RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, human

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT2-223	ENST00000556689	NPY	P01303	97 aa		7.88	□□□□□ -1.15
SHMT2-223	ENST00000556689	S100A6	P06703	90 aa		7.88	□□□□□ -1.15
SHMT2-223	ENST00000556689	G0S2	P27469	103 aa		7.88	□□□□□ -1.15
SHMT2-223	ENST00000556689	COTL1	Q14019	142 aa		7.88	□□□□□ -1.15
SHMT2-223	ENST00000556689	SMIM2	Q9BVW6	85 aa		7.88	□□□□□ -1.15
SHMT2-223	ENST00000556689	AMT	P48728	403 aa		7.87	□□□□□ -1.15
SHMT2-223	ENST00000556689	RPL32	P62910	135 aa	Known RBP	7.87	□□□□□ -1.15
SHMT2-223	ENST00000556689	SMAGP	Q0VAQ4	97 aa		7.87	□□□□□ -1.15
SHMT2-223	ENST00000556689		Q6ZRP5	223 aa		7.87	□□□□□ -1.15
SHMT2-223	ENST00000556689	NRAC	Q8N912	160 aa		7.87	□□□□□ -1.15
SHMT2-223	ENST00000556689		A0A096LNI7	61 aa		7.86	□□□□□ -1.15
SHMT2-223	ENST00000556689	LOC389332	A0A1B0GUA5	103 aa		7.86	□□□□□ -1.15
SHMT2-223	ENST00000556689	ORMDL2	Q53FV1	153 aa		7.86	□□□□□ -1.15
SHMT2-223	ENST00000556689	RNASEK	Q6P5S7	137 aa	Known RBP	7.86	□□□□□ -1.15
SHMT2-223	ENST00000556689	C18orf32	Q8TCD1	76 aa		7.86	□□□□□ -1.15
SHMT2-223	ENST00000556689	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	7.86	□□□□□ -1.15
SHMT2-223	ENST00000556689	TMEM18	Q96B42	140 aa		7.86	□□□□□ -1.15
SHMT2-223	ENST00000556689	GVQW2	A0A096LPI5	108 aa	Predicted RBP	7.85	□□□□□ -1.15
SHMT2-223	ENST00000556689	TRBV27	A0A0K0K1C4	114 aa		7.85	□□□□□ -1.15
SHMT2-223	ENST00000556689		Q8N8P6	123 aa		7.85	□□□□□ -1.15
SHMT2-223	ENST00000556689	PKIG	Q9Y2B9	76 aa		7.85	□□□□□ -1.15
SHMT2-223	ENST00000556689	LPA	P08519	4548 aa		7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	LINC01549	A6NIU2	74 aa		7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	HIST1H2BK	O60814	126 aa		7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	HSBP1	O75506	76 aa		7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	HIST1H2BJ	P06899	126 aa		7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	HIST1H2BO	P23527	126 aa		7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	HIST1H2BB	P33778	126 aa		7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	HIST1H2BD	P58876	126 aa		7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	HIST1H2BC	P62807	126 aa		7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	HIST2H2BE	Q16778	126 aa		7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	AMMECR1L	Q6DCA0	310 aa		7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	HIST1H2BH	Q93079	126 aa		7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	CHCHD1	Q96BP2	118 aa	Known RBP	7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	HIST1H2BN	Q99877	126 aa		7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	HIST1H2BM	Q99879	126 aa		7.84	□□□□□ -1.15
SHMT2-223	ENST00000556689	PRSS47	A8MTI9	375 aa		7.83	□□□□□ -1.16
SHMT2-223	ENST00000556689	IFI27	P40305	119 aa	Predicted RBP	7.83	□□□□□ -1.16
SHMT2-223	ENST00000556689	LINC00614	P0C842	121 aa		7.82	□□□□□ -1.16
SHMT2-223	ENST00000556689	FOXI1	Q12951	378 aa		7.82	□□□□□ -1.16
SHMT2-223	ENST00000556689	POLR2K	P53803	58 aa	Known RBP	7.81	□□□□□ -1.16
SHMT2-223	ENST00000556689	NDUFA6	P56556	154 aa		7.81	□□□□□ -1.16
SHMT2-223	ENST00000556689	TMA7	Q9Y2S6	64 aa	Known RBP	7.81	□□□□□ -1.16
SHMT2-223	ENST00000556689	IGHV1-58	A0A0C4DH39	117 aa		7.8	□□□□□ -1.16
SHMT2-223	ENST00000556689		H7C423	109 aa		7.8	□□□□□ -1.16
SHMT2-223	ENST00000556689	SERF1A	O75920	110 aa		7.8	□□□□□ -1.16
SHMT2-223	ENST00000556689	S100A2	P29034	98 aa		7.8	□□□□□ -1.16
SHMT2-223	ENST00000556689	LINC00526	Q96FQ7	95 aa		7.8	□□□□□ -1.16
SHMT2-223	ENST00000556689	CARD19	Q96LW7	228 aa		7.8	□□□□□ -1.16
SHMT2-223	ENST00000556689	CYSLTR1	Q9Y271	337 aa		7.8	□□□□□ -1.16
SHMT2-223	ENST00000556689	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	7.79	□□□□□ -1.16
SHMT2-223	ENST00000556689	IGKV2-29	A2NJV5	120 aa	Predicted RBP	7.79	□□□□□ -1.16
SHMT2-223	ENST00000556689	TSHB	P01222	138 aa		7.79	□□□□□ -1.16
SHMT2-223	ENST00000556689	HBD	P02042	147 aa		7.79	□□□□□ -1.16
SHMT2-223	ENST00000556689	FGF6	P10767	208 aa		7.79	□□□□□ -1.16
SHMT2-223	ENST00000556689	XCL1	P47992	114 aa		7.79	□□□□□ -1.16
SHMT2-223	ENST00000556689	OR5A1	Q8NGJ0	315 aa		7.79	□□□□□ -1.16
SHMT2-223	ENST00000556689	TMEM101	Q96IK0	257 aa		7.79	□□□□□ -1.16
SHMT2-223	ENST00000556689	SYCN	Q0VAF6	134 aa		7.78	□□□□□ -1.16
SHMT2-223	ENST00000556689	PAPPA-AS1	Q5QFB9	102 aa		7.78	□□□□□ -1.16
SHMT2-223	ENST00000556689	LINC00959	A0A1B0GUT2	108 aa		7.77	□□□□□ -1.17
SHMT2-223	ENST00000556689	LINC01546	A6NGU7	62 aa		7.77	□□□□□ -1.17
SHMT2-223	ENST00000556689	ZNF561-AS1	K7EIQ3	104 aa		7.77	□□□□□ -1.17
SHMT2-223	ENST00000556689	CCL25	O15444	150 aa		7.77	□□□□□ -1.17
SHMT2-223	ENST00000556689	ZNF25	P17030	456 aa	Predicted RBP	7.77	□□□□□ -1.17
SHMT2-223	ENST00000556689	PTTG1IP	P53801	180 aa		7.77	□□□□□ -1.17
SHMT2-223	ENST00000556689	GAGE2B	Q13066	116 aa		7.77	□□□□□ -1.17
SHMT2-223	ENST00000556689		Q6ZN92	141 aa		7.77	□□□□□ -1.17
SHMT2-223	ENST00000556689	ZNF664	Q8N3J9	261 aa		7.77	□□□□□ -1.17
SHMT2-223	ENST00000556689	HSPB8	Q9UJY1	196 aa		7.77	□□□□□ -1.17
SHMT2-223	ENST00000556689		A0A1W2PNN7	141 aa		7.76	□□□□□ -1.17
SHMT2-223	ENST00000556689	COA6	Q5JTJ3	125 aa	Known RBP	7.76	□□□□□ -1.17
SHMT2-223	ENST00000556689	C2orf66	Q6UXQ4	117 aa		7.76	□□□□□ -1.17
SHMT2-223	ENST00000556689	SPANXA1	Q9NS26	97 aa		7.76	□□□□□ -1.17
SHMT2-223	ENST00000556689	PSORS1C2	Q9UIG4	136 aa		7.76	□□□□□ -1.17
SHMT2-223	ENST00000556689	LOC107984640	A0A0U1RRK4	108 aa		7.75	□□□□□ -1.17
SHMT2-223	ENST00000556689	ATP5L	O75964	103 aa		7.75	□□□□□ -1.17
SHMT2-223	ENST00000556689	SS18	Q15532	418 aa		7.75	□□□□□ -1.17
SHMT2-223	ENST00000556689	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	7.74	□□□□□ -1.17
SHMT2-223	ENST00000556689	LEPROTL1	O95214	131 aa		7.74	□□□□□ -1.17
SHMT2-223	ENST00000556689	NPS	P0C0P6	89 aa		7.74	□□□□□ -1.17
SHMT2-223	ENST00000556689	ESD	P10768	282 aa		7.74	□□□□□ -1.17
SHMT2-223	ENST00000556689	CD164L2	Q6UWJ8	174 aa		7.74	□□□□□ -1.17
SHMT2-223	ENST00000556689	TOMM6	Q96B49	74 aa		7.74	□□□□□ -1.17
SHMT2-223	ENST00000556689	PACRG	Q96M98	296 aa	Predicted RBP	7.74	□□□□□ -1.17
SHMT2-223	ENST00000556689	SCGB3A1	Q96QR1	104 aa		7.74	□□□□□ -1.17
SHMT2-223	ENST00000556689	C2orf88	Q9BSF0	95 aa		7.74	□□□□□ -1.17
SHMT2-223	ENST00000556689	PMCHL1	Q16048	86 aa		7.73	□□□□□ -1.17
SHMT2-223	ENST00000556689	PDZD11	Q5EBL8	140 aa		7.73	□□□□□ -1.17
SHMT2-223	ENST00000556689	TMEM141	Q96I45	108 aa		7.73	□□□□□ -1.17
SHMT2-223	ENST00000556689	TIMM21	Q9BVV7	248 aa		7.73	□□□□□ -1.17
SHMT2-223	ENST00000556689	MUC2	Q02817	5179 aa		7.73	□□□□□ -1.17
SHMT2-223	ENST00000556689	IGLV4-69	A0A075B6H9	119 aa		7.72	□□□□□ -1.17
SHMT2-223	ENST00000556689	SNRPE	P62304	92 aa	Known RBP	7.72	□□□□□ -1.17
SHMT2-223	ENST00000556689	C9orf116	Q5BN46	136 aa	Predicted RBP	7.72	□□□□□ -1.17
SHMT2-223	ENST00000556689	C1orf137	Q5JT78	98 aa		7.72	□□□□□ -1.17
SHMT2-223	ENST00000556689	ERAS	Q7Z444	233 aa		7.72	□□□□□ -1.17
SHMT2-223	ENST00000556689	MRPL52	Q86TS9	123 aa	Known RBP	7.72	□□□□□ -1.17
SHMT2-223	ENST00000556689	PRR26	Q8N8Z3	221 aa		7.72	□□□□□ -1.17

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