RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 CARD19Q96LW7 228 aa6.61□□□□□ -1.35
SNX6-208ENST00000556712 PKHD1L1Q86WI1 4243 aa6.61□□□□□ -1.35
SNX6-208ENST00000556712 SRRM2Q9UQ35 2752 aaKnown RBP6.6□□□□□ -1.35
SNX6-208ENST00000556712 IGLV4-69A0A075B6H9 119 aa6.6□□□□□ -1.35
SNX6-208ENST00000556712 A0A096LNI7 61 aa6.6□□□□□ -1.35
SNX6-208ENST00000556712 ZNF561-AS1K7EIQ3 104 aa6.6□□□□□ -1.35
SNX6-208ENST00000556712 RHEBQ15382 184 aa6.6□□□□□ -1.35
SNX6-208ENST00000556712 C2orf66Q6UXQ4 117 aa6.6□□□□□ -1.35
SNX6-208ENST00000556712 CYSLTR1Q9Y271 337 aa6.6□□□□□ -1.35
SNX6-208ENST00000556712 FLG2Q5D862 2391 aaPredicted RBP6.59□□□□□ -1.35
SNX6-208ENST00000556712 A0A087WYN8 130 aa6.59□□□□□ -1.35
SNX6-208ENST00000556712 APOC3P02656 99 aa6.59□□□□□ -1.35
SNX6-208ENST00000556712 SPAG11BQ08648 103 aa6.59□□□□□ -1.35
SNX6-208ENST00000556712 SYCNQ0VAF6 134 aa6.59□□□□□ -1.35
SNX6-208ENST00000556712 ORMDL2Q53FV1 153 aa6.59□□□□□ -1.35
SNX6-208ENST00000556712 PYGO1Q9Y3Y4 419 aa6.59□□□□□ -1.35
SNX6-208ENST00000556712 MYCBP2O75592 4640 aa6.59□□□□□ -1.36
SNX6-208ENST00000556712 RPL37AP61513 92 aaKnown RBP6.58□□□□□ -1.36
SNX6-208ENST00000556712 MAJINQ3KP22 176 aa6.58□□□□□ -1.36
SNX6-208ENST00000556712 Q6ZRU5 148 aa6.58□□□□□ -1.36
SNX6-208ENST00000556712 LINC00173Q6ZV60 143 aa6.58□□□□□ -1.36
SNX6-208ENST00000556712 TMEM141Q96I45 108 aa6.58□□□□□ -1.36
SNX6-208ENST00000556712 GNB1LQ9BYB4 327 aa6.58□□□□□ -1.36
SNX6-208ENST00000556712 MRPL18Q9H0U6 180 aaKnown RBP6.58□□□□□ -1.36
SNX6-208ENST00000556712 NXT2Q9NPJ8 142 aaKnown RBP6.58□□□□□ -1.36
SNX6-208ENST00000556712 TGIF2-C20orf24A0A0A6YYL0 155 aa6.57□□□□□ -1.36
SNX6-208ENST00000556712 IGHV3OR16-9A0A0B4J2B5 98 aa6.57□□□□□ -1.36
SNX6-208ENST00000556712 LINC00242Q5T6M2 205 aa6.57□□□□□ -1.36
SNX6-208ENST00000556712 TEX43Q6ZNM6 134 aa6.57□□□□□ -1.36
SNX6-208ENST00000556712 ORAOV1Q8WV07 137 aa6.57□□□□□ -1.36
SNX6-208ENST00000556712 DPH3Q96FX2 82 aa6.57□□□□□ -1.36
SNX6-208ENST00000556712 CAMK2N2Q96S95 79 aa6.57□□□□□ -1.36
SNX6-208ENST00000556712 ALKBH7Q9BT30 221 aaPredicted RBP6.57□□□□□ -1.36
SNX6-208ENST00000556712 IGIPA6NJ69 53 aa6.56□□□□□ -1.36
SNX6-208ENST00000556712 APOMO95445 188 aa6.56□□□□□ -1.36
SNX6-208ENST00000556712 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
SNX6-208ENST00000556712 HNRNPA3P51991 378 aaKnown RBP6.56□□□□□ -1.36
SNX6-208ENST00000556712 PLAC8Q9NZF1 115 aa6.56□□□□□ -1.36
SNX6-208ENST00000556712 A0A0J9YXV3 536 aa6.55□□□□□ -1.36
SNX6-208ENST00000556712 K7EMI3 77 aa6.55□□□□□ -1.36
SNX6-208ENST00000556712 MT-ND6P03923 174 aa6.55□□□□□ -1.36
SNX6-208ENST00000556712 UBE2D1P51668 147 aa6.55□□□□□ -1.36
SNX6-208ENST00000556712 FABP9Q0Z7S8 132 aa6.55□□□□□ -1.36
SNX6-208ENST00000556712 COX19Q49B96 90 aa6.55□□□□□ -1.36
SNX6-208ENST00000556712 Q6ZN92 141 aa6.55□□□□□ -1.36
SNX6-208ENST00000556712 STPG4Q8N801 248 aa6.55□□□□□ -1.36
SNX6-208ENST00000556712 OR10D4PQ8NGN7 298 aa6.55□□□□□ -1.36
SNX6-208ENST00000556712 TOMM6Q96B49 74 aa6.55□□□□□ -1.36
SNX6-208ENST00000556712 AMELXQ99217 191 aa6.55□□□□□ -1.36
SNX6-208ENST00000556712 C2orf88Q9BSF0 95 aa6.55□□□□□ -1.36
SNX6-208ENST00000556712 SNAPINO95295 136 aa6.54□□□□□ -1.36
SNX6-208ENST00000556712 RPL18AQ02543 176 aaKnown RBP6.54□□□□□ -1.36
SNX6-208ENST00000556712 GAGE2BQ13066 116 aa6.54□□□□□ -1.36
SNX6-208ENST00000556712 NDUFA5Q16718 116 aa6.54□□□□□ -1.36
SNX6-208ENST00000556712 SVBPQ8N300 66 aa6.54□□□□□ -1.36
SNX6-208ENST00000556712 C2orf48Q96LS8 159 aa6.54□□□□□ -1.36
SNX6-208ENST00000556712 A0A087WZ39 114 aa6.53□□□□□ -1.36
SNX6-208ENST00000556712 LOC107984640A0A0U1RRK4 108 aa6.53□□□□□ -1.36
SNX6-208ENST00000556712 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.53□□□□□ -1.36
SNX6-208ENST00000556712 PTTG1IPP53801 180 aa6.53□□□□□ -1.36
SNX6-208ENST00000556712 C10orf25Q5T742 122 aa6.53□□□□□ -1.36
SNX6-208ENST00000556712 TIMM17AQ99595 171 aa6.53□□□□□ -1.36
SNX6-208ENST00000556712 VCX2Q9H322 139 aa6.53□□□□□ -1.36
SNX6-208ENST00000556712 LINC01546A6NGU7 62 aa6.52□□□□□ -1.37
SNX6-208ENST00000556712 UNQ6190/PRO20217Q6UXQ8 127 aa6.52□□□□□ -1.37
SNX6-208ENST00000556712 FA2HQ7L5A8 372 aa6.52□□□□□ -1.37
SNX6-208ENST00000556712 SCGB3A1Q96QR1 104 aa6.52□□□□□ -1.37
SNX6-208ENST00000556712 PKIGQ9Y2B9 76 aa6.52□□□□□ -1.37
SNX6-208ENST00000556712 TRAPPC1Q9Y5R8 145 aa6.52□□□□□ -1.37
SNX6-208ENST00000556712 NDUFA1O15239 70 aa6.51□□□□□ -1.37
SNX6-208ENST00000556712 NPSP0C0P6 89 aa6.51□□□□□ -1.37
SNX6-208ENST00000556712 KIAA0087Q14695 138 aa6.51□□□□□ -1.37
SNX6-208ENST00000556712 C2orf82Q6UX34 121 aa6.51□□□□□ -1.37
SNX6-208ENST00000556712 C18orf32Q8TCD1 76 aa6.51□□□□□ -1.37
SNX6-208ENST00000556712 URB1-AS1Q96HZ7 61 aa6.51□□□□□ -1.37
SNX6-208ENST00000556712 SMCO4Q9NRQ5 59 aa6.51□□□□□ -1.37
SNX6-208ENST00000556712 MRPL35Q9NZE8 188 aaKnown RBP6.51□□□□□ -1.37
SNX6-208ENST00000556712 C6orf48Q9UBA6 75 aa6.51□□□□□ -1.37
SNX6-208ENST00000556712 FAT3Q8TDW7 4589 aa6.5□□□□□ -1.37
SNX6-208ENST00000556712 ERASQ7Z444 233 aa6.5□□□□□ -1.37
SNX6-208ENST00000556712 FAM19A3Q7Z5A8 133 aa6.5□□□□□ -1.37
SNX6-208ENST00000556712 CBLN2Q8IUK8 224 aa6.5□□□□□ -1.37
SNX6-208ENST00000556712 C7orf33Q8WU49 177 aa6.5□□□□□ -1.37
SNX6-208ENST00000556712 YPEL4Q96NS1 127 aa6.5□□□□□ -1.37
SNX6-208ENST00000556712 LINC00474Q9P2X8 69 aa6.5□□□□□ -1.37
SNX6-208ENST00000556712 DMBT1Q9UGM3 2413 aaPredicted RBP6.5□□□□□ -1.37
SNX6-208ENST00000556712 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
SNX6-208ENST00000556712 A0A096LNJ9 63 aa6.49□□□□□ -1.37
SNX6-208ENST00000556712 A0A1W2PNN7 141 aa6.49□□□□□ -1.37
SNX6-208ENST00000556712 G0S2P27469 103 aa6.49□□□□□ -1.37
SNX6-208ENST00000556712 HERVK_113P63121 156 aa6.49□□□□□ -1.37
SNX6-208ENST00000556712 PMCHL1Q16048 86 aa6.49□□□□□ -1.37
SNX6-208ENST00000556712 RNF151Q2KHN1 245 aa6.49□□□□□ -1.37
SNX6-208ENST00000556712 PAPPA-AS1Q5QFB9 102 aa6.49□□□□□ -1.37
SNX6-208ENST00000556712 SLC7A5P1Q8MH63 180 aa6.49□□□□□ -1.37
SNX6-208ENST00000556712 TOMM7Q9P0U1 55 aa6.49□□□□□ -1.37
SNX6-208ENST00000556712 CDKN2A-AS1Q9UH64 79 aa6.49□□□□□ -1.37
SNX6-208ENST00000556712 KRTAP29-1A8MX34 341 aaPredicted RBP6.48□□□□□ -1.37
SNX6-208ENST00000556712 PRR3P79522 188 aaKnown RBP6.48□□□□□ -1.37
SNX6-208ENST00000556712 Q6ZRP5 223 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms