPF39-211ENST00000556782 CD164L2Q6UWJ8 174 aa3.39□□□□□ -1.87
PRPF39-211ENST00000556782 DPH3Q96FX2 82 aa3.39□□□□□ -1.87
PRPF39-211ENST00000556782 KIR2DL4Q99706 377 aa3.39□□□□□ -1.87
PRPF39-211ENST00000556782 UBE2D4Q9Y2X8 147 aa3.39□□□□□ -1.87
PRPF39-211ENST00000556782 CSDC2Q9Y534 153 aaKnown RBP3.39□□□□□ -1.87
PRPF39-211ENST00000556782 HMCN2Q8NDA2 5059 aa3.39□□□□□ -1.87
PRPF39-211ENST00000556782 TRBV24-1A0A075B6N3 115 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 A0A096LNI7 61 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 IGKV2-24A0A0C4DH68 120 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 A0A1B0GXF2 115 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 LINC00862A6NCI5 91 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 C1orf196B1AJZ1 125 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 PHOX2AO14813 284 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 S100A8P05109 93 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 CKS2P33552 79 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 KRTAP10-12P60413 245 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 RPL32P62910 135 aaKnown RBP3.38□□□□□ -1.87
PRPF39-211ENST00000556782 HBBP68871 147 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 SMAGPQ0VAQ4 97 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 MAJINQ3KP22 176 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 RNASE13Q5GAN3 156 aaKnown RBP3.38□□□□□ -1.87
PRPF39-211ENST00000556782 MRPL54Q6P161 138 aaKnown RBP3.38□□□□□ -1.87
PRPF39-211ENST00000556782 Q6ZUT4 128 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 LINC00526Q96FQ7 95 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 CARD19Q96LW7 228 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 C20orf78Q9BR46 151 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 TIMM21Q9BVV7 248 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 PKIGQ9Y2B9 76 aa3.38□□□□□ -1.87
PRPF39-211ENST00000556782 TRAV13-1A0A0B4J241 112 aa3.37□□□□□ -1.87
PRPF39-211ENST00000556782 D6R8Y8 96 aa3.37□□□□□ -1.87
PRPF39-211ENST00000556782 F8W036 122 aa3.37□□□□□ -1.87
PRPF39-211ENST00000556782 COX7A2LO14548 114 aa3.37□□□□□ -1.87
PRPF39-211ENST00000556782 TCAPO15273 167 aa3.37□□□□□ -1.87
PRPF39-211ENST00000556782 NPYP01303 97 aa3.37□□□□□ -1.87
PRPF39-211ENST00000556782 Q6ZRU5 148 aa3.37□□□□□ -1.87
PRPF39-211ENST00000556782 ATP5L2Q7Z4Y8 100 aa3.37□□□□□ -1.87
PRPF39-211ENST00000556782 STPG4Q8N801 248 aa3.37□□□□□ -1.87
PRPF39-211ENST00000556782 C7orf33Q8WU49 177 aa3.37□□□□□ -1.87
PRPF39-211ENST00000556782 TMEM18Q96B42 140 aa3.37□□□□□ -1.87
PRPF39-211ENST00000556782 SMIM2Q9BVW6 85 aa3.37□□□□□ -1.87
PRPF39-211ENST00000556782 LINC00474Q9P2X8 69 aa3.37□□□□□ -1.87
PRPF39-211ENST00000556782 IGLV4-69A0A075B6H9 119 aa3.36□□□□□ -1.87
PRPF39-211ENST00000556782 PPBPP02775 128 aa3.36□□□□□ -1.87
PRPF39-211ENST00000556782 RPL39P62891 51 aaKnown RBP3.36□□□□□ -1.87
PRPF39-211ENST00000556782 SYCNQ0VAF6 134 aa3.36□□□□□ -1.87
PRPF39-211ENST00000556782 FAM104AQ969W3 186 aa3.36□□□□□ -1.87
PRPF39-211ENST00000556782 SPANXA1Q9NS26 97 aa3.36□□□□□ -1.87
PRPF39-211ENST00000556782 LOC107984640A0A0U1RRK4 108 aa3.35□□□□□ -1.87
PRPF39-211ENST00000556782 APOMO95445 188 aa3.35□□□□□ -1.87
PRPF39-211ENST00000556782 PRSS2P07478 247 aa3.35□□□□□ -1.87
PRPF39-211ENST00000556782 MT1HL1P0DM35 61 aa3.35□□□□□ -1.87
PRPF39-211ENST00000556782 PRR3P79522 188 aaKnown RBP3.35□□□□□ -1.87
PRPF39-211ENST00000556782 MRPS36P82909 103 aaKnown RBP3.35□□□□□ -1.87
PRPF39-211ENST00000556782 PNRC1Q12796 327 aaPredicted RBP3.35□□□□□ -1.87
PRPF39-211ENST00000556782 TMEM136Q6ZRR5 245 aa3.35□□□□□ -1.87
PRPF39-211ENST00000556782 C5orf38Q86SI9 138 aa3.35□□□□□ -1.87
PRPF39-211ENST00000556782 ORMDL3Q8N138 153 aa3.35□□□□□ -1.87
PRPF39-211ENST00000556782 C2orf48Q96LS8 159 aa3.35□□□□□ -1.87
PRPF39-211ENST00000556782 PRELID3AQ96N28 172 aa3.35□□□□□ -1.87
PRPF39-211ENST00000556782 CAMK2N2Q96S95 79 aa3.35□□□□□ -1.87
PRPF39-211ENST00000556782 IGHV3OR16-9A0A0B4J2B5 98 aa3.34□□□□□ -1.87
PRPF39-211ENST00000556782 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-211ENST00000556782 RAB14P61106 215 aa3.34□□□□□ -1.87
PRPF39-211ENST00000556782 SPAG11BQ08648 103 aa3.34□□□□□ -1.87
PRPF39-211ENST00000556782 OR10D4PQ8NGN7 298 aa3.34□□□□□ -1.87
PRPF39-211ENST00000556782 OPRPNQ99935 248 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-211ENST00000556782 TNXBP22105 4242 aa3.33□□□□□ -1.88
PRPF39-211ENST00000556782 IGLV4-3A0A075B6K6 122 aa3.33□□□□□ -1.88
PRPF39-211ENST00000556782 MT-ND4LP03901 98 aa3.33□□□□□ -1.88
PRPF39-211ENST00000556782 RAB5AP20339 215 aa3.33□□□□□ -1.88
PRPF39-211ENST00000556782 IFI27P40305 119 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-211ENST00000556782 RPL18AQ02543 176 aaKnown RBP3.33□□□□□ -1.88
PRPF39-211ENST00000556782 GAGE2BQ13066 116 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms