RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 C5orf38Q86SI9 138 aa1.96□□□□□ -2.1
SRP54-209ENST00000555746 ORMDL3Q8N138 153 aa1.96□□□□□ -2.1
SRP54-209ENST00000555746 Q8N2B8 174 aa1.96□□□□□ -2.1
SRP54-209ENST00000555746 FAM216BQ8N7L0 139 aa1.96□□□□□ -2.1
SRP54-209ENST00000555746 CMTM2Q8TAZ6 248 aa1.96□□□□□ -2.1
SRP54-209ENST00000555746 UBALD1Q8TB05 177 aa1.96□□□□□ -2.1
SRP54-209ENST00000555746 CAMK2N2Q96S95 79 aa1.96□□□□□ -2.1
SRP54-209ENST00000555746 SND1-IT1Q9HBX3 110 aa1.96□□□□□ -2.1
SRP54-209ENST00000555746 LY96Q9Y6Y9 160 aa1.96□□□□□ -2.1
SRP54-209ENST00000555746 HSPG2P98160 4391 aa1.96□□□□□ -2.1
SRP54-209ENST00000555746 STARD9Q9P2P6 4700 aa1.96□□□□□ -2.1
SRP54-209ENST00000555746 IGLV1-50A0A075B6I6 118 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 TRAV2A0A0B4J234 112 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 TRAV1-1A0A0B4J248 108 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 MDFIC2A0A1B0GVS7 189 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 J3QLW9 94 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 IGKV1-39P01597 117 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 IGHV3-11P01762 117 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 IGKV1-16P04430 117 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 IGKV1D-39P04432 117 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 IGHV1-8P0DP01 117 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 PIPP12273 146 aaPredicted RBP1.95□□□□□ -2.1
SRP54-209ENST00000555746 CKS2P33552 79 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 WFDC2Q14508 124 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 SS18Q15532 418 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 LINC00483Q53H64 154 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 Q5W150 140 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 SOSTDC1Q6X4U4 206 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 ATP11AUNQ6ZP68 121 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 TMEM136Q6ZRR5 245 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 COMMD6Q7Z4G1 85 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 Q8N8P6 123 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 OR8B3Q8NGG8 313 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 SCGB3A1Q96QR1 104 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 TRGV9Q99603 122 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 V9GYH0 126 aa1.95□□□□□ -2.1
SRP54-209ENST00000555746 HEATR5BQ9P2D3 2071 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 HUWE1Q7Z6Z7 4374 aaKnown RBP1.94□□□□□ -2.1
SRP54-209ENST00000555746 IGKV1-6A0A0C4DH72 117 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 CCL22O00626 93 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 NUPR1O60356 82 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 IGHV3-7P01780 117 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 SMIM13P0DJ93 91 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 PTHLHP12272 177 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 INSL4Q14641 139 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 ASB16-AS1Q495Z4 193 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 FAM104BQ5XKR9 115 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 PATE2Q6UY27 113 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 SPATA12Q7Z6I5 190 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 SERP2Q8N6R1 65 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 CLDND2Q8NHS1 167 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 CLEC2BQ92478 149 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 TVP23CQ96ET8 276 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 COX14Q96I36 57 aa1.94□□□□□ -2.1
SRP54-209ENST00000555746 FGF23Q9GZV9 251 aaPredicted RBP1.94□□□□□ -2.1
SRP54-209ENST00000555746 NXT2Q9NPJ8 142 aaKnown RBP1.94□□□□□ -2.1
SRP54-209ENST00000555746 HEATR1Q9H583 2144 aaKnown RBP1.94□□□□□ -2.1
SRP54-209ENST00000555746 IGHV3-72A0A0B4J1Y9 119 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 CXorf51AA0A1B0GTR3 108 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 SPRR5A0A1B0GTR4 108 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 E7EQL1 145 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 K7ERS5 55 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 NDUFC1O43677 76 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 ACYP1P07311 99 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 NPPCP23582 126 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 MPV17P39210 176 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 FXYD7P58549 80 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 MPV17LQ2QL34 196 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 MRPL51Q4U2R6 128 aaKnown RBP1.93□□□□□ -2.1
SRP54-209ENST00000555746 PYDC2Q56P42 97 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 NCBP2-AS2Q69YL0 99 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 NTM-AS1Q6ZSK4 140 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 AQP3Q92482 292 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 CHCHD1Q96BP2 118 aaKnown RBP1.93□□□□□ -2.1
SRP54-209ENST00000555746 OR8B2Q96RD0 313 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 ZNRD1Q9P1U0 126 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 PHLDA3Q9Y5J5 127 aa1.93□□□□□ -2.1
SRP54-209ENST00000555746 FXYD6-FXYD2A0A087WZ82 144 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 TRAV14DV4A0A0A6YYC5 116 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 IGHV3-43A0A0B4J1X8 118 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 IGHV1-24A0A0C4DH33 117 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 CRYM-AS1A6NIL9 109 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 A6NN06 94 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 SNRPGP15A8MWD9 76 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 CCKP06307 115 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 PEBP1P30086 187 aaKnown RBP1.92□□□□□ -2.1
SRP54-209ENST00000555746 SMIM11AP58511 58 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 TSPEAR-AS2P59090 65 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 SYCNQ0VAF6 134 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 KISS1Q15726 138 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 CFAP126Q5VTH2 177 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 Q6ZQT7 251 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 NABP2Q9BQ15 211 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 UPK3BQ9BT76 320 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 TTTY13Q9BZ97 58 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 FXYD6Q9H0Q3 95 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 CST11Q9H112 138 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 ZNF355PQ9NSJ1 428 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 TMEM14AQ9Y6G1 99 aa1.92□□□□□ -2.1
SRP54-209ENST00000555746 DNAH10Q8IVF4 4471 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms