RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 FAM104AQ969W3 186 aa4.8□□□□□ -1.64
LINC00640-201ENST00000554409 SEC11CQ9BY50 192 aa4.8□□□□□ -1.64
LINC00640-201ENST00000554409 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
LINC00640-201ENST00000554409 CTDSP1Q9GZU7 261 aa4.8□□□□□ -1.64
LINC00640-201ENST00000554409 TRAV9-1A0A075B6T8 112 aa4.79□□□□□ -1.64
LINC00640-201ENST00000554409 RNASE13Q5GAN3 156 aaKnown RBP4.79□□□□□ -1.64
LINC00640-201ENST00000554409 MAP1LC3AQ9H492 121 aa4.79□□□□□ -1.64
LINC00640-201ENST00000554409 PKIGQ9Y2B9 76 aa4.79□□□□□ -1.64
LINC00640-201ENST00000554409 PYGO1Q9Y3Y4 419 aa4.79□□□□□ -1.64
LINC00640-201ENST00000554409 SRRM2Q9UQ35 2752 aaKnown RBP4.78□□□□□ -1.64
LINC00640-201ENST00000554409 TRAV13-1A0A0B4J241 112 aa4.78□□□□□ -1.64
LINC00640-201ENST00000554409 ZNF561-AS1K7EIQ3 104 aa4.78□□□□□ -1.64
LINC00640-201ENST00000554409 K7EMI3 77 aa4.78□□□□□ -1.64
LINC00640-201ENST00000554409 COX7A2LO14548 114 aa4.78□□□□□ -1.64
LINC00640-201ENST00000554409 RAB5AP20339 215 aa4.78□□□□□ -1.64
LINC00640-201ENST00000554409 RPL37AP61513 92 aaKnown RBP4.78□□□□□ -1.64
LINC00640-201ENST00000554409 COX6A2Q02221 97 aa4.78□□□□□ -1.64
LINC00640-201ENST00000554409 COMMD7Q86VX2 200 aa4.78□□□□□ -1.64
LINC00640-201ENST00000554409 Q8N8P6 123 aa4.78□□□□□ -1.64
LINC00640-201ENST00000554409 CARD19Q96LW7 228 aa4.78□□□□□ -1.64
LINC00640-201ENST00000554409 PLAC8Q9NZF1 115 aa4.78□□□□□ -1.64
LINC00640-201ENST00000554409 A0A087WYN8 130 aa4.77□□□□□ -1.65
LINC00640-201ENST00000554409 IGHV3OR16-9A0A0B4J2B5 98 aa4.77□□□□□ -1.65
LINC00640-201ENST00000554409 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
LINC00640-201ENST00000554409 NPSP0C0P6 89 aa4.77□□□□□ -1.65
LINC00640-201ENST00000554409 CHTF8P0CG12 524 aa4.77□□□□□ -1.65
LINC00640-201ENST00000554409 MALP21145 153 aa4.77□□□□□ -1.65
LINC00640-201ENST00000554409 IFI27P40305 119 aaPredicted RBP4.77□□□□□ -1.65
LINC00640-201ENST00000554409 SYCNQ0VAF6 134 aa4.77□□□□□ -1.65
LINC00640-201ENST00000554409 C10orf91Q5T1B1 145 aa4.77□□□□□ -1.65
LINC00640-201ENST00000554409 OR10D4PQ8NGN7 298 aa4.77□□□□□ -1.65
LINC00640-201ENST00000554409 PRSS3P2Q8NHM4 247 aa4.77□□□□□ -1.65
LINC00640-201ENST00000554409 IGLV4-69A0A075B6H9 119 aa4.76□□□□□ -1.65
LINC00640-201ENST00000554409 IGLV4-3A0A075B6K6 122 aa4.76□□□□□ -1.65
LINC00640-201ENST00000554409 A0A096LNI7 61 aa4.76□□□□□ -1.65
LINC00640-201ENST00000554409 LOC389332A0A1B0GUA5 103 aa4.76□□□□□ -1.65
LINC00640-201ENST00000554409 IFITM10A6NMD0 228 aa4.76□□□□□ -1.65
LINC00640-201ENST00000554409 KRTAP29-1A8MX34 341 aaPredicted RBP4.76□□□□□ -1.65
LINC00640-201ENST00000554409 APOMO95445 188 aa4.76□□□□□ -1.65
LINC00640-201ENST00000554409 ORMDL2Q53FV1 153 aa4.76□□□□□ -1.65
LINC00640-201ENST00000554409 C5orf38Q86SI9 138 aa4.76□□□□□ -1.65
LINC00640-201ENST00000554409 LINC00526Q96FQ7 95 aa4.76□□□□□ -1.65
LINC00640-201ENST00000554409 TMEM141Q96I45 108 aa4.76□□□□□ -1.65
LINC00640-201ENST00000554409 C2orf48Q96LS8 159 aa4.76□□□□□ -1.65
LINC00640-201ENST00000554409 OPRPNQ99935 248 aaPredicted RBP4.76□□□□□ -1.65
LINC00640-201ENST00000554409 NXT2Q9NPJ8 142 aaKnown RBP4.76□□□□□ -1.65
LINC00640-201ENST00000554409 LINC00474Q9P2X8 69 aa4.76□□□□□ -1.65
LINC00640-201ENST00000554409 CYSLTR1Q9Y271 337 aa4.76□□□□□ -1.65
LINC00640-201ENST00000554409 CARHSP1Q9Y2V2 147 aaKnown RBP4.76□□□□□ -1.65
LINC00640-201ENST00000554409 FLG2Q5D862 2391 aaPredicted RBP4.76□□□□□ -1.65
LINC00640-201ENST00000554409 F8WDY8 70 aa4.75□□□□□ -1.65
LINC00640-201ENST00000554409 S100PP25815 95 aa4.75□□□□□ -1.65
LINC00640-201ENST00000554409 RHEBQ15382 184 aa4.75□□□□□ -1.65
LINC00640-201ENST00000554409 RNF151Q2KHN1 245 aa4.75□□□□□ -1.65
LINC00640-201ENST00000554409 MAJINQ3KP22 176 aa4.75□□□□□ -1.65
LINC00640-201ENST00000554409 COX19Q49B96 90 aa4.75□□□□□ -1.65
LINC00640-201ENST00000554409 C2orf66Q6UXQ4 117 aa4.75□□□□□ -1.65
LINC00640-201ENST00000554409 DPH3Q96FX2 82 aa4.75□□□□□ -1.65
LINC00640-201ENST00000554409 CAMK2N2Q96S95 79 aa4.75□□□□□ -1.65
LINC00640-201ENST00000554409 TGIF2-C20orf24A0A0A6YYL0 155 aa4.74□□□□□ -1.65
LINC00640-201ENST00000554409 IGKV2-24A0A0C4DH68 120 aa4.74□□□□□ -1.65
LINC00640-201ENST00000554409 LOC107984640A0A0U1RRK4 108 aa4.74□□□□□ -1.65
LINC00640-201ENST00000554409 OXTP01178 125 aa4.74□□□□□ -1.65
LINC00640-201ENST00000554409 G0S2P27469 103 aa4.74□□□□□ -1.65
LINC00640-201ENST00000554409 SPAG11BQ08648 103 aa4.74□□□□□ -1.65
LINC00640-201ENST00000554409 LINC00242Q5T6M2 205 aa4.74□□□□□ -1.65
LINC00640-201ENST00000554409 TEX43Q6ZNM6 134 aa4.74□□□□□ -1.65
LINC00640-201ENST00000554409 Q6ZRU5 148 aa4.74□□□□□ -1.65
LINC00640-201ENST00000554409 STPG4Q8N801 248 aa4.74□□□□□ -1.65
LINC00640-201ENST00000554409 C7orf33Q8WU49 177 aa4.74□□□□□ -1.65
LINC00640-201ENST00000554409 AMELXQ99217 191 aa4.74□□□□□ -1.65
LINC00640-201ENST00000554409 GNB1LQ9BYB4 327 aa4.74□□□□□ -1.65
LINC00640-201ENST00000554409 DMBT1Q9UGM3 2413 aaPredicted RBP4.74□□□□□ -1.65
LINC00640-201ENST00000554409 A0A087WZ39 114 aa4.73□□□□□ -1.65
LINC00640-201ENST00000554409 LINC01546A6NGU7 62 aa4.73□□□□□ -1.65
LINC00640-201ENST00000554409 IGIPA6NJ69 53 aa4.73□□□□□ -1.65
LINC00640-201ENST00000554409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.73□□□□□ -1.65
LINC00640-201ENST00000554409 MT-ND6P03923 174 aa4.73□□□□□ -1.65
LINC00640-201ENST00000554409 UBE2D1P51668 147 aa4.73□□□□□ -1.65
LINC00640-201ENST00000554409 HNRNPA3P51991 378 aaKnown RBP4.73□□□□□ -1.65
LINC00640-201ENST00000554409 PTTG1IPP53801 180 aa4.73□□□□□ -1.65
LINC00640-201ENST00000554409 KIAA1644Q3SXP7 199 aa4.73□□□□□ -1.65
LINC00640-201ENST00000554409 Q6ZN92 141 aa4.73□□□□□ -1.65
LINC00640-201ENST00000554409 LINC00173Q6ZV60 143 aa4.73□□□□□ -1.65
LINC00640-201ENST00000554409 FAM19A3Q7Z5A8 133 aa4.73□□□□□ -1.65
LINC00640-201ENST00000554409 LINC01561Q8N1V8 128 aa4.73□□□□□ -1.65
LINC00640-201ENST00000554409 ORAOV1Q8WV07 137 aa4.73□□□□□ -1.65
LINC00640-201ENST00000554409 TIMM17AQ99595 171 aa4.73□□□□□ -1.65
LINC00640-201ENST00000554409 C2orf88Q9BSF0 95 aa4.73□□□□□ -1.65
LINC00640-201ENST00000554409 MRPL35Q9NZE8 188 aaKnown RBP4.73□□□□□ -1.65
LINC00640-201ENST00000554409 LINC01549A6NIU2 74 aa4.72□□□□□ -1.65
LINC00640-201ENST00000554409 PAPPA-AS1Q5QFB9 102 aa4.72□□□□□ -1.65
LINC00640-201ENST00000554409 TOMM6Q96B49 74 aa4.72□□□□□ -1.65
LINC00640-201ENST00000554409 ALKBH7Q9BT30 221 aaPredicted RBP4.72□□□□□ -1.65
LINC00640-201ENST00000554409 RPS10P5Q9NQ39 176 aa4.72□□□□□ -1.65
LINC00640-201ENST00000554409 NDUFA1O15239 70 aa4.71□□□□□ -1.66
LINC00640-201ENST00000554409 TLX1NBP0CAT3 122 aa4.71□□□□□ -1.66
LINC00640-201ENST00000554409 PRR3P79522 188 aaKnown RBP4.71□□□□□ -1.66
LINC00640-201ENST00000554409 GAGE2BQ13066 116 aa4.71□□□□□ -1.66
LINC00640-201ENST00000554409 KIAA0087Q14695 138 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms